Search Results - "Ingham, Colin J"

Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis by Gavriilidou, Asimenia, Gutleben, Johanna, Versluis, Dennis, Forgiarini, Francesca, van Passel, Mark W J, Ingham, Colin J, Smidt, Hauke, Sipkema, Detmer

“…Members of the bacterial family Flavobacteriaceae are widely distributed in the marine environment and often found associated with algae, fish, detritus or…”
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Where bio meets nano: The many uses for nanoporous aluminum oxide in biotechnology by Ingham, Colin J., ter Maat, Jurjen, de Vos, Willem M.

“…Porous aluminum oxide (PAO) is a ceramic formed by an anodization process of pure aluminum that enables the controllable assembly of exceptionally dense and…”
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Streamlined CRISPR genome engineering in wild-type bacteria using SIBR-Cas by Patinios, Constantinos, Creutzburg, Sjoerd C A, Arifah, Adini Q, Adiego-Pérez, Belén, Gyimah, Evans A, Ingham, Colin J, Kengen, Servé W M, van der Oost, John, Staals, Raymond H J

“…Abstract CRISPR-Cas is a powerful tool for genome editing in bacteria. However, its efficacy is dependent on host factors (such as DNA repair pathways) and/or…”
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Genetic manipulation of structural color in bacterial colonies by Johansen, Villads Egede, Catón, Laura, Hamidjaja, Raditijo, Oosterink, Els, Wilts, Bodo D., Rasmussen, Torben Sølbeck, Sherlock, Michael Mario, Ingham, Colin J., Vignolini, Silvia

“…Naturally occurring photonic structures are responsible for the bright and vivid coloration in a large variety of living organisms. Despite efforts to…”
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Mutually facilitated dispersal between the nonmotile fungus Aspergillus fumigatus and the swarming bacterium Paenibacillus vortex by Ingham, Colin J, Kalisman, Oren, Finkelshtein, Alin, Ben-Jacob, Eshel

“…In the heterogeneous environment surrounding plant roots (the rhizosphere), microorganisms both compete and cooperate. Here, we show that two very different…”
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Bacterial swarms recruit cargo bacteria to pave the way in toxic environments by Finkelshtein, Alin, Roth, Dalit, Ben Jacob, Eshel, Ingham, Colin J

“…Swarming bacteria are challenged by the need to invade hostile environments. Swarms of the flagellated bacterium Paenibacillus vortex can collectively…”
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micro-Petri dish, a million-well growth chip for the culture and high-throughput screening of microorganisms by Ingham, Colin J, Sprenkels, Ad, Bomer, Johan, Molenaar, Douwe, van den Berg, Albert, van Hylckama Vlieg, Johan E.T, de Vos, Willem M

“…A miniaturized, disposable microbial culture chip has been fabricated by microengineering a highly porous ceramic sheet with up to one million growth…”
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Mixed-Culture Transcriptome Analysis Reveals the Molecular Basis of Mixed-Culture Growth in Streptococcus thermophilus and Lactobacillus bulgaricus by Sieuwerts, Sander, Molenaar, Douwe, van Hijum, Sacha A.F.T, Beerthuyzen, Marke, Stevens, Marc J.A, Janssen, Patrick W.M, Ingham, Colin J, de Bok, Frank A.M, de Vos, Willem M, van Hylckama Vlieg, Johan E.T

“…Many food fermentations are performed using mixed cultures of lactic acid bacteria. Interactions between strains are of key importance for the performance of…”
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Does Structural Color Exist in True Fungi? by Brodie, Juliet, Ingham, Colin J, Vignolini, Silvia

“…Structural color occurs by the interaction of light with regular structures and so generates colors by completely different optical mechanisms to dyes and…”
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Swarming and complex pattern formation in Paenibacillus vortex studied by imaging and tracking cells by Ingham, C.J, Jacob, E. Ben

“…Swarming motility allows microorganisms to move rapidly over surfaces. The Gram-positive bacterium Paenibacillus vortex exhibits advanced cooperative motility…”
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Microcolony imaging of Aspergillus fumigatus treated with echinocandins reveals both fungistatic and fungicidal activities by Ingham, Colin J, Schneeberger, Peter M

