Search Results - "Hollandi, Réka"

Deep Visual Proteomics defines single-cell identity and heterogeneity by Mund, Andreas, Coscia, Fabian, Kriston, András, Hollandi, Réka, Kovács, Ferenc, Brunner, Andreas-David, Migh, Ede, Schweizer, Lisa, Santos, Alberto, Bzorek, Michael, Naimy, Soraya, Rahbek-Gjerdrum, Lise Mette, Dyring-Andersen, Beatrice, Bulkescher, Jutta, Lukas, Claudia, Eckert, Mark Adam, Lengyel, Ernst, Gnann, Christian, Lundberg, Emma, Horvath, Peter, Mann, Matthias

“…Despite the availabilty of imaging-based and mass-spectrometry-based methods for spatial proteomics, a key challenge remains connecting images with…”
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AnnotatorJ: an ImageJ plugin to ease hand annotation of cellular compartments by Hollandi, Réka, Diósdi, Ákos, Hollandi, Gábor, Moshkov, Nikita, Horváth, Péter

“…AnnotatorJ combines single-cell identification with deep learning (DL) and manual annotation. Cellular analysis quality depends on accurate and reliable…”
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Genome-wide RNAi screen identifies novel players in human 60S subunit biogenesis including key enzymes of polyamine metabolism by Dörner, Kerstin, Badertscher, Lukas, Horváth, Bianka, Hollandi, Réka, Molnár, Csaba, Fuhrer, Tobias, Meier, Roger, Sárazová, Marie, van den Heuvel, Jasmin, Zamboni, Nicola, Horvath, Peter, Kutay, Ulrike

“…Abstract Ribosome assembly is an essential process that is linked to human congenital diseases and tumorigenesis. While great progress has been made in…”
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OpSeF: Open Source Python Framework for Collaborative Instance Segmentation of Bioimages by Rasse, Tobias M, Hollandi, Réka, Horvath, Peter

“…Various pre-trained deep learning models for the segmentation of bioimages have been made available as developer-to-end-user solutions. They are optimized for…”
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Failure in the compensatory mechanism in red blood cells due to sustained smoking during pregnancy by Chakraborty, Payal, Dugmonits, Krisztina N., Végh, Attila G., Hollandi, Réka, Horváth, Péter, Maléth, József, Hegyi, Péter, Németh, Gábor, Hermesz, Edit

“…Decrease in the bioavailability of vasoactive nitric oxide (NO), derived from the endothelial nitric oxide synthase (NOS3), underlines vascular endothelial…”
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α/β-Peptides as Nanomolar Triggers of Lipid Raft-Mediated Endocytosis through GM1 Ganglioside Recognition by Hetényi, Anasztázia, Szabó, Enikő, Imre, Norbert, Bhaumik, Kaushik Nath, Tököli, Attila, Füzesi, Tamás, Hollandi, Réka, Horvath, Peter, Czibula, Ágnes, Monostori, Éva, Deli, Mária A, Martinek, Tamás A

“…Cell delivery of therapeutic macromolecules and nanoparticles is a critical drug development challenge. Translocation through lipid raft-mediated endocytic…”
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Maternal Smoking Highly Affects the Function, Membrane Integrity, and Rheological Properties in Fetal Red Blood Cells by Hermesz, Edit, Horváth, Péter, Pankotai-Bodó, Gabriella, Zahorán, Szabolcs, Hollandi, Réka, Chakraborty, Payal, Dugmonits, Krisztina N., Orvos, Hajnalka

“…An understanding of the basic pathophysiological mechanisms of neonatal diseases necessitates detailed knowledge about the wide range of complications in the…”
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Test-time augmentation for deep learning-based cell segmentation on microscopy images by Moshkov, Nikita, Mathe, Botond, Kertesz-Farkas, Attila, Hollandi, Reka, Horvath, Peter

“…Recent advancements in deep learning have revolutionized the way microscopy images of cells are processed. Deep learning network architectures have a large…”
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Neuropilin-1 is a host factor for SARS-CoV-2 infection by Daly, James L, Simonetti, Boris, Klein, Katja, Chen, Kai-En, Williamson, Maia Kavanagh, Antón-Plágaro, Carlos, Shoemark, Deborah K, Simón-Gracia, Lorena, Bauer, Michael, Hollandi, Reka, Greber, Urs F, Horvath, Peter, Sessions, Richard B, Helenius, Ari, Hiscox, Julian A, Teesalu, Tambet, Matthews, David A, Davidson, Andrew D, Collins, Brett M, Cullen, Peter J, Yamauchi, Yohei

