Search Results - "Hugo, B"

Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition by Flyamer, Ilya M., Gassler, Johanna, Imakaev, Maxim, Brandão, Hugo B., Ulianov, Sergey V., Abdennur, Nezar, Razin, Sergey V., Mirny, Leonid A., Tachibana-Konwalski, Kikuë

“…Using a single-nucleus Hi-C protocol, the authors find that spatial organization of chromatin during oocyte-to-zygote transition differs between paternal and…”
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Dynamics of CTCF- and cohesin-mediated chromatin looping revealed by live-cell imaging by Gabriele, Michele, Brandão, Hugo B, Grosse-Holz, Simon, Jha, Asmita, Dailey, Gina M, Cattoglio, Claudia, Hsieh, Tsung-Han S, Mirny, Leonid, Zechner, Christoph, Hansen, Anders S

“…Animal genomes are folded into loops and topologically associating domains (TADs) by CTCF and loop-extruding cohesins, but the live dynamics of loop formation…”
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A mechanism of cohesin‐dependent loop extrusion organizes zygotic genome architecture by Gassler, Johanna, Brandão, Hugo B, Imakaev, Maxim, Flyamer, Ilya M, Ladstätter, Sabrina, Bickmore, Wendy A, Peters, Jan‐Michael, Mirny, Leonid A, Tachibana, Kikuë

“…Fertilization triggers assembly of higher‐order chromatin structure from a condensed maternal and a naïve paternal genome to generate a totipotent embryo…”
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Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization by Finn, Elizabeth H., Pegoraro, Gianluca, Brandão, Hugo B., Valton, Anne-Laure, Oomen, Marlies E., Dekker, Job, Mirny, Leonid, Misteli, Tom

“…Several general principles of global 3D genome organization have recently been established, including non-random positioning of chromosomes and genes in the…”
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Bacillus subtilis SMC complexes juxtapose chromosome arms as they travel from origin to terminus by Wang, Xindan, Brandão, Hugo B., Le, Tung B. K., Laub, Michael T., Rudner, David Z.

“…Structural maintenance of chromosomes (SMC) complexes play critical roles in chromosome dynamics in virtually all organisms, but how they function remains…”
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Tracking and interpreting long-range chromatin interactions with super-resolution live-cell imaging by Brandão, Hugo B., Gabriele, Michele, Hansen, Anders S.

“…Mammalian genomes are organized and regulated through long-range chromatin interactions. Structural loops formed by CCCTC-binding factor (CTCF) and cohesin…”
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The cell biology of fertilization: Gamete attachment and fusion by Siu, Karen K, Serrão, Vitor Hugo B, Ziyyat, Ahmed, Lee, Jeffrey E

“…Fertilization is defined as the union of two gametes. During fertilization, sperm and egg fuse to form a diploid zygote to initiate prenatal development. In…”
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DNA-loop-extruding SMC complexes can traverse one another in vivo by Brandão, Hugo B., Ren, Zhongqing, Karaboja, Xheni, Mirny, Leonid A., Wang, Xindan

“…Chromosome organization mediated by structural maintenance of chromosomes (SMC) complexes is vital in many organisms. SMC complexes act as motors that extrude…”
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Chromosome organization by one-sided and two-sided loop extrusion by Banigan, Edward J, van den Berg, Aafke A, Brandão, Hugo B, Marko, John F, Mirny, Leonid A

“…SMC complexes, such as condensin or cohesin, organize chromatin throughout the cell cycle by a process known as loop extrusion. SMC complexes reel in DNA,…”
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A High-Throughput Image Correlation Method for Rapid Analysis of Fluorophore Photoblinking and Photobleaching Rates by Sehayek, Simon, Gidi, Yasser, Glembockyte, Viktorija, Brandão, Hugo B, François, Paul, Cosa, Gonzalo, Wiseman, Paul W

“…Super-resolution fluorescence imaging based on localization microscopy requires tuning the photoblinking properties of fluorescent dyes employed. Missing is a…”
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RNA polymerases as moving barriers to condensin loop extrusion by Brandão, Hugo B., Paul, Payel, vandenBerg, Aafke A., Rudner, David Z., Wang, Xindan, Mirny, Leonid A.

“…To separate replicated sister chromatids during mitosis, eukaryotes and prokaryotes have structural maintenance of chromosome (SMC) condensin complexes that…”
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Transcription shapes 3D chromatin organization by interacting with loop extrusion by Banigan, Edward J, Tang, Wen, van den Berg, Aafke A, Stocsits, Roman R, Wutz, Gordana, Brandão, Hugo B, Busslinger, Georg A, Peters, Jan-Michael, Mirny, Leonid A

“…Cohesin folds mammalian interphase chromosomes by extruding the chromatin fiber into numerous loops. "Loop extrusion" can be impeded by chromatin-bound…”
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DNA double-strand break end synapsis by DNA loop extrusion by Yang, Jin H., Brandão, Hugo B., Hansen, Anders S.

