Search Results - "Hibberd, Julian"

TransRate: reference-free quality assessment of de novo transcriptome assemblies by Smith-Unna, Richard, Boursnell, Chris, Patro, Rob, Hibberd, Julian M, Kelly, Steven

“…TransRate is a tool for reference-free quality assessment of de novo transcriptome assemblies. Using only the sequenced reads and the assembly as input, we…”
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Photosynthesis: Compatibility between incompatible pathways explained by Hibberd, Julian M.

“…A recent study has overturned a long-held view that two distinct modifications to photosynthesis are incompatible. The findings provide interesting new…”
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Redesigning photosynthesis to sustainably meet global food and bioenergy demand by Ort, Donald R, Sabeeha S. Merchant, Jean Alric, Alice Barkan, Robert E. Blankenship, Ralph Bock, Roberta Croce, Maureen R. Hanson, Julian M. Hibberd, Stephen P. Long, Thomas A. Moore, James Moroney, Krishna K. Niyogi, Martin A. J. Parry, Pamela P. Peralta-Yahya, Roger C. Prince, Kevin E. Redding, Martin H. Spalding, Klaas J. van Wijk, Wim F. J. Vermaas, Susanne von Caemmerer, Andreas P. M. Weber, Todd O. Yeates, Joshua S. Yuan, Xin Guang Zhu

“…The world’s crop productivity is stagnating whereas population growth, rising affluence, and mandates for biofuels put increasing demands on agriculture…”
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Regulation of Gene Expression Required for C4 Photosynthesis by Hibberd, Julian M, Covshoff, Sarah

“…C(4) photosynthesis is normally associated with the compartmentation of photosynthesis between mesophyll (M) and bundle sheath (BS) cells. The mechanisms…”
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Chloroplast development in green plant tissues: the interplay between light, hormone, and transcriptional regulation by Cackett, Lee, Luginbuehl, Leonie H., Schreier, Tina B., Lopez‐Juez, Enrique, Hibberd, Julian M.

“…Summary Chloroplasts are best known for their role in photosynthesis, but they also allow nitrogen and sulphur assimilation, amino acid, fatty acid, nucleotide…”
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Deep evolutionary comparison of gene expression identifies parallel recruitment of trans-factors in two independent origins of C4 photosynthesis by Aubry, Sylvain, Kelly, Steven, Kümpers, Britta M C, Smith-Unna, Richard D, Hibberd, Julian M

“…With at least 60 independent origins spanning monocotyledons and dicotyledons, the C4 photosynthetic pathway represents one of the most remarkable examples of…”
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Photosynthesis-independent production of reactive oxygen species in the rice bundle sheath during high light is mediated by NADPH oxidase by Xiong, Haiyan, Hua, Lei, Reyna-Llorens, Ivan, Shi, Yi, Chen, Kun-Ming, Smirnoff, Nicholas, Kromdijk, Johannes, Hibberd, Julian M.

“…When exposed to high light, plants produce reactive oxygen species (ROS). In Arabidopsis thaliana, local stress such as excess heat or light initiates a…”
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Recruitment of pre-existing networks during the evolution of C₄ photosynthesis by Reyna-Llorens, Ivan, Hibberd, Julian M.

“…During C₄ photosynthesis, CO₂ is concentrated around the enzyme RuBisCO. The net effect is to reduce photorespiration while increasing water and nitrogen use…”
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Recruitment of pre-existing networks during the evolution of C 4 photosynthesis by Reyna-Llorens, Ivan, Hibberd, Julian M

“…During C photosynthesis, CO is concentrated around the enzyme RuBisCO. The net effect is to reduce photorespiration while increasing water and nitrogen use…”
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Independent and Parallel Evolution of New Genes by Gene Duplication in Two Origins of C4 Photosynthesis Provides New Insight into the Mechanism of Phloem Loading in C4 Species by Emms, David M, Covshoff, Sarah, Hibberd, Julian M, Kelly, Steven

“…C4 photosynthesis is considered one of the most remarkable examples of evolutionary convergence in eukaryotes. However, it is unknown whether the evolution of…”
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A Major Advance in Plastid Transformation by Hibberd, Julian M.

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Phytochrome B regulates reactive oxygen signaling during abiotic and biotic stress in plants by Fichman, Yosef, Xiong, Haiyan, Sengupta, Soham, Morrow, Johanna, Loog, Hailey, Azad, Rajeev K., Hibberd, Julian M., Liscum, Emmanuel, Mittler, Ron

“…Summary Reactive oxygen species (ROS) and the photoreceptor protein phytochrome B (phyB) play a key role in plant acclimation to stress. However, how phyB that…”
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A rapid and robust leaf ablation method to visualize bundle sheath cells and chloroplasts in C 3 and C 4 grasses by Billakurthi, Kumari, Hibberd, Julian M

“…It has been proposed that engineering the C photosynthetic pathway into C crops could significantly increase yield. This goal requires an increase in the…”
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Rice bundle sheath cell shape is regulated by the timing of light exposure during leaf development by Plackett, Andrew R. G., Hibberd, Julian M.

“…Plant leaves contain multiple cell types which achieve distinct characteristics whilst still coordinating development within the leaf. The bundle sheath…”
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A rapid and robust leaf ablation method to visualize bundle sheath cells and chloroplasts in C3 and C4 grasses by Billakurthi, Kumari, Hibberd, Julian M

“…It has been proposed that engineering the C.sub.4 photosynthetic pathway into C.sub.3 crops could significantly increase yield. This goal requires an increase…”
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Using breeding and quantitative genetics to understand the C4 pathway by Simpson, Conor J C, Reeves, Gregory, Tripathi, Anoop, Singh, Pallavi, Hibberd, Julian M

“…Reducing photorespiration in C3 crops could significantly increase rates of photosynthesis and yield. One method to achieve this would be to integrate C4…”
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Droplet-based microfluidic analysis and screening of single plant cells by Yu, Ziyi, Boehm, Christian R, Hibberd, Julian M, Abell, Chris, Haseloff, Jim, Burgess, Steven J, Reyna-Llorens, Ivan

“…Droplet-based microfluidics has been used to facilitate high-throughput analysis of individual prokaryote and mammalian cells. However, there is a scarcity of…”
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The bundle sheath of rice is conditioned to play an active role in water transport as well as sulfur assimilation and jasmonic acid synthesis by Hua, Lei, Stevenson, Sean R., Reyna‐Llorens, Ivan, Xiong, Haiyan, Kopriva, Stanislav, Hibberd, Julian M.

“…Summary Leaves comprise multiple cell types but our knowledge of the patterns of gene expression that underpin their functional specialization is fragmentary…”
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Lineage-specific gene radiations underlie the evolution of novel betalain pigmentation in Caryophyllales by Brockington, Samuel F, Yang, Ya, Gandia-Herrero, Fernando, Covshoff, Sarah, Hibberd, Julian M, Sage, Rowan F, Wong, Gane K S, Moore, Michael J, Smith, Stephen A

“…Betalain pigments are unique to the Caryophyllales and structurally and biosynthetically distinct from anthocyanins. Two key enzymes within the betalain…”
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Genome-Wide Transcription Factor Binding in Leaves from C 3 and C 4 Grasses by Burgess, Steven J, Reyna-Llorens, Ivan, Stevenson, Sean R, Singh, Pallavi, Jaeger, Katja, Hibberd, Julian M

“…The majority of plants use C photosynthesis, but over 60 independent lineages of angiosperms have evolved the C pathway. In most C species, photosynthesis gene…”
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