Search Results - "Hickenbotham, Matthew"

Extending assembly of short DNA sequences to handle error by Jeck, William R., Reinhardt, Josephine A., Baltrus, David A., Hickenbotham, Matthew T., Magrini, Vincent, Mardis, Elaine R., Dangl, Jeffery L., Jones, Corbin D.

“…Inexpensive de novo genome sequencing, particularly in organisms with small genomes, is now possible using several new sequencing technologies. Some of these…”
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The value of avian genomics to the conservation of wildlife by Romanov, Michael N, Tuttle, Elaina M, Houck, Marlys L, Modi, William S, Chemnick, Leona G, Korody, Marisa L, Mork, Emily M Stremel, Otten, Christie A, Renner, Tanya, Jones, Kenneth C, Dandekar, Sugandha, Papp, Jeanette C, Da, Yang, Green, Eric D, Magrini, Vincent, Hickenbotham, Matthew T, Glasscock, Jarret, McGrath, Sean, Mardis, Elaine R, Ryder, Oliver A

“…Genomic studies in non-domestic avian models, such as the California condor and white-throated sparrow, can lead to more comprehensive conservation plans and…”
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Viral discovery and sequence recovery using DNA microarrays by Wang, David, Urisman, Anatoly, Liu, Yu-Tsueng, Springer, Michael, Ksiazek, Thomas G, Erdman, Dean D, Mardis, Elaine R, Hickenbotham, Matthew, Magrini, Vincent, Eldred, James, Latreille, J Phillipe, Wilson, Richard K, Ganem, Don, DeRisi, Joseph L

“…Because of the constant threat posed by emerging infectious diseases and the limitations of existing approaches used to identify new pathogens, there is a…”
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Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach by Bainbridge, Matthew N, Warren, René L, Hirst, Martin, Romanuik, Tammy, Zeng, Thomas, Go, Anne, Delaney, Allen, Griffith, Malachi, Hickenbotham, Matthew, Magrini, Vincent, Mardis, Elaine R, Sadar, Marianne D, Siddiqui, Asim S, Marra, Marco A, Jones, Steven J M

“…High throughput sequencing-by-synthesis is an emerging technology that allows the rapid production of millions of bases of data. Although the sequence reads…”
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The DNA sequence of human chromosome 7 by Wilson, Richard K, Hillier, LaDeana W, Fulton, Robert S, Fulton, Lucinda A, Graves, Tina A, Pepin, Kymberlie H, Wagner-McPherson, Caryn, Layman, Dan, Maas, Jason, Jaeger, Sara, Walker, Rebecca, Wylie, Kristine, Sekhon, Mandeep, Becker, Michael C, O'Laughlin, Michelle D, Schaller, Mark E, Fewell, Ginger A, Delehaunty, Kimberly D, Miner, Tracie L, Nash, William E, Cordes, Matt, Du, Hui, Sun, Hui, Edwards, Jennifer, Bradshaw-Cordum, Holland, Ali, Johar, Andrews, Stephanie, Isak, Amber, VanBrunt, Andrew, Nguyen, Christine, Du, Feiyu, Lamar, Betty, Courtney, Laura, Kalicki, Joelle, Ozersky, Philip, Bielicki, Lauren, Holmes, Andrea, Harkins, Richard, Harris, Anthony, Strong, Cynthia Madsen, Hou, Shunfang, Tomlinson, Chad, Dauphin-Kohlberg, Sara, Leonard, Shawn, Rohlfing, Theresa, Rock, Susan M, Tin-Wollam, Aye-Mon, Minx, Patrick, Maupin, Rachel, Strowmatt, Catrina, Latreille, Phil, Miller, Nancy, Johnson, Doug, Murray, Jennifer, Woessner, Jeffrey P, Wendl, Michael C, Yang, Shiaw-Pyng, Schultz, Brian R, Wallis, John W, Spieth, John, Bieri, Tamberlyn A, Nelson, Joanne O, Berkowicz, Nicolas, Wohldmann, Patricia E, Cook, Lisa L, Hickenbotham, Matthew T, Eldred, James, Williams, Donald, Bedell, Joseph A, Clifton, Sandra W, Chissoe, Stephanie L, Marra, Marco A, Raymond, Christopher, Haugen, Eric, Gillett, Will, James, Rose, Iadanoto, Shawn, Simms, Elizabeth, Levy, Ruth, Clendenning, James, Kaul, Rajinder, Kent, W. James, Furey, Terrence S, Baertsch, Robert A, Brent, Michael R, Keibler, Evan, Flicek, Paul, Bork, Peer, Suyama, Mikita, Bailey, Jeffrey A, Portnoy, Matthew E, Torrents, David, Chinwalla, Asif T, Gish, Warren R, Eddy, Sean R, McPherson, John D, Olson, Maynard V, Eichler, Evan E, Green, Eric D, Waterston, Robert H

