Search Results - "Hirakawa, Hideki"

NODULE INCEPTION creates a long-distance negative feedback loop involved in homeostatic regulation of nodule organ production by Soyano, Takashi, Hirakawa, Hideki, Sato, Shusei, Hayashi, Makoto, Kawaguchi, Masayoshi

“…Significance Long-range organ-to-organ communications are important for the coordination of development and environmental adaptation in multicellular…”
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Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis by Rai, Amit, Hirakawa, Hideki, Nakabayashi, Ryo, Kikuchi, Shinji, Hayashi, Koki, Rai, Megha, Tsugawa, Hiroshi, Nakaya, Taiki, Mori, Tetsuya, Nagasaki, Hideki, Fukushi, Runa, Kusuya, Yoko, Takahashi, Hiroki, Uchiyama, Hiroshi, Toyoda, Atsushi, Hikosaka, Shoko, Goto, Eiji, Saito, Kazuki, Yamazaki, Mami

“…Plant genomes remain highly fragmented and are often characterized by hundreds to thousands of assembly gaps. Here, we report chromosome-level reference and…”
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Genome‐wide survey of artificial mutations induced by ethyl methanesulfonate and gamma rays in tomato by Shirasawa, Kenta, Hirakawa, Hideki, Nunome, Tsukasa, Tabata, Satoshi, Isobe, Sachiko

“…Genome‐wide mutations induced by ethyl methanesulfonate (EMS) and gamma irradiation in the tomato Micro‐Tom genome were identified by a whole‐genome shotgun…”
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Molecular evidence for recent divergence of X- and Y-linked gene pairs in Spinacia oleracea L by Okazaki, Yosuke, Takahata, Satoshi, Hirakawa, Hideki, Suzuki, Yutaka, Onodera, Yasuyuki

“…Dioecy has evolved recently and independently from cosexual populations in many angiosperm lineages, providing opportunities to understand the evolutionary…”
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Genome structure of Rosa multiflora, a wild ancestor of cultivated roses by Nakamura, Noriko, Hirakawa, Hideki, Sato, Shusei, Otagaki, Shungo, Matsumoto, Shogo, Tabata, Satoshi, Tanaka, Yoshikazu

“…Abstract The draft genome sequence of a wild rose (Rosa multiflora Thunb.) was determined using Illumina MiSeq and HiSeq platforms. The total length of the…”
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Draft sequences of the radish (Raphanus sativus L.) genome by Kitashiba, Hiroyasu, Li, Feng, Hirakawa, Hideki, Kawanabe, Takahiro, Zou, Zhongwei, Hasegawa, Yoichi, Tonosaki, Kaoru, Shirasawa, Sachiko, Fukushima, Aki, Yokoi, Shuji, Takahata, Yoshihito, Kakizaki, Tomohiro, Ishida, Masahiko, Okamoto, Shunsuke, Sakamoto, Koji, Shirasawa, Kenta, Tabata, Satoshi, Nishio, Takeshi

“…Radish (Raphanus sativus L., n = 9) is one of the major vegetables in Asia. Since the genomes of Brassica and related species including radish underwent genome…”
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Genome sequence and analysis of a Japanese radish (Raphanus sativus) cultivar named 'Sakurajima Daikon' possessing giant root by Shirasawa, Kenta, Hirakawa, Hideki, Fukino, Nobuko, Kitashiba, Hiroyasu, Isobe, Sachiko

“…The complex genome of a Japanese radish (Raphanus sativus) cultivar named 'Okute-Sakurajima' with an extremely large edible round root was analysed to explore…”
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Widely targeted metabolome and transcriptome landscapes of Allium fistulosum–A. cepa chromosome addition lines revealed a flavonoid hot spot on chromosome 5A by Abdelrahman, Mostafa, Hirata, Sho, Sawada, Yuji, Hirai, Masami Yokota, Sato, Shusei, Hirakawa, Hideki, Mine, Yoko, Tanaka, Keisuke, Shigyo, Masayoshi

“…Here, we report a comprehensive analysis of the widely targeted metabolome and transcriptome profiles of Allium fistulosum L. (FF) with the single extra…”
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Phased genome sequence of an interspecific hybrid flowering cherry, 'Somei-Yoshino' (Cerasus × yedoensis) by Shirasawa, Kenta, Esumi, Tomoya, Hirakawa, Hideki, Tanaka, Hideyuki, Itai, Akihiro, Ghelfi, Andrea, Nagasaki, Hideki, Isobe, Sachiko

“…We report the phased genome sequence of an interspecific hybrid, the flowering cherry 'Somei-Yoshino' (Cerasus × yedoensis). The sequence data were obtained by…”
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Draft genome sequence of eggplant (Solanum melongena L.): the representative solanum species indigenous to the old world by Hirakawa, Hideki, Shirasawa, Kenta, Miyatake, Koji, Nunome, Tsukasa, Negoro, Satomi, Ohyama, Akio, Yamaguchi, Hirotaka, Sato, Shusei, Isobe, Sachiko, Tabata, Satoshi, Fukuoka, Hiroyuki

