Search Results - "Higgins, Janet"

Comparative Genomics of Flowering Time Pathways Using Brachypodium distachyon as a Model for the Temperate Grasses by Higgins, Janet A, Bailey, Paul C, Laurie, David A

“…Brachypodium distachyon (Brachypodium) is a model for the temperate grasses which include important cereals such as barley, wheat and oats. Comparison of the…”
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Associative transcriptomics of traits in the polyploid crop species Brassica napus by Harper, Andrea L, Trick, Martin, Higgins, Janet, Fraser, Fiona, Clissold, Leah, Wells, Rachel, Hattori, Chie, Werner, Peter, Bancroft, Ian

“…Sequencing a genome and identifying genetic markers lays the groundwork for genome-wide association studies, but can be difficult to achieve for polyploid…”
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Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus by Higgins, Janet, Magusin, Andreas, Trick, Martin, Fraser, Fiona, Bancroft, Ian

“…Polyploidy often results in considerable changes in gene expression, both immediately and over evolutionary time. New phenotypes often arise with polyploid…”
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Dissecting the genome of the polyploid crop oilseed rape by transcriptome sequencing by Bancroft, Ian, Morgan, Colin, Fraser, Fiona, Higgins, Janet, Wells, Rachel, Clissold, Leah, Baker, David, Long, Yan, Meng, Jinling, Wang, Xiaowu, Liu, Shengyi, Trick, Martin

“…Polyploidy complicates genomics-based breeding of many crops, including wheat, potato, cotton, oat and sugarcane. To address this challenge, we sequenced leaf…”
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microRNAs associated with early neural crest development in Xenopus laevis by Ward, Nicole J, Green, Darrell, Higgins, Janet, Dalmay, Tamas, Münsterberg, Andrea, Moxon, Simon, Wheeler, Grant N

“…The neural crest (NC) is a class of transitory stem cell-like cells unique to vertebrate embryos. NC cells arise within the dorsal neural tube where they…”
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Author Correction: Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus by Edwards, Anne, Njaci, Isaac, Sarkar, Abhimanyu, Jiang, Zhouqian, Kaithakottil, Gemy George, Moore, Christopher, Cheema, Jitender, Stevenson, Clare E. M., Rejzek, Martin, Novák, Petr, Vigouroux, Marielle, Vickers, Martin, Wouters, Roland H. M., Paajanen, Pirita, Steuernagel, Burkhard, Moore, Jonathan D., Higgins, Janet, Swarbreck, David, Martens, Stefan, Kim, Colin Y., Weng, Jing-Ke, Mundree, Sagadevan, Kilian, Benjamin, Kumar, Shiv, Loose, Matt, Yant, Levi, Macas, Jiří, Wang, Trevor L., Martin, Cathie, Emmrich, Peter M. F.

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Genome-Wide Transcription During Early Wheat Meiosis Is Independent of Synapsis, Ploidy Level, and the Ph1 Locus by Martín, Azahara Carmen, Borrill, Philippa, Higgins, Janet, Alabdullah, Abdulkader, Ramírez-González, Ricardo H, Swarbreck, David, Uauy, Cristobal, Shaw, Peter, Moore, Graham

“…Polyploidization is a fundamental process in plant evolution. One of the biggest challenges faced by a new polyploid is meiosis, particularly discriminating…”
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Exploring gene networks in two sunflower lines with contrasting leaf senescence phenotype using a system biology approach by Moschen, Sebastián, Marino, Johanna, Nicosia, Salvador, Higgins, Janet, Alseekh, Saleh, Astigueta, Francisco, Bengoa Luoni, Sofia, Rivarola, Máximo, Fernie, Alisdair R, Blanchet, Nicolas, Langlade, Nicolas B, Paniego, Norma, Fernández, Paula, Heinz, Ruth A

“…Leaf senescence is a complex process, controlled by multiple genetic and environmental variables. In sunflower, leaf senescence is triggered abruptly following…”
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Genomic regions and candidate genes selected during the breeding of rice in Vietnam by Higgins, Janet, Santos, Bruno, Khanh, Tran Dang, Trung, Khuat Huu, Duong, Tran Duy, Doai, Nguyen Thi Phuong, Hall, Anthony, Dyer, Sarah, Ham, Le Huy, Caccamo, Mario, Vega, Jose

“…Vietnam harnesses a rich diversity of rice landraces adapted to a range of conditions, which constitute a largely untapped source of diversity for the…”
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Resequencing of 672 Native Rice Accessions to Explore Genetic Diversity and Trait Associations in Vietnam by Higgins, Janet, Santos, Bruno, Khanh, Tran Dang, Trung, Khuat Huu, Duong, Tran Duy, Doai, Nguyen Thi Phuong, Khoa, Nguyen Truong, Ha, Dang Thi Thanh, Diep, Nguyen Thuy, Dung, Kieu Thi, Phi, Cong Nguyen, Thuy, Tran Thi, Tuan, Nguyen Thanh, Tran, Hoang Dung, Trung, Nguyen Thanh, Giang, Hoang Thi, Nhung, Ta Kim, Tran, Cuong Duy, Lang, Son Vi, Nghia, La Tuan, Van Giang, Nguyen, Xuan, Tran Dang, Hall, Anthony, Dyer, Sarah, Ham, Le Huy, Caccamo, Mario, De Vega, Jose J.

“…Background Vietnam possesses a vast diversity of rice landraces due to its geographical situation, latitudinal range, and a variety of ecosystems. This genetic…”
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Plagiarism in submitted manuscripts: incidence, characteristics and optimization of screening-case study in a major specialty medical journal by Higgins, Janet R, Lin, Feng-Chang, Evans, James P

“…Plagiarism is common and threatens the integrity of the scientific literature. However, its detection is time consuming and difficult, presenting challenges to…”
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Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species by Hammond, John P, Broadley, Martin R, Craigon, David J, Higgins, Janet, Emmerson, Zoe F, Townsend, Henrik J, White, Philip J, May, Sean T

“…High-density oligonucleotide (oligo) arrays are a powerful tool for transcript profiling. Arrays based on GeneChip technology are amongst the most widely used,…”
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Exploiting the ZIP4 homologue within the wheat Ph1 locus has identified two lines exhibiting homoeologous crossover in wheat-wild relative hybrids by Rey, María-Dolores, Martín, Azahara C., Higgins, Janet, Swarbreck, David, Uauy, Cristobal, Shaw, Peter, Moore, Graham

“…Despite possessing related ancestral genomes, hexaploid wheat behaves as a diploid during meiosis. The wheat Ph1 locus promotes accurate synapsis and crossover…”
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Characterizing subgenome recombination and chromosomal imbalances in banana varietal lineages by Higgins, Janet, Osorio-Guarín, Jaime Andrés, Olave-Achury, Carolina, Toloza-Moreno, Deisy Lisseth, Enriquez, Ayda, Di Palma, Federica, Yockteng, Roxana, De Vega, Jose J

“…Bananas and plantains (Musa spp.) are among the most important crops worldwide. The cultivated varieties are vegetatively propagated, so their genetic…”
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Heterarchy of transcription factors driving basal and luminal cell phenotypes in human urothelium by Fishwick, Carl, Higgins, Janet, Percival-Alwyn, Lawrence, Hustler, Arianna, Pearson, Joanna, Bastkowski, Sarah, Moxon, Simon, Swarbreck, David, Greenman, Chris D, Southgate, Jennifer

“…Cell differentiation is affected by complex networks of transcription factors that co-ordinate re-organisation of the chromatin landscape. The hierarchies of…”
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FLOWERING LOCUS T-like gene family in barley (Hordeum vulgare) by Faure, S, Higgins, J, Turner, A, Laurie, D.A

“…The FLOWERING LOCUS T (FT) gene plays a central role in integrating flowering signals in Arabidopsis because its expression is regulated antagonistically by…”
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Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.) by Moschen, Sebastián, Di Rienzo, Julio A., Higgins, Janet, Tohge, Takayuki, Watanabe, Mutsumi, González, Sergio, Rivarola, Máximo, García-García, Francisco, Dopazo, Joaquin, Hopp, H. Esteban, Hoefgen, Rainer, Fernie, Alisdair R., Paniego, Norma, Fernández, Paula, Heinz, Ruth A.

“…Key message By integration of transcriptional and metabolic profiles we identified pathways and hubs transcription factors regulated during drought conditions…”
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Network and biosignature analysis for the integration of transcriptomic and metabolomic data to characterize leaf senescence process in sunflower by Moschen, Sebastián, Higgins, Janet, Di Rienzo, Julio A, Heinz, Ruth A, Paniego, Norma, Fernandez, Paula

“…In recent years, high throughput technologies have led to an increase of datasets from omics disciplines allowing the understanding of the complex regulatory…”
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Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus by Edwards, Anne, Njaci, Isaac, Sarkar, Abhimanyu, Jiang, Zhouqian, Kaithakottil, Gemy George, Moore, Christopher, Cheema, Jitender, Stevenson, Clare E. M., Rejzek, Martin, Novák, Petr, Vigouroux, Marielle, Vickers, Martin, Wouters, Roland H. M., Paajanen, Pirita, Steuernagel, Burkhard, Moore, Jonathan D., Higgins, Janet, Swarbreck, David, Martens, Stefan, Kim, Colin Y., Weng, Jing-Ke, Mundree, Sagadevan, Kilian, Benjamin, Kumar, Shiv, Loose, Matt, Yant, Levi, Macas, Jiří, Wang, Trevor L., Martin, Cathie, Emmrich, Peter M. F.

“…Grass pea ( Lathyrus sativus L.) is a rich source of protein cultivated as an insurance crop in Ethiopia, Eritrea, India, Bangladesh, and Nepal. Its resilience…”
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Genome-wide association analyses using multilocus models on bananas (Musa spp.) reveal candidate genes related to morphology, fruit quality, and yield by Osorio-Guarin, Jaime Andrés, Higgins, Janet, Toloza-Moreno, Deisy Lisseth, Di Palma, Federica, Enriquez Valencia, Ayda Lilia, Riveros Munévar, Fernando, De Vega, José J, Yockteng, Roxana

“…Abstract Bananas (Musa spp.) are an essential fruit worldwide and rank as the fourth most significant food crop for addressing malnutrition due to their rich…”
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