Search Results - "Huihui, Jonathan"

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  1. 1

    An analytical theory to describe sequence-specific inter-residue distance profiles for polyampholytes and intrinsically disordered proteins by Huihui, Jonathan, Ghosh, Kingshuk

    Published in The Journal of chemical physics (30-04-2020)
    “…Intrinsically Disordered Proteins (IDPs), unlike folded proteins, lack a unique folded structure and rapidly interconvert among ensembles of disordered states…”
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    Journal Article
  2. 2

    Ancient thioredoxins evolved to modern-day stability–function requirement by altering native state ensemble by Modi, Tushar, Huihui, Jonathan, Ghosh, Kingshuk, Ozkan, S. Banu

    “…Thioredoxins (THRXs)—small globular proteins that reduce other proteins—are ubiquitous in all forms of life, from Archaea to mammals. Although ancestral…”
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    Journal Article
  3. 3

    Critical Comparison of MaxCal and Other Stochastic Modeling Approaches in Analysis of Gene Networks by Firman, Taylor, Huihui, Jonathan, Clark, Austin R, Ghosh, Kingshuk

    Published in Entropy (Basel, Switzerland) (17-03-2021)
    “…Learning the underlying details of a gene network with feedback is critical in designing new synthetic circuits. Yet, quantitative characterization of these…”
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    Journal Article
  4. 4
  5. 5

    Intrachain interaction topology can identify functionally similar intrinsically disordered proteins by Huihui, Jonathan, Ghosh, Kingshuk

    Published in Biophysical journal (18-05-2021)
    “…Functionally similar IDPs (intrinsically disordered proteins) often have little sequence similarity. This is in stark contrast to folded proteins and poses a…”
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    Journal Article
  6. 6

    Rules of Physical Mathematics Govern Intrinsically Disordered Proteins by Ghosh, Kingshuk, Huihui, Jonathan, Phillips, Michael, Haider, Austin

    Published in Annual review of biophysics (09-05-2022)
    “…In stark contrast to foldable proteins with a unique folded state, intrinsically disordered proteins and regions (IDPs) persist in perpetually disordered…”
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    Journal Article
  7. 7

    All-Atom Simulations Reveal Protein Charge Decoration in the Folded and Unfolded Ensemble Is Key in Thermophilic Adaptation by Sawle, Lucas, Huihui, Jonathan, Ghosh, Kingshuk

    Published in Journal of chemical theory and computation (10-10-2017)
    “…Thermophilic proteins denature at much higher temperature compared to their mesophilic homologues, in spite of high structural and sequential similarity…”
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    Journal Article
  8. 8

    Ancient thioredoxins evolved to modernday stability–function requirement by altering native state ensemble by Modi, Tushar, Huihui, Jonathan, Ghosh, Kingshuk, Ozkan, S. Banu

    “…Thioredoxins (THRXs)—small globular proteins that reduce other proteins—are ubiquitous in all forms of life, from Archaea to mammals. Although ancestral…”
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    Journal Article
  9. 9
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    Modeling Disorder in Proteins Yields Insights into the Evolution of Stability and Function by Huihui, Jonathan

    Published 01-01-2021
    “…The central dogma of molecular biology dictates that a DNA sequence codes for an RNA sequence, which in turn codes for a sequence of amino acids that comprises…”
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    Dissertation
  11. 11

    Preoperative Mapping of Nonmelanoma Skin Cancer Using Spatial Frequency Domain and Ultrasound Imaging by Rohrbach, Daniel J., BS, Muffoletto, Daniel, MS, Huihui, Jonathan, Saager, Rolf, PhD, Keymel, Kenneth, BS, Paquette, Anne, RN, BSN, Morgan, Janet, PhD, Zeitouni, Nathalie, MD, Sunar, Ulas, PhD

    Published in Academic radiology (01-02-2014)
    “…Rationale and Objectives The treatment of nonmelanoma skin cancer (NMSC) is usually by surgical excision or Mohs micrographic surgery and alternatively may…”
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    Journal Article