Search Results - "Head, Steven R"

long noncoding RNA THRIL regulates TNFα expression through its interaction with hnRNPL by Li, Zhonghan, Chao, Ti-Chun, Chang, Kung-Yen, Lin, Nianwei, Patil, Veena S., Shimizu, Chisato, Head, Steven R., Burns, Jane C., Rana, Tariq M.

“…Thousands of large intergenic noncoding RNAs (lincRNAs) have been identified in the mammalian genome, many of which have important roles in regulating a…”
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An Evolutionarily Conserved Long Noncoding RNA TUNA Controls Pluripotency and Neural Lineage Commitment by Lin, Nianwei, Chang, Kung-Yen, Li, Zhonghan, Gates, Keith, Rana, Zacharia A., Dang, Jason, Zhang, Danhua, Han, Tianxu, Yang, Chao-Shun, Cunningham, Thomas J., Head, Steven R., Duester, Gregg, Dong, P. Duc Si, Rana, Tariq M.

“…Here, we generated a genome-scale shRNA library targeting long intergenic noncoding RNAs (lincRNAs) in the mouse. We performed an unbiased loss-of-function…”
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Library construction for next-generation sequencing: overviews and challenges by Head, Steven R, Komori, H Kiyomi, LaMere, Sarah A, Whisenant, Thomas, Van Nieuwerburgh, Filip, Salomon, Daniel R, Ordoukhanian, Phillip

“…High-throughput sequencing, also known as next-generation sequencing (NGS), has revolutionized genomic research. In recent years, NGS technology has steadily…”
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Directional RNA deep sequencing sheds new light on the transcriptional response of Anabaena sp. strain PCC 7120 to combined-nitrogen deprivation by Flaherty, Britt L, Van Nieuwerburgh, F, Head, Steven R, Golden, James W

“…Cyanobacteria are potential sources of renewable chemicals and biofuels and serve as model organisms for bacterial photosynthesis, nitrogen fixation, and…”
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Technical Variations in Low-Input RNA-seq Methodologies by Bhargava, Vipul, Head, Steven R., Ordoukhanian, Phillip, Mercola, Mark, Subramaniam, Shankar

“…Recent advances in RNA-seq methodologies from limiting amounts of mRNA have facilitated the characterization of rare cell-types in various biological systems…”
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Noncoding transcription within the Igh distal VH region at PAIR elements affects the 3D structure of the Igh locus in pro-B cells by Verma-Gaur, Jiyoti, Torkamani, Ali, Schaffer, Lana, Head, Steven R, Schork, Nicholas J, Feeney, Ann J

“…Noncoding sense and antisense germ-line transcription within the Ig heavy chain locus precedes V(D)J recombination and has been proposed to be associated with…”
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Transfection of microRNA Mimics Should Be Used with Caution by Jin, Hyun Yong, Gonzalez-Martin, Alicia, Miletic, Ana V, Lai, Maoyi, Knight, Sarah, Sabouri-Ghomi, Mohsen, Head, Steven R, Macauley, Matthew S, Rickert, Robert C, Xiao, Changchun

“…Transient transfection of chemically synthesized microRNA (miRNA) mimics is being used extensively to study the functions and mechanisms of endogenous miRNAs…”
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Loss of GCNT2/I-branched glycans enhances melanoma growth and survival by Sweeney, Jenna Geddes, Liang, Jennifer, Antonopoulos, Aristotelis, Giovannone, Nicholas, Kang, Shuli, Mondala, Tony S., Head, Steven R., King, Sandra L., Tani, Yoshihiko, Brackett, Danielle, Dell, Anne, Murphy, George F., Haslam, Stuart M., Widlund, Hans R., Dimitroff, Charles J.

“…Cancer cells often display altered cell-surface glycans compared to their nontransformed counterparts. However, functional contributions of glycans to cancer…”
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Increased sensitivity using real-time dPCR for detection of SARS-CoV-2 by Duong, Kyra, Ou, Jiajia, Li, Zhaoliang, Lv, Zhaoqing, Dong, Hao, Hu, Tao, Zhang, Yunyun, Hanna, Ava, Gordon, Skyler, Crynen, Gogce, Head, Steven R, Ordoukhanian, Phillip, Wang, Yan

“…A real-time dPCR system was developed to improve the sensitivity, specificity and quantification accuracy of end point dPCR. We compared three technologies –…”
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Differential Sensitivity of Target Genes to Translational Repression by miR-17~92 by Jin, Hyun Yong, Oda, Hiroyo, Chen, Pengda, Yang, Chao, Zhou, Xiaojuan, Kang, Seung Goo, Valentine, Elizabeth, Kefauver, Jennifer M, Liao, Lujian, Zhang, Yaoyang, Gonzalez-Martin, Alicia, Shepherd, Jovan, Morgan, Gareth J, Mondala, Tony S, Head, Steven R, Kim, Pyeung-Hyeun, Xiao, Nengming, Fu, Guo, Liu, Wen-Hsien, Han, Jiahuai, Williamson, James R, Xiao, Changchun