“…Human chromosome 7 has historically received prominent attention in the human genetics community, primarily related to the search for the cystic fibrosis gene…”
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Generation and annotation of the DNA sequences of human chromosomes 2 and 4 by Wilson, Richard K, Hillier, LaDeana W, Fulton, Robert S, Fulton, Lucinda A, Pepin, Kymberlie H, Minx, Patrick, Layman, Dan, Wylie, Kristine, Sekhon, Mandeep, Becker, Michael C, Delehaunty, Kimberly D, Miner, Tracie L, Nash, William E, Kremitzki, Colin, Oddy, Lachlan, Du, Hui, Sun, Hui, Ali, Johar, Carter, Jason, Cordes, Matt, Harris, Anthony, Isak, Amber, van Brunt, Andrew, Nguyen, Christine, Du, Feiyu, Courtney, Laura, Ozersky, Philip, Abbott, Scott, Belter, Edward A, Caruso, Lauren, Cedroni, Maria, Cotton, Marc, Davidson, Teresa, Erb, Thomas, Fronick, Catrina, Gaige, Tony, Haakenson, William, Haglund, Krista, Holmes, Andrea, Harkins, Richard, Kim, Kyung, Kruchowski, Scott S, Grewal, Neenu, Goyea, Ernest, Hou, Shunfang, Martinka, Scott, Mead, Kelly, McLellan, Michael D, Meyer, Rick, Randall-Maher, Jennifer, Tomlinson, Chad, Dauphin-Kohlberg, Sara, Kozlowicz-Reilly, Amy, Swearengen-Shahid, Sharhonda, Strong, Joseph T, Thompson, Johanna, Yoakum, Martin, Leonard, Shawn, Trani, Lee, Radionenko, Maxim, Waligorski, Jason E, Wang, Chunyan, Rock, Susan M, Tin-Wollam, Aye-Mon, Maupin, Rachel, Latreille, Phil, Wendl, Michael C, Wallis, John W, Spieth, John, Bieri, Tamberlyn A, Berkowicz, Nicolas, Osborne, John, Ding, Li, Meyer, Rekha, Sabo, Aniko, Shotland, Yoram, Sinha, Prashant, Wohldmann, Patricia E, Cook, Lisa L, Eldred, James, Williams, Donald, Jones, Thomas A, She, Xinwei, Ciccarelli, Francesca D, Izaurralde, Elisa, Taylor, James, Schmutz, Jeremy, Cox, David R, Huang, Xiaoqiu, McPherson, John D, Warren, Wesley C, Chinwalla, Asif T, Eddy, Sean R, Marra, Marco A, Ovcharenko, Ivan, Furey, Terrence S, Eichler, Evan E, Bork, Peer, Suyama, Mikita, Torrents, David

“…Human chromosome 2 is unique to the human lineage in being the product of a head-to-head fusion of two intermediate-sized ancestral chromosomes. Chromosome 4…”
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DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome by Locke, Devin, Conyers, Joshua, Hickenbotham, Matthew, Dooling, David, McGrath, Sean, Abbott, Rachel, Shannon, William D, Gordon, David, Zhao, Yu, Baty, Jack, Mardis, Elaine R, Glasscock, Jarret, Ding, Li, Link, Daniel C, Shi, Xiaoqi, Heath, Sharon, Tomasson, Michael H, Walter, Matthew J, Hillier, LaDeana W, Chinwalla, Asif, Wylie, Todd, Sander, Nathan, Ley, Timothy J, Abbott, Scott, Westervelt, Peter, Pohl, Craig, Hawkins, Amy, Graubert, Timothy A, Smith, Scott, Larson, David E, Wilson, Richard K, Cook, Lisa, Ries, Rhonda E, Payton, Jacqueline E, McLellan, Michael D, Chen, Ken, DiPersio, John F, Dunford-Shore, Brian H, Magrini, Vincent, Nagarajan, Rakesh, Koboldt, Dan C, Fulton, Lucinda, Watson, Mark, Ivanovich, Jennifer, Fulton, Bob, Miner, Tracie, Minx, Patrick, Osborne, John R

“…Acute myeloid leukaemia is a highly malignant haematopoietic tumour that affects about 13,000 adults in the United States each year. The treatment of this…”
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Whole-genome sequencing and variant discovery in C. elegans by Mardis, Elaine R, Hillier, LaDeana W, Marth, Gabor T, Quinlan, Aaron R, Dooling, David, Fewell, Ginger, Barnett, Derek, Fox, Paul, Glasscock, Jarret I, Hickenbotham, Matthew, Huang, Weichun, Magrini, Vincent J, Richt, Ryan J, Sander, Sacha N, Stewart, Donald A, Stromberg, Michael, Tsung, Eric F, Wylie, Todd, Schedl, Tim, Wilson, Richard K

