Search Results - "Hebert, Alex"

A Molecular Portrait of De Novo Genes in Yeasts by Vakirlis, Nikolaos, Hebert, Alex S, Opulente, Dana A, Achaz, Guillaume, Hittinger, Chris Todd, Fischer, Gilles, Coon, Joshua J, Lafontaine, Ingrid

“…New genes, with novel protein functions, can evolve "from scratch" out of intergenic sequences. These de novo genes can integrate the cell's genetic network…”
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A Quantitative Map of the Liver Mitochondrial Phosphoproteome Reveals Posttranslational Control of Ketogenesis by Grimsrud, Paul A., Carson, Joshua J., Hebert, Alex S., Hubler, Shane L., Niemi, Natalie M., Bailey, Derek J., Jochem, Adam, Stapleton, Donald S., Keller, Mark P., Westphall, Michael S., Yandell, Brian S., Attie, Alan D., Coon, Joshua J., Pagliarini, David J.

“…Mitochondria are dynamic organelles that play a central role in a diverse array of metabolic processes. Elucidating mitochondrial adaptations to changing…”
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Multiplexed proteome analysis with neutron-encoded stable isotope labeling in cells and mice by Overmyer, Katherine A, Tyanova, Stefka, Hebert, Alex S, Westphall, Michael S, Cox, Jürgen, Coon, Joshua J

“…This NeuCode SILAC/SILAM protocol uses neutron-coded lysine derivatives to improve stable isotope labeling of amino acids in cells or mice, enabling…”
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Conserved Lipid and Small-Molecule Modulation of COQ8 Reveals Regulation of the Ancient Kinase-like UbiB Family by Reidenbach, Andrew G, Kemmerer, Zachary A, Aydin, Deniz, Jochem, Adam, McDevitt, Molly T, Hutchins, Paul D, Stark, Jaime L, Stefely, Jonathan A, Reddy, Thiru, Hebert, Alex S, Wilkerson, Emily M, Johnson, Isabel E, Bingman, Craig A, Markley, John L, Coon, Joshua J, Dal Peraro, Matteo, Pagliarini, David J

“…Human COQ8A (ADCK3) and Saccharomyces cerevisiae Coq8p (collectively COQ8) are UbiB family proteins essential for mitochondrial coenzyme Q (CoQ) biosynthesis…”
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Conditional deletion of melanin-concentrating hormone receptor 1 from GABAergic neurons increases locomotor activity by Chee, Melissa J., Hebert, Alex J., Briançon, Nadege, Flaherty, Stephen E., Pissios, Pavlos, Maratos-Flier, Eleftheria

“…Melanin-concentrating hormone (MCH) plays a key role in regulating energy balance. MCH acts via its receptor MCHR1, and MCHR1 deletion increases energy…”
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Phosphorylation Dynamics Dominate the Regulated Proteome during Early Xenopus Development by Peuchen, Elizabeth H., Cox, Olivia F., Sun, Liangliang, Hebert, Alex S., Coon, Joshua J., Champion, Matthew M., Dovichi, Norman J., Huber, Paul W.

“…The earliest stages of animal development are largely controlled by changes in protein phosphorylation mediated by signaling pathways and cyclin-dependent…”
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Genome-Scale Transcription-Translation Mapping Reveals Features of Zymomonas mobilis Transcription Units and Promoters by Vera, Jessica M., Ghosh, Indro Neil, Zhang, Yaoping, Hebert, Alex S., Coon, Joshua J., Landick, Robert

“…Efforts to rationally engineer synthetic pathways in Zymomonas mobilis are impeded by a lack of knowledge and tools for predictable and quantitative…”
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Expression of novel “LOCGEF” isoforms of ARHGEF18 in eosinophils by Turton, Keren B., Wilkerson, Emily M., Hebert, Alex S., Fogerty, Frances J., Schira, Hazel M., Botros, Fady E., Coon, Joshua J., Mosher, Deane F.

