Search Results - "Inman, Jason M."

Supragingival Plaque Microbiome Ecology and Functional Potential in the Context of Health and Disease by Espinoza, Josh L, Harkins, Derek M, Torralba, Manolito, Gomez, Andres, Highlander, Sarah K, Jones, Marcus B, Leong, Pamela, Saffery, Richard, Bockmann, Michelle, Kuelbs, Claire, Inman, Jason M, Hughes, Toby, Craig, Jeffrey M, Nelson, Karen E, Dupont, Chris L

“…To address the question of how microbial diversity and function in the oral cavities of children relates to caries diagnosis, we surveyed the supragingival…”
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PanACEA: a bioinformatics tool for the exploration and visualization of bacterial pan-chromosomes by Clarke, Thomas H, Brinkac, Lauren M, Inman, Jason M, Sutton, Granger, Fouts, Derrick E

“…Bacterial pan-genomes, comprised of conserved and variable genes across multiple sequenced bacterial genomes, allow for identification of genomic regions that…”
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Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus by Fedorova, Natalie D, Khaldi, Nora, Joardar, Vinita S, Maiti, Rama, Amedeo, Paolo, Anderson, Michael J, Crabtree, Jonathan, Silva, Joana C, Badger, Jonathan H, Albarraq, Ahmed, Angiuoli, Sam, Bussey, Howard, Bowyer, Paul, Cotty, Peter J, Dyer, Paul S, Egan, Amy, Galens, Kevin, Fraser-Liggett, Claire M, Haas, Brian J, Inman, Jason M, Kent, Richard, Lemieux, Sebastien, Malavazi, Iran, Orvis, Joshua, Roemer, Terry, Ronning, Catherine M, Sundaram, Jaideep P, Sutton, Granger, Turner, Geoff, Venter, J Craig, White, Owen R, Whitty, Brett R, Youngman, Phil, Wolfe, Kenneth H, Goldman, Gustavo H, Wortman, Jennifer R, Jiang, Bo, Denning, David W, Nierman, William C

“…We present the genome sequences of a new clinical isolate of the important human pathogen, Aspergillus fumigatus, A1163, and two closely related but rarely…”
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Ergatis: a web interface and scalable software system for bioinformatics workflows by Orvis, Joshua, Crabtree, Jonathan, Galens, Kevin, Gussman, Aaron, Inman, Jason M., Lee, Eduardo, Nampally, Sreenath, Riley, David, Sundaram, Jaideep P., Felix, Victor, Whitty, Brett, Mahurkar, Anup, Wortman, Jennifer, White, Owen, Angiuoli, Samuel V.

“…Motivation: The growth of sequence data has been accompanied by an increasing need to analyze data on distributed computer clusters. The use of these systems…”
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Amine-modified random primers to label probes for DNA microarrays by XIANG, Charlie C, KOZHICH, Olga A, MEI CHEN, INMAN, Jason M, PHAN, Quang N, YIDONG CHEN, BROWNSTEIN, Michael J

“…DNA microarrays have been used to study the expression of thousands of genes at the same time in a variety of cells and tissues. The methods most commonly used…”
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Large-scale comparative analysis of microbial pan-genomes using PanOCT by Inman, Jason M, Sutton, Granger G, Beck, Erin, Brinkac, Lauren M, Clarke, Thomas H, Fouts, Derrick E

“…Abstract Summary The JCVI pan-genome pipeline is a collection of programs to run PanOCT and tools that support and extend the capabilities of PanOCT. PanOCT…”
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Amine-modified random primers to label probes for DNA microarrays by Brownstein, Michael J, Xiang, Charlie C, Kozhich, Olga A, Chen, Mei, Inman, Jason M, Phan, Quang N, Chen, Yidong

“…DNA microarrays have been used to study the expression of thousands of genes at the same time in a variety of cells and tissues. The methods most commonly used…”
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Pathema: a clade-specific bioinformatics resource center for pathogen research by Brinkac, Lauren M, Davidsen, Tanja, Beck, Erin, Ganapathy, Anuradha, Caler, Elisabet, Dodson, Robert J, Durkin, A. Scott, Harkins, Derek M, Lorenzi, Hernan, Madupu, Ramana, Sebastian, Yinong, Shrivastava, Susmita, Thiagarajan, Mathangi, Orvis, Joshua, Sundaram, Jaideep P, Crabtree, Jonathon, Galens, Kevin, Zhao, Yongmei, Inman, Jason M, Montgomery, Robert, Schobel, Seth, Galinsky, Kevin, Tanenbaum, David M, Resnick, Adam, Zafar, Nikhat, White, Owen, Sutton, Granger

“…Pathema (http://pathema.jcvi.org) is one of the eight Bioinformatics Resource Centers (BRCs) funded by the National Institute of Allergy and Infectious Disease…”
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A new strategy to amplify degraded RNA from small tissue samples for microarray studies by Xiang, Charlie C., Chen, Mei, Ma, Li, Phan, Quang N., Inman, Jason M., Kozhich, Olga A., Brownstein, Michael J.

“…RNA amplification methods have been used to facilitate making probes from small tissue samples for microarray studies. Our original amplification technique…”
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Sensitive and specific method for detecting G protein-coupled receptor mRNAs by Hansen, Arne, Brownstein, Michael J, Chen, Yidong, Inman, Jason M, Phan, Quang N, Qi, Zhi-Qing, Xiang, Charlie C, Palkovits, Miklos, Cherman, Natasha, Kuznetsov, Sergei A, Robey, Pamela G, Mezey, Eva

“…G protein-coupled receptors (GPCRs) mediate effects of extracellular signaling molecules in all the body's cells. These receptors are encoded by scarce mRNAs;…”
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Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus: e1000046 by Fedorova, Natalie D, Khaldi, Nora, Joardar, Vinita S, Maiti, Rama, Amedeo, Paolo, Anderson, Michael J, Crabtree, Jonathan, Silva, Joana C, Badger, Jonathan H, Albarraq, Ahmed, Angiuoli, Sam, Bussey, Howard, Bowyer, Paul, Cotty, Peter J, Dyer, Paul S, Egan, Amy, Galens, Kevin, Fraser-Liggett, Claire M, Haas, Brian J, Inman, Jason M, Kent, Richard, Lemieux, Sebastien, Malavazi, Iran, Orvis, Joshua, Roemer, Terry, Ronning, Catherine M, Sundaram, Jaideep P, Sutton, Granger, Turner, Geoff, Venter, J Craig, White, Owen R, Whitty, Brett R, Youngman, Phil, Wolfe, Kenneth H, Goldman, Gustavo H, Wortman, Jennifer R, Jiang, Bo, Denning, David W, Nierman, William C

“…We present the genome sequences of a new clinical isolate of the important human pathogen, Aspergillus fumigatus, A1163, and two closely related but rarely…”
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Suppressive effect of spinal dorsal-horn neuronal activity by local spinal-cord cooling is reversed by naloxone in cats by Dai, Min, Sumida, Toshinobu, Tagami, Megumi, Ide, Yasuo, Nagase, Masaki, Sekiyama, Hiroshi, Hanaoka, Kazuo

“…The purpose of this study was to assess the effect of local spinal cord cooling on spinal dorsal-horn neuronal activity, with special emphasis on the role of…”
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Amine-modified random primers to label probes for DNA microarrays by Xiang, Charlie C, Kozhich, Olga A, Chen, Mei, Inman, Jason M, Phan, Quang N, Chen, Yidong, Brownstein, Michael J

“…DNA microarrays have been used to study the expression of thousands of genes at the same time in a variety of cells and tissues. The methods most commonly used…”
Get full text