“…Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of coronavirus disease 2019 (COVID-19), uses the viral spike (S) protein for…”
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Author Correction: Test-time augmentation for deep learning-based cell segmentation on microscopy images by Moshkov, Nikita, Mathe, Botond, Kertesz-Farkas, Attila, Hollandi, Reka, Horvath, Peter

“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
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Applications of Deep Learning in Single-Cell Analysis by Hollandi, Réka

“…Biological experiments and medical examinations often include the investigation of biological samples at a cellular level – such as analysing cells or…”
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Erratum to “Maternal Smoking Highly Affects the Function, Membrane Integrity, and Rheological Properties in Fetal Red Blood Cells” by Dugmonits, Krisztina N., Chakraborty, Payal, Hollandi, Réka, Zahorán, Szabolcs, Pankotai-Bodó, Gabriella, Horváth, Péter, Orvos, Hajnalka, Hermesz, Edit

“…[This corrects the article DOI: 10.1155/2019/1509798.]…”
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Nucleus segmentation: towards automated solutions by Hollandi, Reka, Moshkov, Nikita, Paavolainen, Lassi, Tasnadi, Ervin, Piccinini, Filippo, Horvath, Peter

“…Single nucleus segmentation is a frequent challenge of microscopy image processing, since it is the first step of many quantitative data analysis pipelines…”
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nucleAIzer: A Parameter-free Deep Learning Framework for Nucleus Segmentation Using Image Style Transfer by Hollandi, Reka, Szkalisity, Abel, Toth, Timea, Tasnadi, Ervin, Molnar, Csaba, Mathe, Botond, Grexa, Istvan, Molnar, Jozsef, Balind, Arpad, Gorbe, Mate, Kovacs, Maria, Migh, Ede, Goodman, Allen, Balassa, Tamas, Koos, Krisztian, Wang, Wenyu, Caicedo, Juan Carlos, Bara, Norbert, Kovacs, Ferenc, Paavolainen, Lassi, Danka, Tivadar, Kriston, Andras, Carpenter, Anne Elizabeth, Smith, Kevin, Horvath, Peter

“…Single-cell segmentation is typically a crucial task of image-based cellular analysis. We present nucleAIzer, a deep-learning approach aiming toward a truly…”
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Harmonic Imaging of Stem Cells in Whole Blood at GHz Pixel Rate by Karpf, Sebastian, Glöckner Burmeister, Nina, Dubreil, Laurence, Ghosh, Shayantani, Hollandi, Reka, Pichon, Julien, Leroux, Isabelle, Henkel, Alessandra, Lutz, Valerie, Jurkevičius, Jonas, Latshaw, Alexandra, Kilin, Vasyl, Kutscher, Tonio, Wiggert, Moritz, Saavedra‐Villanueva, Oscar, Vogel, Alfred, Huber, Robert A., Horvath, Peter, Rouger, Karl, Bonacina, Luigi

“…The pre‐clinical validation of cell therapies requires monitoring the biodistribution of transplanted cells in tissues of host organisms. Real‐time detection…”
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Image-based and machine learning-guided multiplexed serology test for SARS-CoV-2 by Pietiäinen, Vilja, Polso, Minttu, Migh, Ede, Guckelsberger, Christian, Harmati, Maria, Diosdi, Akos, Turunen, Laura, Hassinen, Antti, Potdar, Swapnil, Koponen, Annika, Sebestyen, Edina Gyukity, Kovacs, Ferenc, Kriston, Andras, Hollandi, Reka, Burian, Katalin, Terhes, Gabriella, Visnyovszki, Adam, Fodor, Eszter, Lacza, Zsombor, Kantele, Anu, Kolehmainen, Pekka, Kakkola, Laura, Strandin, Tomas, Levanov, Lev, Kallioniemi, Olli, Kemeny, Lajos, Julkunen, Ilkka, Vapalahti, Olli, Buzas, Krisztina, Paavolainen, Lassi, Horvath, Peter, Hepojoki, Jussi

“…We present a miniaturized immunofluorescence assay (mini-IFA) for measuring antibody response in patient blood samples. The method utilizes machine…”
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