Search Results - "Herrera Paredes, Sur"

Giving back to the community: microbial mechanisms of plant—soil interactions by Paredes, Sur Herrera, Lebeis, Sarah L.

“…Summary The role of both plants and soil microbes on ecosystem functioning has been long recognized, but the precise feedback mechanisms between them are more…”
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Defining the core Arabidopsis thaliana root microbiome by Lundberg, Derek S., Lebeis, Sarah L., Paredes, Sur Herrera, Yourstone, Scott, Gehring, Jase, Malfatti, Stephanie, Tremblay, Julien, Engelbrektson, Anna, Kunin, Victor, Rio, Tijana Glavina del, Edgar, Robert C., Eickhorst, Thilo, Ley, Ruth E., Hugenholtz, Philip, Tringe, Susannah Green, Dangl, Jeffery L.

“…Sequencing of the Arabidopsis thaliana root microbiome shows that its composition is strongly influenced by location, inside or outside the root, and by soil…”
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Design of synthetic bacterial communities for predictable plant phenotypes by Herrera Paredes, Sur, Gao, Tianxiang, Law, Theresa F, Finkel, Omri M, Mucyn, Tatiana, Teixeira, Paulo José Pereira Lima, Salas González, Isaí, Feltcher, Meghan E, Powers, Matthew J, Shank, Elizabeth A, Jones, Corbin D, Jojic, Vladimir, Dangl, Jeffery L, Castrillo, Gabriel

“…Specific members of complex microbiota can influence host phenotypes, depending on both the abiotic environment and the presence of other microorganisms…”
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Wide-ranging consequences of priority effects governed by an overarching factor by Chappell, Callie R, Dhami, Manpreet K, Bitter, Mark C, Czech, Lucas, Herrera Paredes, Sur, Barrie, Fatoumata Binta, Calderón, Yadira, Eritano, Katherine, Golden, Lexi-Ann, Hekmat-Scafe, Daria, Hsu, Veronica, Kieschnick, Clara, Malladi, Shyamala, Rush, Nicole, Fukami, Tadashi

“…Priority effects, where arrival order and initial relative abundance modulate local species interactions, can exert taxonomic, functional, and evolutionary…”
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Transcriptional Responses to Priority Effects in Nectar Yeast by Chappell, Callie R, Goddard, Pagé C, Golden, Lexi-Ann, Hernandez, Jonathan, Ortiz Chavez, Daniela, Hossine, Marziiah, Herrera Paredes, Sur, VanValkenburg, Ethan, Nell, Lucas A, Fukami, Tadashi, Dhami, Manpreet K

“…Priority effects, where the order and timing of species arrival influence the assembly of ecological communities, have been observed in a variety of taxa and…”
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Understanding and exploiting plant beneficial microbes by Finkel, Omri M, Castrillo, Gabriel, Herrera Paredes, Sur, Salas González, Isai, Dangl, Jeffery L

“…•Soil microbiomes induce reproducible plant phenotypes.•Large collections of plant-associated microbes are available for research.•Plant growth promoting…”
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Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa by Lebeis, Sarah L., Paredes, Sur Herrera, Lundberg, Derek S., Breakfield, Natalie, Gehring, Jase, McDonald, Meredith, Malfatti, Stephanie, del Rio, Tijana Glavina, Jones, Corbin D., Tringe, Susannah G., Dangl, Jeffery L.

“…Immune systems distinguish "self" from "nonself" to maintain homeostasis and must differentially gate access to allow colonization by potentially beneficial,…”
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GRINS: Genetic elements that recode assembly-line polyketide synthases and accelerate their diversification by Nivina, Aleksandra, Paredes, Sur Herrera, Fraser, Hunter B., Khosla, Chaitan

“…Assembly-line polyketide synthases (PKSs) are large and complex enzymatic machineries with a multimodular architecture, typically encoded in bacterial genomes…”
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Root microbiota drive direct integration of phosphate stress and immunity by Castrillo, Gabriel, Teixeira, Paulo José Pereira Lima, Paredes, Sur Herrera, Law, Theresa F., de Lorenzo, Laura, Feltcher, Meghan E., Finkel, Omri M., Breakfield, Natalie W., Mieczkowski, Piotr, Jones, Corbin D., Paz-Ares, Javier, Dangl, Jeffery L.