“…Unlike other important Solanaceae crops such as tomato, potato, chili pepper, and tobacco, all of which originated in South America and are cultivated…”
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Genomic variation across distribution of Micro-Tom, a model cultivar of tomato (Solanum lycopersicum) by Nagasaki, Hideki, Shirasawa, Kenta, Hoshikawa, Ken, Isobe, Sachiko, Ezura, Hiroshi, Aoki, Koh, Hirakawa, Hideki

“…Micro-Tom is a cultivar of tomato (Solanum lycopersicum), which is known as a major crop and model plant in Solanaceae. Micro-Tom has phenotypic traits such as…”
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The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants by Akagi, Takashi, Shirasawa, Kenta, Nagasaki, Hideki, Hirakawa, Hideki, Tao, Ryutaro, Comai, Luca, Henry, Isabelle M

“…Most angiosperms bear hermaphroditic flowers, but a few species have evolved outcrossing strategies, such as dioecy, the presence of separate male and female…”
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A genetic mechanism for female-limited Batesian mimicry in Papilio butterfly by Nishikawa, Hideki, Iijima, Takuro, Kajitani, Rei, Yamaguchi, Junichi, Ando, Toshiya, Suzuki, Yutaka, Sugano, Sumio, Fujiyama, Asao, Kosugi, Shunichi, Hirakawa, Hideki, Tabata, Satoshi, Ozaki, Katsuhisa, Morimoto, Hiroya, Ihara, Kunio, Obara, Madoka, Hori, Hiroshi, Itoh, Takehiko, Fujiwara, Haruhiko

“…Haruhiko Fujiwara and colleagues report the genome sequences of two swallowtail butterfly species, Papilio xuthus and Papilio polytes , and the identification…”
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Retracted: Hayai-Annotation Plants: an ultra-fast and comprehensive functional gene annotation system in plants by Ghelfi, Andrea, Shirasawa, Kenta, Hirakawa, Hideki, Isobe, Sachiko

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Comprehensive collection of genes and comparative analysis of full-length transcriptome sequences from Japanese larch (Larix kaempferi) and Kuril larch (Larix gmelinii var. japonica) by Mishima, Kentaro, Hirakawa, Hideki, Iki, Taiichi, Fukuda, Yoko, Hirao, Tomonori, Tamura, Akira, Takahashi, Makoto

“…Abstract Background Japanese larch ( Larix kaempferi ) is an economically important deciduous conifer species that grows in cool-temperate forests and is…”
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Comparative analysis using the draft genome sequence of California poppy (Eschscholzia californica) for exploring the candidate genes involved in benzylisoquinoline alkaloid biosynthesis by Yamada, Yasuyuki, Hirakawa, Hideki, Hori, Kentaro, Minakuchi, Yohei, Toyoda, Atsushi, Shitan, Nobukazu, Sato, Fumihiko

“…ABSTRACT Genome characterization of California poppy (Eschscholzia californica cv. “Hitoezaki”), which produces pharmaceutically important benzylisoquinoline…”
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The rhizobial autotransporter determines the symbiotic nitrogen fixation activity of Lotus japonicus in a host-specific manner by Shimoda, Yoshikazu, Nishigaya, Yuki, Yamaya-Ito, Hiroko, Inagaki, Noritoshi, Umehara, Yosuke, Hirakawa, Hideki, Sato, Shusei, Yamazaki, Toshimasa, Hayashi, Makoto

“…Leguminous plants establish endosymbiotic associations with rhizobia and form root nodules in which the rhizobia fix atmospheric nitrogen. The host plant and…”
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Chromosome-level de novo genome assemblies of over 100 plant species by Shirasawa, Kenta, Harada, Daijiro, Hirakawa, Hideki, Isobe, Sachiko, Kole, Chittaranjan

“…Genome sequence analysis in higher plants began with the whole-genome sequencing of Arabidopsis thaliana. Owing to the great advances in sequencing…”
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De novo whole-genome assembly in Chrysanthemum seticuspe, a model species of Chrysanthemums, and its application to genetic and gene discovery analysis by Hirakawa, Hideki, Sumitomo, Katsuhiko, Hisamatsu, Tamotsu, Nagano, Soichiro, Shirasawa, Kenta, Higuchi, Yohei, Kusaba, Makoto, Koshioka, Masaji, Nakano, Yoshihiro, Yagi, Masafumi, Yamaguchi, Hiroyasu, Taniguchi, Kenji, Nakano, Michiharu, Isobe, Sachiko N

“…Cultivated chrysanthemum (Chrysanthemum morifolium Ramat.) is one of the most economically important ornamental crops grown worldwide. It has a complex…”
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Transcriptome analysis of Clavibacter michiganensis subsp. michiganensis-infected tomatoes: a role of salicylic acid in the host response by Yokotani, Naoki, Hasegawa, Yoshinori, Sato, Masaru, Hirakawa, Hideki, Kouzai, Yusuke, Nishizawa, Yoko, Yamamoto, Eiji, Naito, Yoshiki, Isobe, Sachiko

“…Abstract Bacterial canker of tomato ( Solanum lycopersicon ) caused by the Gram-positive bacterium Clavibacter michiganensis subsp. michiganensis ( Cmm ) is an…”
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