“…DNA double-strand breaks (DSBs) occur every cell cycle and must be efficiently repaired. Non-homologous end joining (NHEJ) is the dominant pathway for DSB…”
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Global warming and recurrent mass bleaching of corals by Hughes, Terry P., Kerry, James T., Álvarez-Noriega, Mariana, Álvarez-Romero, Jorge G., Anderson, Kristen D., Baird, Andrew H., Babcock, Russell C., Beger, Maria, Bellwood, David R., Berkelmans, Ray, Bridge, Tom C., Butler, Ian R., Byrne, Maria, Cantin, Neal E., Comeau, Steeve, Connolly, Sean R., Cumming, Graeme S., Dalton, Steven J., Diaz-Pulido, Guillermo, Eakin, C. Mark, Figueira, Will F., Gilmour, James P., Harrison, Hugo B., Heron, Scott F., Hoey, Andrew S., Hobbs, Jean-Paul A., Hoogenboom, Mia O., Kennedy, Emma V., Kuo, Chao-yang, Lough, Janice M., Lowe, Ryan J., Liu, Gang, McCulloch, Malcolm T., Malcolm, Hamish A., McWilliam, Michael J., Pandolfi, John M., Pears, Rachel J., Pratchett, Morgan S., Schoepf, Verena, Simpson, Tristan, Skirving, William J., Sommer, Brigitte, Torda, Gergely, Wachenfeld, David R., Willis, Bette L., Wilson, Shaun K.

“…During 2015–2016, record temperatures triggered a pan-tropical episode of coral bleaching, the third global-scale event since mass bleaching was first…”
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Larval Export from Marine Reserves and the Recruitment Benefit for Fish and Fisheries by Harrison, Hugo B., Williamson, David H., Evans, Richard D., Almany, Glenn R., Thorrold, Simon R., Russ, Garry R., Feldheim, Kevin A., van Herwerden, Lynne, Planes, Serge, Srinivasan, Maya, Berumen, Michael L., Jones, Geoffrey P.

“…Marine reserves, areas closed to all forms of fishing, continue to be advocated and implemented to supplement fisheries and conserve populations [1–4]…”
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Genome-wide identification, characterization and expression profile analysis of expansins gene family in sugarcane (Saccharum spp.) by Santiago, Thaís R, Pereira, Valquiria M, de Souza, Wagner R, Steindorff, Andrei S, Cunha, Bárbara A D B, Gaspar, Marília, Fávaro, Léia C L, Formighieri, Eduardo F, Kobayashi, Adilson K, C Molinari, Hugo B

“…Expansins refer to a family of closely related non-enzymatic proteins found in the plant cell wall that are involved in the cell wall loosening. In addition,…”
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XerD unloads bacterial SMC complexes at the replication terminus by Karaboja, Xheni, Ren, Zhongqing, Brandão, Hugo B., Paul, Payel, Rudner, David Z., Wang, Xindan

“…Bacillus subtilis structural maintenance of chromosomes (SMC) complexes are topologically loaded at centromeric sites adjacent to the replication origin by the…”
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Transient absorption spectroscopy using high harmonic generation: a review of ultrafast X-ray dynamics in molecules and solids by Geneaux, Romain, Marroux, Hugo J B, Guggenmos, Alexander, Neumark, Daniel M, Leone, Stephen R

“…Attosecond science opened the door to observing nuclear and electronic dynamics in real time and has begun to expand beyond its traditional grounds. Among…”
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MCM complexes are barriers that restrict cohesin-mediated loop extrusion by Dequeker, Bart J. H., Scherr, Matthias J., Brandão, Hugo B., Gassler, Johanna, Powell, Sean, Gaspar, Imre, Flyamer, Ilya M., Lalic, Aleksandar, Tang, Wen, Stocsits, Roman, Davidson, Iain F., Peters, Jan-Michael, Duderstadt, Karl E., Mirny, Leonid A., Tachibana, Kikuë

“…Eukaryotic genomes are compacted into loops and topologically associating domains (TADs) 1 – 3 , which contribute to transcription, recombination and genomic…”
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Organization and replicon interactions within the highly segmented genome of Borrelia burgdorferi by Ren, Zhongqing, Takacs, Constantin N, Brandão, Hugo B, Jacobs-Wagner, Christine, Wang, Xindan

“…Borrelia burgdorferi, a causative agent of Lyme disease, contains the most segmented bacterial genome known to date, with one linear chromosome and over twenty…”
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