Search Results - "Haslum, Johan Fredin"

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  1. 1

    Cell Painting-based bioactivity prediction boosts high-throughput screening hit-rates and compound diversity by Fredin Haslum, Johan, Lardeau, Charles-Hugues, Karlsson, Johan, Turkki, Riku, Leuchowius, Karl-Johan, Smith, Kevin, Müllers, Erik

    Published in Nature communications (24-04-2024)
    “…Identifying active compounds for a target is a time- and resource-intensive task in early drug discovery. Accurate bioactivity prediction using morphological…”
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    Journal Article
  2. 2

    Bridging Generalization Gaps in High Content Imaging Through Online Self-Supervised Domain Adaptation by Haslum, Johan Fredin, Matsoukas, Christos, Leuchowius, Karl-Johan, Smith, Kevin

    “…High Content Imaging (HCI) plays a vital role in modern drug discovery and development pipelines, facilitating various stages from hit identification to…”
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    Conference Proceeding
  3. 3

    Are Natural Domain Foundation Models Useful for Medical Image Classification? by Huix, Joana Pales, Ganeshan, Adithya Raju, Haslum, Johan Fredin, Soderberg, Magnus, Matsoukas, Christos, Smith, Kevin

    “…The deep learning field is converging towards the use of general foundation models that can be easily adapted for diverse tasks. While this paradigm shift has…”
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    Conference Proceeding
  4. 4

    What Makes Transfer Learning Work for Medical Images: Feature Reuse & