Search Results - "Isaacson, A"
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A convergent reaction-diffusion master equation
Published in The Journal of chemical physics (07-08-2013)“…The reaction-diffusion master equation (RDME) is a lattice stochastic reaction-diffusion model that has been used to study spatially distributed cellular…”
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An unstructured mesh convergent reaction–diffusion master equation for reversible reactions
Published in Journal of computational physics (01-12-2018)“…The convergent reaction–diffusion master equation (CRDME) was recently developed to provide a lattice particle-based stochastic reaction–diffusion model that…”
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THE REACTION-DIFFUSION MASTER EQUATION AS AN ASYMPTOTIC APPROXIMATION OF DIFFUSION TO A SMALL TARGET
Published in SIAM journal on applied mathematics (01-01-2009)“…The reaction-diffusion master equation (RDME) has recently been used as a model for biological systems in which both noise in the chemical reaction process and…”
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The promise of big data for precision population health management in the US
Published in Public health (London) (01-08-2020)“…As we enter the year 2020, health data in the United States (US) is still in the process of being curated into a usable format. With coordinated data systems,…”
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Catalyst: Fast and flexible modeling of reaction networks
Published in PLoS computational biology (18-10-2023)“…We introduce Catalyst.jl, a flexible and feature-filled Julia library for modeling and high-performance simulation of chemical reaction networks (CRNs)…”
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Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus
Published in PLoS computational biology (16-11-2020)“…For a chemical signal to propagate across a cell, it must navigate a tortuous environment involving a variety of organelle barriers. In this work we study…”
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The influence of volume exclusion by chromatin on the time required to find specific DNA binding sites by diffusion
Published in Proceedings of the National Academy of Sciences - PNAS (01-03-2011)“…Within the nuclei of eukaryotic cells, the density of chromatin is nonuniform. We study the influence of this nonuniform density, which we derive from…”
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Reaction-diffusion master equation, diffusion-limited reactions, and singular potentials
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-12-2009)“…To model biochemical systems in which both noise in the chemical reaction process and spatial movement of molecules is important, both the reaction-diffusion…”
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How Retroactivity Affects the Behavior of Incoherent Feedforward Loops
Published in iScience (18-12-2020)“…An incoherent feedforward loop (IFFL) is a network motif known for its ability to accelerate responses and generate pulses. It remains an open question to…”
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Prostatic artery embolization peri-procedural pharmacologic agents: what the interventional radiologist should know
Published in Journal of vascular and interventional radiology (01-03-2016)Get full text
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Prostatic artery embolization and its efficacy in the reduction of nocturia
Published in Journal of vascular and interventional radiology (01-03-2016)Get full text
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Symptomatic improvement after prostatic artery embolization in patients with median lobe protrusion
Published in Journal of vascular and interventional radiology (01-03-2016)Get full text
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Survey of US men inquiring about prostatic artery embolization: characterization of a potential patient cohort
Published in Journal of vascular and interventional radiology (01-02-2015)Get full text
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Short- to mid-term safety and efficacy of prostatic artery embolization: a systematic review
Published in Journal of vascular and interventional radiology (01-02-2015)Get full text
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Cone-beam CT during prostatic artery embolization: a necessary adjunct to DSA to prevent complication
Published in Journal of vascular and interventional radiology (01-02-2015)Get full text
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A First-Passage Kinetic Monte Carlo method for reaction–drift–diffusion processes
Published in Journal of computational physics (15-02-2014)“…Stochastic reaction–diffusion models are now a popular tool for studying physical systems in which both the explicit diffusion of molecules and noise in the…”
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