“…MicroRNAs (miRNAs) are thought to exert their functions by modulating the expression of hundreds of target genes and each to a small degree, but it remains…”
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Identification of Key Determinants of Staphylococcus aureus Vaginal Colonization by Deng, Liwen, Schilcher, Katrin, Burcham, Lindsey R, Kwiecinski, Jakub M, Johnson, Paige M, Head, Steven R, Heinrichs, David E, Horswill, Alexander R, Doran, Kelly S

“…is an important pathogen responsible for nosocomial and community-acquired infections in humans, and methicillin-resistant (MRSA) infections have continued to…”
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Genome-wide identification of Bcl11b gene targets reveals role in brain-derived neurotrophic factor signaling by Tang, Bin, Di Lena, Pietro, Schaffer, Lana, Head, Steven R, Baldi, Pierre, Thomas, Elizabeth A

“…B-cell leukemia/lymphoma 11B (Bcl11b) is a transcription factor showing predominant expression in the striatum. To date, there are no known gene targets of…”
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Quantitative bias in Illumina TruSeq and a novel post amplification barcoding strategy for multiplexed DNA and small RNA deep sequencing by Van Nieuwerburgh, Filip, Soetaert, Sandra, Podshivalova, Katie, Ay-Lin Wang, Eileen, Schaffer, Lana, Deforce, Dieter, Salomon, Daniel R, Head, Steven R, Ordoukhanian, Phillip

“…Here we demonstrate a method for unbiased multiplexed deep sequencing of RNA and DNA libraries using a novel, efficient and adaptable barcoding strategy called…”
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Defining the Pseudomonas aeruginosa SOS Response and Its Role in the Global Response to the Antibiotic Ciprofloxacin by CIRZ, Ryan T, O'NEILL, Bryan M, HAMMOND, Jennifer A, HEAD, Steven R, ROMESBERG, Floyd E

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Seasonal dynamics of DNA and RNA viral bioaerosol communities in a daycare center by Prussin, 2nd, Aaron J, Torres, Pedro J, Shimashita, John, Head, Steven R, Bibby, Kyle J, Kelley, Scott T, Marr, Linsey C

“…Viruses play an important role in ecosystems, including the built environment (BE). While numerous studies have characterized bacterial and fungal microbiomes…”
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Shared and Compartment‐Specific Processes in Nucleus Pulposus and Annulus Fibrosus During Intervertebral Disc Degeneration by Swahn, Hannah, Mertens, Jasmin, Olmer, Merissa, Myers, Kevin, Mondala, Tony S., Natarajan, Padmaja, Head, Steven R., Alvarez‐Garcia, Oscar, Lotz, Martin K.

“…Elucidating how cell populations promote onset and progression of intervertebral disc degeneration (IDD) has the potential to enable more precise therapeutic…”
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Kinetic analysis of a complete poxvirus transcriptome reveals an immediate-early class of genes by Assarsson, Erika, Greenbaum, Jason A, Sundström, Magnus, Schaffer, Lana, Hammond, Jennifer A, Pasquetto, Valerie, Oseroff, Carla, Hendrickson, R. Curtis, Lefkowitz, Elliot J, Tscharke, David C, Sidney, John, Grey, Howard M, Head, Steven R, Peters, Bjoern, Sette, Alessandro

“…Vaccinia virus is the prototypic orthopoxvirus and was the vaccine used to eradicate smallpox, yet the expression profiles of many of its genes remain unknown…”
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A genome-wide survey of mutations in the Jurkat cell line by Gioia, Louis, Siddique, Azeem, Head, Steven R, Salomon, Daniel R, Su, Andrew I

“…The Jurkat cell line has an extensive history as a model of T cell signaling. But at the turn of the 21st century, some expression irregularities were…”
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Helicobacter pylori induces β3GnT5 in human gastric cell lines, modulating expression of the SabA ligand sialyl–Lewis x by Marcos, Nuno T, Magalhaes, Ana, Ferreira, Bibiana, Oliveira, Maria J, Carvalho, Ana S, Mendes, Nuno, Gilmartin, Tim, Head, Steven R, Figueiredo, Ceu, David, Leonor, Santos-Silva, Filipe, Reis, Celso A

“…Chronic Helicobacter pylori infection is recognized as a cause of gastric cancer. H. pylori adhesion to gastric cells is mediated by bacterial adhesins such as…”
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Evidence for disruption of sphingolipid metabolism in schizophrenia by Narayan, Sujatha, Head, Steven R., Gilmartin, Timothy J., Dean, Brian, Thomas, Elizabeth A.

“…As the field of glycobiology grows, important roles for glycolipids and glycoproteins in neurological disorders are being increasingly appreciated. However,…”
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