“…Plants live in biogeochemically diverse soils with diverse microbiota. Plant organs associate intimately with a subset of these microbes, and the structure of…”
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Genomic features of bacterial adaptation to plants by Levy, Asaf, Salas Gonzalez, Isai, Mittelviefhaus, Maximilian, Clingenpeel, Scott, Herrera Paredes, Sur, Miao, Jiamin, Wang, Kunru, Devescovi, Giulia, Stillman, Kyra, Monteiro, Freddy, Rangel Alvarez, Bryan, Lundberg, Derek S., Lu, Tse-Yuan, Lebeis, Sarah, Jin, Zhao, McDonald, Meredith, Klein, Andrew P., Feltcher, Meghan E., Rio, Tijana Glavina, Grant, Sarah R., Doty, Sharon L., Ley, Ruth E., Zhao, Bingyu, Venturi, Vittorio, Pelletier, Dale A., Vorholt, Julia A., Tringe, Susannah G., Woyke, Tanja, Dangl, Jeffery L.

“…Plants intimately associate with diverse bacteria. Plant-associated bacteria have ostensibly evolved genes that enable them to adapt to plant environments…”
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Myeloid deficiency of the intrinsic clock protein BMAL1 accelerates cognitive aging by disrupting microglial synaptic pruning by Iweka, Chinyere Agbaegbu, Seigneur, Erica, Hernandez, Amira Latif, Paredes, Sur Herrera, Cabrera, Mica, Blacher, Eran, Pasternak, Connie Tsai, Longo, Frank M, de Lecea, Luis, Andreasson, Katrin I

“…Aging is associated with loss of circadian immune responses and circadian gene transcription in peripheral macrophages. Microglia, the resident macrophages of…”
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The antipsychotic olanzapine interacts with the gut microbiome to cause weight gain in mouse by Morgan, Andrew P, Crowley, James J, Nonneman, Randal J, Quackenbush, Corey R, Miller, Cheryl N, Ryan, Allison K, Bogue, Molly A, Paredes, Sur Herrera, Yourstone, Scott, Carroll, Ian M, Kawula, Thomas H, Bower, Maureen A, Sartor, R Balfour, Sullivan, Patrick F

“…The second-generation antipsychotic olanzapine is effective in reducing psychotic symptoms but can cause extreme weight gain in human patients. We investigated…”
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Promoter-proximal CCCTC-factor binding is associated with an increase in the transcriptional pausing index by Paredes, Sur Herrera, Melgar, Michael F, Sethupathy, Praveen

“…It has been known for more than 2 decades that after RNA polymerase II (RNAPII) initiates transcription, it can enter into a paused or stalled state…”
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Understanding the Plant Microbiome by Herrera Paredes, Sur

“…Plants live in a microbial world and microbes have been known to influence plant health for more than a century. Remarkable progress has been made in…”
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Defining the core Arabidopsis thaliana root microbiome by Lundberg, Derek S, Lebeis, Sarah L, Paredes, Sur Herrera, Yourstone, Scott, Gehring, Jase, Malfatti, Stephanie, Tremblay, Julien, Engelbrektson, Anna, Kunin, Victor, Rio, Tijana Glavinadel, Edgar, Robert C, Eickhorst, Thilo, Ley, Ruth E, Hugenholtz, Philip, Tringe, Susannah Green, Dang, Jeffery L

“…Land plants associate with a root microbiota distinct from the complex microbial community present in surrounding soil. The microbiota colonizing the…”
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Defining the core Arabidopsis thaliana root microbiome by Lundberg, Derek S, Lebeis, Sarah L, Paredes, Sur Herrera, Yourstone, Scott, Gehring, Jase, Malfatti, Stephanie, Tremblay, Julien, Engelbrektson, Anna, Kunin, Victor, del Rio, Tijana Glavina, Edgar, Robert C, Eickhorst, Thilo, Ley, Ruth E, Hugenholtz, Philip, Tringe, Susannah Green, Dang, Jeffery L

“…Land plants associate with a root microbiota distinct from the complex microbial community present in surrounding soil. The microbiota colonizing the…”
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PLANT MICROBIOME. Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa by Lebeis, Sarah L, Paredes, Sur Herrera, Lundberg, Derek S, Breakfield, Natalie, Gehring, Jase, McDonald, Meredith, Malfatti, Stephanie, Glavina del Rio, Tijana, Jones, Corbin D, Tringe, Susannah G, Dangl, Jeffery L

“…Immune systems distinguish "self" from "nonself" to maintain homeostasis and must differentially gate access to allow colonization by potentially beneficial,…”
Get full text

The Antipsychotic Olanzapine Interacts with the Gut Microbiome to Cause Weight Gain in Mouse: e115225 by Morgan, Andrew P, Crowley, James J, Nonneman, Randal J, Quackenbush, Corey R, Miller, Cheryl N, Ryan, Allison K, Bogue, Molly A, Paredes, Sur Herrera, Yourstone, Scott, Carroll, Ian M

“…The second-generation antipsychotic olanzapine is effective in reducing psychotic symptoms but can cause extreme weight gain in human patients. We investigated…”
Get full text