Search Results - "Jakob, H."

Convex optimization problem prototyping for image reconstruction in computed tomography with the Chambolle-Pock algorithm by Sidky, Emil Y, Jørgensen, Jakob H, Pan, Xiaochuan

“…The primal-dual optimization algorithm developed in Chambolle and Pock (CP) (2011 J. Math. Imag. Vis. 40 1-26) is applied to various convex optimization…”
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Painfree and accurate Bayesian estimation of psychometric functions for (potentially) overdispersed data by Schütt, Heiko H., Harmeling, Stefan, Macke, Jakob H., Wichmann, Felix A.

“…The psychometric function describes how an experimental variable, such as stimulus strength, influences the behaviour of an observer. Estimation of…”
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Real-Time Gravitational Wave Science with Neural Posterior Estimation by Dax, Maximilian, Green, Stephen R, Gair, Jonathan, Macke, Jakob H, Buonanno, Alessandra, Schölkopf, Bernhard

“…We demonstrate unprecedented accuracy for rapid gravitational wave parameter estimation with deep learning. Using neural networks as surrogates for Bayesian…”
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Neural population coding: combining insights from microscopic and mass signals by Panzeri, Stefano, Macke, Jakob H, Gross, Joachim, Kayser, Christoph

“…Highlights • Neural population codes are organized at multiple spatial scales. • Microscopic organization of neural codes reveals a key role of neural…”
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Outlier SNP markers reveal fine‐scale genetic structuring across European hake populations (Merluccius merluccius) by Milano, Ilaria, Babbucci, Massimiliano, Cariani, Alessia, Atanassova, Miroslava, Bekkevold, Dorte, Carvalho, Gary R, Espiñeira, Montserrat, Fiorentino, Fabio, Garofalo, Germana, Geffen, Audrey J, Hansen, Jakob. H, Helyar, Sarah J, Nielsen, Einar E, Ogden, Rob, Patarnello, Tomaso, Stagioni, Marco, Tinti, Fausto, Bargelloni, Luca

“…Shallow population structure is generally reported for most marine fish and explained as a consequence of high dispersal, connectivity and large population…”
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BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins by van Heel, Auke J, de Jong, Anne, Song, Chunxu, Viel, Jakob H, Kok, Jan, Kuipers, Oscar P

“…Abstract Interest in secondary metabolites such as RiPPs (ribosomally synthesized and posttranslationally modified peptides) is increasing worldwide. To…”
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Neural Importance Sampling for Rapid and Reliable Gravitational-Wave Inference by Dax, Maximilian, Green, Stephen R, Gair, Jonathan, Pürrer, Michael, Wildberger, Jonas, Macke, Jakob H, Buonanno, Alessandra, Schölkopf, Bernhard

“…We combine amortized neural posterior estimation with importance sampling for fast and accurate gravitational-wave inference. We first generate a rapid…”
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Air pollution and family related determinants of asthma onset and persistent wheezing in children: nationwide case-control study by Holst, Gitte J, Pedersen, Carsten B, Thygesen, Malene, Brandt, Jørgen, Geels, Camilla, Bønløkke, Jakob H, Sigsgaard, Torben

“…Abstract Objective To identify risk factors (air pollution and family related) for the onset of asthma and persistent wheezing in children. Design Nationwide…”
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Deep learning‐based digitization of prostate brachytherapy needles in ultrasound images by Andersén, Christoffer, Rydén, Tobias, Thunberg, Per, Lagerlöf, Jakob H.