“…The echinocandins are lipopeptides that can be employed as antifungal drugs that inhibit the synthesis of 1,3-β-glucans within the fungal cell wall…”
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Physically Triggered Morphology Changes in a Novel Acremonium Isolate Cultivated in Precisely Engineered Microfabricated Environments by Catón, Laura, Yurkov, Andrey, Giesbers, Marcel, Dijksterhuis, Jan, Ingham, Colin J

“…Fungi are strongly affected by their physical environment. Microfabrication offers the possibility of creating new culture environments and ecosystems with…”
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Rapid susceptibility testing and microcolony analysis of Candida spp. cultured and imaged on porous aluminum oxide by Ingham, Colin J, Boonstra, Sjoukje, Levels, Suzanne, de Lange, Marit, Meis, Jacques F, Schneeberger, Peter M

“…Acquired resistance to antifungal agents now supports the introduction of susceptibility testing for species-drug combinations for which this was previously…”
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Isolation by Miniaturized Culture Chip of an Antarctic bacterium Aequorivita sp. with antimicrobial and anthelmintic activity by Palma Esposito, Fortunato, Ingham, Colin J., Hurtado-Ortiz, Raquel, Bizet, Chantal, Tasdemir, Deniz, de Pascale, Donatella

“…•Novel microbial isolation approach allowed the identification of a Gram-negative Antarctic bacterium belonging to the genus Aequorivita.•Aequorivita sp…”
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EstDZ3: A New Esterolytic Enzyme Exhibiting Remarkable Thermostability by Zarafeta, Dimitra, Szabo, Zalan, Moschidi, Danai, Phan, Hien, Chrysina, Evangelia D, Peng, Xu, Ingham, Colin J, Kolisis, Fragiskos N, Skretas, Georgios

“…Lipolytic enzymes that retain high levels of catalytic activity when exposed to a variety of denaturing conditions are of high importance for a number of…”
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Population Heterogeneity of Lactobacillus plantarum WCFS1 Microcolonies in Response to and Recovery from Acid Stress by Ingham, Colin J, Beerthuyzen, Marke, van Hylckama Vlieg, Johan

“…Within an isogenic microbial population in a homogenous environment, individual bacteria can still exhibit differences in phenotype. Phenotypic heterogeneity…”
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A multi-platform flow device for microbial (co-) cultivation and microscopic analysis by Hesselman, Matthijn C, Odoni, Dorett I, Ryback, Brendan M, de Groot, Suzette, van Heck, Ruben G A, Keijsers, Jaap, Kolkman, Pim, Nieuwenhuijse, David, van Nuland, Youri M, Sebus, Erik, Spee, Rob, de Vries, Hugo, Wapenaar, Marten T, Ingham, Colin J, Schroën, Karin, Martins dos Santos, Vítor A P, Spaans, Sebastiaan K, Hugenholtz, Floor, van Passel, Mark W J

“…Novel microbial cultivation platforms are of increasing interest to researchers in academia and industry. The development of materials with specialized…”
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The cell organization underlying structural colour is involved in Flavobacterium IR1 predation by Hamidjaja, Raditijo, Capoulade, Jérémie, Catón, Laura, Ingham, Colin J.

“…Flavobacterium IR1 is a gliding bacterium with a high degree of colonial organization as a 2D photonic crystal, resulting in vivid structural coloration when…”
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Simplified automated image analysis for detection and phenotyping of Mycobacterium tuberculosis on porous supports by monitoring growing microcolonies by den Hertog, Alice L, Visser, Dennis W, Ingham, Colin J, Fey, Frank H A G, Klatser, Paul R, Anthony, Richard M

“…Even with the advent of nucleic acid (NA) amplification technologies the culture of mycobacteria for diagnostic and other applications remains of critical…”
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A miniature porous aluminum oxide-based flow-cell for online water quality monitoring using bacterial sensor cells by Yagur-Kroll, Sharon, Schreuder, Erik, Ingham, Colin J., Heideman, René, Rosen, Rachel, Belkin, Shimshon

“…The use of live bacterial reporters as sensing entities in whole-cell biosensors allows the investigation of the biological effects of a tested sample, as well…”
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