Search Results - "Holcomb, Cherie"

MHC class II super-enhancer increases surface expression of HLA-DR and HLA-DQ and affects cytokine production in autoimmune vitiligo by Cavalli, Giulio, Hayashi, Masahiro, Jin, Ying, Yorgov, Daniel, Santorico, Stephanie A., Holcomb, Cherie, Rastrou, Melinda, Erlich, Henry, Tengesdal, Isak W., Dagna, Lorenzo, Neff, C. Preston, Palmer, Brent E., Spritz, Richard A., Dinarello, Charles A.

“…Genetic risk for autoimmunity in HLA genes is most often attributed to structural specificity resulting in presentation of self-antigens. Autoimmune vitiligo…”
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Next-generation HLA sequencing using the 454 GS FLX system by Trachtenberg, Elizabeth A, Holcomb, Cherie L

“…Next-generation sequencing (NGS) of HLA class I and II loci (HLA-A, HLA-B, HLA-C, DRB1, DRB3, DRB4, DRB5, DQA1, DQB1, DPB1) is described here in detail using…”
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Prediction and diagnosis of bladder cancer recurrence based on urinary content of hTERT, SENP1, PPP1CA, and MCM5 transcripts by Brems-Eskildsen, Anne Sofie, Zieger, Karsten, Toldbod, Helle, Holcomb, Cherie, Higuchi, Russell, Mansilla, Francisco, Munksgaard, Pia P, Borre, Michael, Ørntoft, Torben F, Dyrskjøt, Lars

“…Identification of urinary biomarkers for detection of bladder cancer recurrence would be beneficial to minimize the frequency of cystoscopy. Our objective was…”
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Major association of vitiligo with HLA-A02:01 in Japanese by Jin, Ying, Hayashi, Masahiro, Fain, Pamela R., Suzuki, Tamio, Fukai, Kazuyoshi, Oiso, Naoki, Tanemura, Atsushi, Holcomb, Cherie L., Rastrou, Melinda, Erlich, Henry A., Spritz, Richard A.

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P113 by Yamamoto, Fumiko, Holcomb, Cherie L, Goodridge, Damian, Anderson, Mathew W, Erlich, Henry A, Tyan, Dolly B, Fernández-Viña, Marcelo A

“…Aim The Roche GS GType Assay is an amplicon based NGS approach for high-throughput, high-resolution HLA genotyping. We evaluated the ability of this assay…”
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OR37 by Rastrou, Melinda V, Li, Yan, Liu, Wei-min, Kurian, Sunil M, Gelbart, Terri, Mondala, Tony, Abecassis, Michael M, Friedewald, John, Salomon, Daniel R, Erlich, Henry A, Holcomb, Cherie L

“…Aim The circulation of kidney transplant recipients has been reported to contain DNA from the graft, associated with rejection. We previously reported the…”
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189-P Single pass very high resolution HLA genotyping by next generation sequencing with the 454 life sciences GS FLX and GS Junior by Hoglund, Bryan N, Holcomb, Cherie L, Moonsamy, Priscilla V, Goodridge, Damian, Erlich, Henry A

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1025-LB by Moonsamy, Priscilla V, Williams, Timothy, Bonella, Persia, Holcomb, Cherie L, Hillman, Grantland, Turenchalk, Gregory S, Blake, Lisbeth A, Simen, Birgitte B, Goodridge, Damian, Hamilton, Amy, May, Andrew P, Erlich, Henry A

“…Aim Next generation sequencing of HLA exonic amplicons with the 454 Life Sciences GS FLX System and Conexio Assign TM -ATF software provides high resolution,…”
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147-P: High Resolution HLA Genotyping by Next Generation 454 GS-FLX Sequencing Employing Automated Amplicon Handling by Holcomb, Cherie L, Gelber, Suzanne, Höglund, Bryan, Chu, Tom, Erlich, Henry A

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201-P Use of the Fluidigm® access Array™ system provides simplified amplicon library preparation in next generation sequencing for high throughput HLA genotyping by Moonsamy, Priscilla V, Bonella, Persia L, Williams, Timothy C, Holcomb, Cherie L, Turenchalk, Gregory S, Blake, Lisbeth A, Hoglund, Bryan N, Rastrou, Melinda, Daigle, Derek A, Simen, Birgitte B, Goodridge, Damian, Hillman, Grant, Hamilton, Amy, May, Andrew P, Erlich, Henry A