“…Genomic, transcriptomic and proteomic databases indicate that the N‐terminal 322 residues encoded by the presumptive LOC100996504 gene, which is adjacent to…”
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Chemical genomic guided engineering of gamma-valerolactone tolerant yeast by Bottoms, Scott, Dickinson, Quinn, McGee, Mick, Hinchman, Li, Higbee, Alan, Hebert, Alex, Serate, Jose, Xie, Dan, Zhang, Yaoping, Coon, Joshua J, Myers, Chad L, Landick, Robert, Piotrowski, Jeff S

“…Gamma valerolactone (GVL) treatment of lignocellulosic bomass is a promising technology for degradation of biomass for biofuel production; however, GVL is…”
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Author Correction: Phosphorylation Dynamics Dominate the Regulated Proteome during Early Xenopus Development by Peuchen, Elizabeth H., Cox, Olivia F., Sun, Liangliang, Hebert, Alex S., Coon, Joshua J., Champion, Matthew M., Dovichi, Norman J., Huber, Paul W.

“…A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper…”
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Quantitative capillary zone electrophoresis-mass spectrometry reveals the N-glycome developmental plan during vertebrate embryogenesis by Qu, Yanyan, Dubiak, Kyle M, Peuchen, Elizabeth H, Champion, Matthew M, Zhang, Zhenbin, Hebert, Alex S, Wright, Sarah, Coon, Joshua J, Huber, Paul W, Dovichi, Norman J

“…Glycans are known to be involved in many biological processes, while little is known about the expression of N-glycans during vertebrate development. We now…”
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The role of metal substitutions in the development of Li batteries, part I: cathodes by Hebert, Alex, McCalla, Eric

“…Metal substitutions into known structures have served a pivotal role in developing two of the three main components in state-of-the-art Li-ion batteries: the…”
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Development of High-Throughput Methods for Sodium-Ion Battery Cathodes by Adhikari, Tham, Hebert, Alex, Adamič, Michel, Yao, Jacqueline, Potts, Karlie, McCalla, Eric

“…Combinatorial synthesis of Li-ion batteries has proven extremely powerful in screening complex compositional spaces for next-generation materials. To date, no…”
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Combinatorial methods in advanced battery materials design by McCalla, Eric, Parmaklis, Matthew, Rehman, Sarish, Anderson, Ethan, Jia, Shipeng, Hebert, Alex, Potts, Karlie, Jonderian, Antranik, Adhikari, Tham, Adamič, Michel

“…In the search for better performing battery materials, researchers have increasingly ventured into complex composition spaces, including numerous…”
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Multi-plexed proteome analysis with neutron-encoded stable isotope labeling in cells and mice by Overmyer, Katherine A., Tyanova, Stefka, Hebert, Alex S., Westphall, Michael S., Cox, Jürgen, Coon, Joshua J.

“…We describe a protocol for multiplexed proteomic analysis using neutron-encoded (NeuCode) stable isotope labeling of amino acids in cells (SILAC) or mice…”
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Genome-Scale Transcription-Translation Mapping Reveals Features of Zymomonas mobilis Transcription Units and Promoters by Vera, Jessica M., Ghosh, Indro Neil, Zhang, Yaoping, Hebert, Alex S., Coon, Joshua J., Landick, Robert, Traxler, Matthew F.

“…Efforts to rationally engineer synthetic pathways in<named-content content-type='genus-species'>Zymomonas mobilis</named-content>are impeded by a lack of…”
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Chemical genomic guided engineering of gamma-valerolactone tolerant yeast by Bottoms, Scott, Dickinson, Quinn, McGee, Mick, Hinchman, Li, Higbee, Alan, Hebert, Alex, Serate, Jose, Xie, Dan, Zhang, Yaoping, Coon, Joshua J., Myers, Chad L., Landick, Robert, Piotrowski, Jeff S.

“…Gamma valerolactone (GVL) treatment of lignocellulosic bomass is a promising technology for degradation of biomass for biofuel production; however, GVL is…”
Get full text

A quantitative map of the liver mitochondrial phosphoproteome reveals post-translational control of ketogenesis by Grimsrud, Paul A., Carson, Joshua J., Hebert, Alex S., Hubler, Shane L., Niemi, Natalie M., Bailey, Derek J., Jochem, Adam, Stapleton, Donald S., Keller, Mark P., Westphall, Michael S., Yandell, Brian S., Attie, Alan D., Coon, Joshua J., Pagliarini, David J.

“…Mitochondria are dynamic organelles that play a central role in a diverse array of metabolic processes. Elucidating mitochondrial adaptations to changing…”
Get full text