Search Results - "Jacobs, Sharoni"

SARS-CoV-2 variant Delta rapidly displaced variant Alpha in the United States and led to higher viral loads by Bolze, Alexandre, Luo, Shishi, White, Simon, Cirulli, Elizabeth T., Wyman, Dana, Dei Rossi, Andrew, Machado, Henrique, Cassens, Tyler, Jacobs, Sharoni, Schiabor Barrett, Kelly M., Tanudjaja, Francisco, Tsan, Kevin, Nguyen, Jason, Ramirez, Jimmy M., Sandoval, Efren, Wang, Xueqing, Wong, David, Becker, David, Laurent, Marc, Lu, James T., Isaksson, Magnus, Washington, Nicole L., Lee, William

“…We report on the sequencing of 74,348 SARS-CoV-2 positive samples collected across the United States and show that the Delta variant, first detected in the…”
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High-Resolution Single Nucleotide Polymorphism Array Analysis of Epithelial Ovarian Cancer Reveals Numerous Microdeletions and Amplifications by GORRINGE, Kylie L, JACOBS, Sharoni, THOMPSON, Ella R, SRIDHAR, Anita, WEN QIU, CHOONG, David Y. H, CAMPBELL, Lan G

“…Purpose: Genetic changes in sporadic ovarian cancer are relatively poorly characterized compared with other tumor types. We have evaluated the use of…”
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Retinoic Acid Is Required Early during Adult Neurogenesis in the Dentate Gyrus by Jacobs, Sharoni, Lie, D. Chichung, DeCicco, Kathleen L., Shi, Yanhong, DeLuca, Luigi M., Gage, Fred H., Evans, Ronald M.

“…Retinoic acid (RA) is commonly used in vitro to differentiate stem cell populations including adult neural stem cells into neurons; however, the in vivo…”
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Genome-wide, high-resolution detection of copy number, loss of heterozygosity, and genotypes from formalin-fixed, paraffin-embedded tumor tissue using microarrays by JACOBS, Sharoni, THOMPSON, Ella R, NANNYA, Yasuhito, YAMAMOTO, Go, PILLAI, Raji, OGAWA, Seishi, BAILEY, Dione K, CAMPBELL, Ian G

“…Formalin-fixed, paraffin-embedded (FFPE) material tends to yield degraded DNA and is thus suboptimal for use in many downstream applications. We describe an…”
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A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array by Yu, Tianwei, Ye, Hui, Sun, Wei, Li, Ker-Chau, Chen, Zugen, Jacobs, Sharoni, Bailey, Dione K, Wong, David T, Zhou, Xiaofeng

“…DNA copy number aberration (CNA) is one of the key characteristics of cancer cells. Recent studies demonstrated the feasibility of utilizing high density…”
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Emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States by Washington, Nicole L., Gangavarapu, Karthik, Zeller, Mark, Bolze, Alexandre, Cirulli, Elizabeth T., Schiabor Barrett, Kelly M., Larsen, Brendan B., Anderson, Catelyn, White, Simon, Cassens, Tyler, Jacobs, Sharoni, Levan, Geraint, Nguyen, Jason, Ramirez, Jimmy M., Rivera-Garcia, Charlotte, Sandoval, Efren, Wang, Xueqing, Wong, David, Spencer, Emily, Robles-Sikisaka, Refugio, Kurzban, Ezra, Hughes, Laura D., Deng, Xianding, Wang, Candace, Servellita, Venice, Valentine, Holly, De Hoff, Peter, Seaver, Phoebe, Sathe, Shashank, Gietzen, Kimberly, Sickler, Brad, Antico, Jay, Hoon, Kelly, Liu, Jingtao, Harding, Aaron, Bakhtar, Omid, Basler, Tracy, Austin, Brett, MacCannell, Duncan, Isaksson, Magnus, Febbo, Phillip G., Becker, David, Laurent, Marc, McDonald, Eric, Yeo, Gene W., Knight, Rob, Laurent, Louise C., de Feo, Eileen, Worobey, Michael, Chiu, Charles Y., Suchard, Marc A., Lu, James T., Lee, William, Andersen, Kristian G.

“…The highly transmissible B.1.1.7 variant of SARS-CoV-2, first identified in the United Kingdom, has gained a foothold across the world. Using S gene target…”
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Sample processing considerations for detecting copy number changes in formalin-fixed, paraffin-embedded tissues by Jacobs, Sharoni

“…The Whole Genome Sampling Analysis (WGSA) assay in combination with Affymetrix GeneChip Mapping Arrays is used for copy number analysis of high-quality DNA…”
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eP335: Genetic testing for APOB, LDLR, PCSK9, and LDLRAP1 suggest that FH testing may be underutilized by Collins, Christin, Mathur, Abhinav, Sharma, Lavania, Jacobs, Sharoni, Levin, Elissa, Hegde, Madhuri

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Data analysis considerations for detecting copy number changes in formalin-fixed, paraffin-embedded tissues by Jacobs, Sharoni

“…The Whole Genome Sampling Analysis (WGSA) assay in combination with Affymetrix GeneChip Mapping Arrays is used for copy number analysis of high-quality DNA…”
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eP412 - Genetic screening of a reportedly healthy population for familial hypercholesterolemia by Collins, Christin, Mathur, Abhinav, Ma, Zeqiang, Sharma, Lavania, Jacobs, Sharoni, Levin, Elissa, Hegde, Madhuri

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Genetic screening of a reportedly healthy population for familial hypercholesterolemia by Collins, Christin, Mathur, Abhinav, Ma, Zeqiang, Sharma, Lavania, Jacobs, Sharoni, Levin, Elissa, Hegde, Madhuri

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Evidence for SARS-CoV-2 Delta and Omicron co-infections and recombination by Bolze, Alexandre, Basler, Tracy, White, Simon, Dei Rossi, Andrew, Wyman, Dana, Dai, Hang, Roychoudhury, Pavitra, Greninger, Alexander L, Hayashibara, Kathleen, Beatty, Mark, Shah, Seema, Stous, Sarah, McCrone, John T, Kil, Eric, Cassens, Tyler, Tsan, Kevin, Nguyen, Jason, Ramirez, Jimmy, Carter, Scotty, Cirulli, Elizabeth T, Schiabor Barrett, Kelly, Washington, Nicole L, Belda-Ferre, Pedro, Jacobs, Sharoni, Sandoval, Efren, Becker, David, Lu, James T, Isaksson, Magnus, Lee, William, Luo, Shishi

“…Between November 2021 and February 2022, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Delta and Omicron variants co-circulated in the United…”
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Abstract C10: Complete genome sequencing of complex tumors and matched normals results in sensitive detection of somatic events by Jacobs, Sharoni, Baccash, Jonathon, Ghosh, Srinka, Nilsen, Geoff, Pant, Krishna

“…Abstract For a comprehensive understanding of the tumor genome, it is important to identify all somatic event types: point mutations, small insertions and…”
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Abstract 4955: Advances in gene expression microarray profiling from small amounts of adenocarcinoma and normal total RNA samples by Lucas, Anne Bergstrom, Lin, Gary, Mullinax, Becky, Jacobs, Sharoni, Fulmer-Smentek, Stephanie

“…Abstract Gene expression profiling by microarray analysis provides an important avenue for understanding biological mechanisms, classifying tissue and tumor…”
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