“…Massively parallel sequencing instruments enable rapid and inexpensive DNA sequence data production. Because these instruments are new, their data require…”
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Next-generation transcriptome sequencing of the premenopausal breast epithelium using specimens from a normal human breast tissue bank by Pardo, Ivanesa, Lillemoe, Heather A, Blosser, Rachel J, Choi, MiRan, Sauder, Candice A M, Doxey, Diane K, Mathieson, Theresa, Hancock, Bradley A, Baptiste, Dadrie, Atale, Rutuja, Hickenbotham, Matthew, Zhu, Jin, Glasscock, Jarret, Storniolo, Anna Maria V, Zheng, Faye, Doerge, R W, Liu, Yunlong, Badve, Sunil, Radovich, Milan, Clare, Susan E

“…Our efforts to prevent and treat breast cancer are significantly impeded by a lack of knowledge of the biology and developmental genetics of the normal mammary…”
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Characterizing the heterogeneity of triple-negative breast cancers using microdissected normal ductal epithelium and RNA-sequencing by Radovich, Milan, Clare, Susan E., Atale, Rutuja, Pardo, Ivanesa, Hancock, Bradley A., Solzak, Jeffrey P., Kassem, Nawal, Mathieson, Theresa, Storniolo, Anna Maria V., Rufenbarger, Connie, Lillemoe, Heather A., Blosser, Rachel J., Choi, Mi Ran, Sauder, Candice A., Doxey, Diane, Henry, Jill E., Hilligoss, Eric E., Sakarya, Onur, Hyland, Fiona C., Hickenbotham, Matthew, Zhu, Jin, Glasscock, Jarret, Badve, Sunil, Ivan, Mircea, Liu, Yunlong, Sledge, George W., Schneider, Bryan P.

“…Triple-negative breast cancers (TNBCs) are a heterogeneous set of tumors defined by an absence of actionable therapeutic targets (ER, PR, and HER-2)…”
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Abstract 2216: Next-generation whole transcriptome sequencing of triple-negative breast tumors and normal tissues by Radovich, Milan, Clare, Susan E., Pardo, Ivanesa, Hancock, Bradley A., Kassem, Nawal, Sledge, George W., Rufenbarger, Connie, Storniolo, Anna Maria V., Mathieson, Theresa, Sun, Jie, Henry, Jill E., Lillemoe, Heather A., Hilligoss, Eric E., Elliott, James S., Richt, Ryan, Hickenbotham, Matthew, Glasscock, Jarret, Liu, Yunlong, Schneider, Bryan P.

“…Abstract Background: Triple-negative breast cancer (TNBC) disproportionally affects pre-menopausal women and women of African-American descent, and has been…”
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Gallus GBrowse: a unified genomic database for the chicken by Schmidt, Carl J., Romanov, Michael, Ryder, Oliver, Magrini, Vincent, Hickenbotham, Matthew, Glasscock, Jarret, McGrath, Sean, Mardis, Elaine, Stein, Lincoln D.

“…Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The…”
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DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome : Personal genomes by LEY, Timothy J, MARDIS, Elaine R, COOK, Lisa, ABBOTT, Rachel, LARSON, David E, KOBOLDT, Dan C, POHL, Craig, SMITH, Scott, HAWKINS, Amy, ABBOTT, Scott, LOCKE, Devin, HILLIER, Ladeana W, LI DING, MINER, Tracie, FULTON, Lucinda, MAGRINI, Vincent, WYLIE, Todd, GLASSCOCK, Jarret, CONYERS, Joshua, SANDER, Nathan, XIAOQI SHI, OSBORNE, John R, MINX, Patrick, FULTON, Bob, GORDON, David, CHINWALLA, Asif, YU ZHAO, RIES, Rhonda E, PAYTON, Jacqueline E, WESTERVELT, Peter, TOMASSON, Michael H, WATSON, Mark, BATY, Jack, IVANOVICH, Jennifer, MCLELLAN, Michael D, HEATH, Sharon, SHANNON, William D, NAGARAJAN, Rakesh, WALTER, Matthew J, LINK, Daniel C, GRAUBERT, Timothy A, DIPERSIO, John F, WILSON, Richard K, KEN CHEN, DOOLING, David, DUNFORD-SHORE, Brian H, MCGRATH, Sean, HICKENBOTHAM, Matthew

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