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15-OR: A Multi-Site Study Employing High Resolution HLA Genotyping by Next Generation 454 GS FLX Sequencing by Holcomb, Cherie L, Höglund, Bryan, Anderson, Matthew W, Blake, Lisbeth A, Böhme, Irena, Egholm, Michael, Ferriola, Deborah, Gabriel, Christian, Goodridge, Damian, Klein, Rolf, Ladner, Martha, Lind, Curt, Monos, Dimitri, Pando, Marcelo, Pröll, Johannes, Sayer, David C, Schmitz-Agheguian, Gudrun, Simen, Birgitte B, Thiele, Bernhard, Trachtenberg, Elizabeth, Tyan, Dolly B, Wassmuth, Ralf, White, Shana, Erlich, Henry A

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Association of Parkinson Disease with Structural and Regulatory Variants in the HLA Region by Wissemann, William T., Hill-Burns, Erin M., Zabetian, Cyrus P., Factor, Stewart A., Patsopoulos, Nikolaos, Hoglund, Bryan, Holcomb, Cherie, Donahue, Ryan J., Thomson, Glenys, Erlich, Henry, Payami, Haydeh

“…Historically, association of disease with the major histocompatibility complex (HLA) genes has been tested with HLA alleles that encode antigen-binding…”
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Next-Generation DNA Re-Sequencing Identifies Common Variants of TYR and HLA-A that Modulate the Risk of Generalized Vitiligo via Antigen Presentation by Jin, Ying, Ferrara, Tracey, Gowan, Katherine, Holcomb, Cherie, Rastrou, Melinda, Erlich, Henry A., Fain, Pamela R., Spritz, Richard A.

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Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing by Mack, Steven J, Milius, Robert P, Gifford, Benjamin D, Sauter, Jürgen, Hofmann, Jan, Osoegawa, Kazutoyo, Robinson, James, Groeneweg, Mathijs, Turenchalk, Gregory S, Adai, Alex, Holcomb, Cherie, Rozemuller, Erik H, Penning, Maarten T, Heuer, Michael L, Wang, Chunlin, Salit, Marc L, Schmidt, Alexander H, Parham, Peter R, Müller, Carlheinz, Hague, Tim, Fischer, Gottfried, Fernandez-Viňa, Marcelo, Hollenbach, Jill A, Norman, Paul J, Maiers, Martin

“…Abstract The development of next-generation sequencing (NGS) technologies for HLA and KIR genotyping is rapidly advancing knowledge of genetic variation of…”
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21-OR by Holcomb, Cherie L., Rastrou, Melinda, Hoglund, Bryan, Goodridge, Damian, Salomon, Daniel R., Erlich, Henry A.

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21-OR: QUANTITATIVE ANALYSIS OF MIXTURES BY DEEP SEQUENCING OF HLA GENE AMPLICONS USING NEXT GENERATION SYSTEMS by Holcomb, Cherie L., Rastrou, Melinda, Hoglund, Bryan, Goodridge, Damian, Salomon, Daniel R., Erlich, Henry A.

“…The clonal property of next generation sequencing systems allows for the quantitative analysis of mixed samples by simply counting sequences corresponding to…”
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P113 : HLA HIGH RESOLUTION GENOTYPING USING 454 NGS AND GS GTYPE HLA ASSAY by Yamamoto, Fumiko, Holcomb, Cherie L., Goodridge, Damian, Anderson, Mathew W., Erlich, Henry A., Tyan, Dolly B., Fernández-Viña, Marcelo A.

“…The Roche GS GType Assay is an amplicon based NGS approach for high-throughput, high-resolution HLA genotyping. We evaluated the ability of this assay together…”
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21-OR by Holcomb, Cherie L, Rastrou, Melinda, Hoglund, Bryan, Goodridge, Damian, Salomon, Daniel R, Erlich, Henry A

“…Aim The clonal property of next generation sequencing systems allows for the quantitative analysis of mixed samples by simply counting sequences corresponding…”
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11-OR by Holcomb, Cherie L., Hoglund, Bryan, Williams, Timothy, Goodridge, Damian, Erlich, Henry A.

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11-OR by Holcomb, Cherie L, Hoglund, Bryan, Williams, Timothy, Goodridge, Damian, Erlich, Henry A

“…Aim We have previously reported the development of very high resolution (VHR) HLA genotyping, designed to resolve the majority of both the “common and well…”
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