Search Results - "He, Caisheng"
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Real-time artificial intelligence for detection of upper gastrointestinal cancer by endoscopy: a multicentre, case-control, diagnostic study
Published in The lancet oncology (01-12-2019)“…Upper gastrointestinal cancers (including oesophageal cancer and gastric cancer) are the most common cancers worldwide. Artificial intelligence platforms using…”
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Development and validation of an endoscopic images‐based deep learning model for detection with nasopharyngeal malignancies
Published in Cancer communications (London, England) (25-09-2018)“…Background Due to the occult anatomic location of the nasopharynx and frequent presence of adenoid hyperplasia, the positive rate for malignancy identification…”
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Missing value imputation for microarray gene expression data using histone acetylation information
Published in BMC bioinformatics (29-05-2008)“…It is an important pre-processing step to accurately estimate missing values in microarray data, because complete datasets are required in numerous expression…”
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New insights into two distinct nucleosome distributions: comparison of cross-platform positioning datasets in the yeast genome
Published in BMC genomics (15-01-2010)“…Recently, a number of high-resolution genome-wide maps of nucleosome locations in S. cerevisiae have been derived experimentally. However, nucleosome positions…”
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Genome-wide analysis of the effect of histone modifications on the coexpression of neighboring genes in Saccharomyces cerevisiae
Published in BMC genomics (09-10-2010)“…Neighboring gene pairs in the genome of Saccharomyces cerevisiae have a tendency to be expressed at the same time. The distribution of histone modifications…”
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Genome-wide analysis of interactions between ATP-dependent chromatin remodeling and histone modifications
Published in BMC genomics (08-07-2009)“…ATP-dependent chromatin remodeling and the covalent modification of histones play central roles in determining chromatin structure and function. Although…”
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Transcriptional interaction-assisted identification of dynamic nucleosome positioning
Published in BMC bioinformatics (30-01-2009)“…Nucleosomes regulate DNA accessibility and therefore play a central role in transcription control. Computational methods have been developed to predict static…”
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Two distinct modes of nucleosome modulation associated with different degrees of dependence of nucleosome positioning on the underlying DNA sequence
Published in BMC genomics (10-01-2009)“…The nucleosome is the fundamental unit of eukaryotic genomes. Its positioning plays a central role in diverse cellular processes that rely on access to genomic…”
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A simulation model for nucleosome distribution in the yeast genome based on integrated cross-platform positioning datasets
Published in Mathematical and computer modelling (01-12-2010)“…In-depth analysis of six recent experimental nucleosome datasets in the yeast reveals broad disagreements between the final nucleosome positions detected by…”
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Journal Article Conference Proceeding -
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Identifying the Combinatorial Effects of Histone Modifications by Association Rule Mining in Yeast
Published in Evolutionary bioinformatics online (01-01-2010)“…Jiang Wang, Xianhua Dai, Qian Xiang, Yangyang Deng, Jihua Feng, Zhiming Dai and Caisheng HeDepartment of Electronics and Communications Engineering, School of…”
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Journal Article -
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Development of a self-constrained 3D DenseNet model in automatic detection and segmentation of nasopharyngeal carcinoma using magnetic resonance images
Published in Oral oncology (01-11-2020)“…•A dual-task AI model was developed to detect and segment NPC in MRI automatically.•The model showed higher overall accuracy than experienced radiologists to…”
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A deep survival analysis method based on ranking
Published in Artificial intelligence in medicine (01-07-2019)“…•The proposed RankDeepSurv is superior to three state-of-the-art survival models.•This paper proposes a loss function based on regression and rank constraints…”
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Seasonal and vegetational variations of culturable bacteria concentrations in air from urban forest parks: a case study in Hunan, China
Published in Environmental science and pollution research international (01-04-2022)“…It is important to investigate the airborne bacterial air quality in urban forest parks as tree bacteriostasis practices are being increasingly advocated as…”
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Identification of DNA motifs by two different models
Published in 2010 IEEE Fifth International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA) (01-09-2010)“…The identification of DNA regulatory motifs (transcription factor binding sites) in co-regulated genes is essential for understanding the regulatory…”
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Conference Proceeding -
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Insights into the combinatorial effects of histone modifications in yeast using association rule mining
Published in 2010 IEEE Fifth International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA) (01-09-2010)“…Eukaryotic genomes are packaged into chromatin by histone proteins whose chemical modification can profoundly influence gene expression. The histone…”
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Conference Proceeding -
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Identifying the Combinatorial Effects of Histone Modifications by Association Rule Mining in Yeast
Published in Evolutionary bioinformatics online (01-09-2010)“…Eukaryotic genomes are packaged into chromatin by histone proteins whose chemical modification can profoundly influence gene expression. The histone…”
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基于内镜图像深度学习的鼻咽恶性肿瘤检测 模型的建立与验证
Published in 癌症 (2019)“…背景与目的 由于鼻咽部解剖位置隐匿且腺体增生频发,活检时恶性肿瘤的阳性率较低,从而导致初诊时鼻咽恶性肿瘤确诊延时或漏诊.本文旨在建立一种人工智能工具——基于深度学习的内镜检查,来检测鼻咽恶性肿瘤.方法 建立了一种基于内镜图像的鼻咽恶性肿瘤检测模型(endoscopic images-based…”
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Journal Article -
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A position-slots model for nucleosome assembly in the yeast genome based on integrated multi-platform positioning dataseis
Published in 2009 Fourth International on Conference on Bio-Inspired Computing (01-10-2009)“…In-depth analysis of the recent five experimental nucleosome datasets reveals the broad disagreements between the final nucleosome positions detected by the…”
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Conference Proceeding