“…Purpose To develop, and evaluate the performance of, a deep learning‐based three‐dimensional (3D) convolutional neural network (CNN) artificial intelligence…”
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Arctic warming interrupts the Transpolar Drift and affects long-range transport of sea ice and ice-rafted matter by Krumpen, Thomas, Belter, H. Jakob, Boetius, Antje, Damm, Ellen, Haas, Christian, Hendricks, Stefan, Nicolaus, Marcel, Nöthig, Eva-Maria, Paul, Stephan, Peeken, Ilka, Ricker, Robert, Stein, Rüdiger

“…Sea ice is an important transport vehicle for gaseous, dissolved and particulate matter in the Arctic Ocean. Due to the recently observed acceleration in sea…”
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Trained recurrent neural networks develop phase-locked limit cycles in a working memory task by Pals, Matthijs, Macke, Jakob H, Barak, Omri

“…Neural oscillations are ubiquitously observed in many brain areas. One proposed functional role of these oscillations is that they serve as an internal clock,…”
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Flexible and efficient simulation-based inference for models of decision-making by Boelts, Jan, Lueckmann, Jan-Matthis, Gao, Richard, Macke, Jakob H

“…Inferring parameters of computational models that capture experimental data is a central task in cognitive neuroscience. Bayesian statistical inference methods…”
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Machine learning can identify newly diagnosed patients with CLL at high risk of infection by Agius, Rudi, Brieghel, Christian, Andersen, Michael A., Pearson, Alexander T., Ledergerber, Bruno, Cozzi-Lepri, Alessandro, Louzoun, Yoram, Andersen, Christen L., Bergstedt, Jacob, von Stemann, Jakob H., Jørgensen, Mette, Tang, Man-Hung Eric, Fontes, Magnus, Bahlo, Jasmin, Herling, Carmen D., Hallek, Michael, Lundgren, Jens, MacPherson, Cameron Ross, Larsen, Jan, Niemann, Carsten U.

“…Infections have become the major cause of morbidity and mortality among patients with chronic lymphocytic leukemia (CLL) due to immune dysfunction and…”
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Mask mandates save lives by Hansen, Niels-Jakob H., Mano, Rui C.

“…We quantify the effect of statewide mask mandates in the United States in 2020. Our regression discontinuity design exploits county-level variation in COVID-19…”
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What about honey bee jelly? Pesticide residues in larval food jelly of the Western honey bee Apis mellifera by Wueppenhorst, Karoline, Eckert, Jakob H., Steinert, Michael, Erler, Silvio

“…The increasing loss of honey bee colonies is assumed to be caused by various factors such as habitat degradation, parasites, pathogens, or the exposure to…”
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Inferring decoding strategies from choice probabilities in the presence of correlated variability by Haefner, Ralf M, Gerwinn, Sebastian, Macke, Jakob H, Bethge, Matthias

“…Here the authors derive the mathematical relationship among the key ingredients of the standard neural decision-making model: choice probabilities, read-out…”
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Training deep neural density estimators to identify mechanistic models of neural dynamics by Gonçalves, Pedro J, Lueckmann, Jan-Matthis, Deistler, Michael, Nonnenmacher, Marcel, Öcal, Kaan, Bassetto, Giacomo, Chintaluri, Chaitanya, Podlaski, William F, Haddad, Sara A, Vogels, Tim P, Greenberg, David S, Macke, Jakob H

“…Mechanistic modeling in neuroscience aims to explain observed phenomena in terms of underlying causes. However, determining which model parameters agree with…”
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Choice (-history) correlations in sensory cortex: cause or consequence? by Macke, Jakob H, Nienborg, Hendrikje

“…•Linking correlations between neural activity in sensory cortex and perceptual choices to causal mechanisms remains a challenge.•Choice-correlations likely…”
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Energy-efficient network activity from disparate circuit parameters by Deistler, Michael, Macke, Jakob H, Gonçalves, Pedro J

“…Neural circuits can produce similar activity patterns from vastly different combinations of channel and synaptic conductances. These conductances are tuned for…”
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Impact of microorganisms and entomopathogenic nematodes used for plant protection on solitary and social bee pollinators: Host range, specificity, pathogenicity, toxicity, and effects of experimental parameters by Erler, Silvio, Eckert, Jakob H., Steinert, Michael, Alkassab, Abdulrahim T.

“…Pollinating bees are stressed by highly variable environmental conditions, malnutrition, parasites and pathogens, but may also by getting in contact with…”
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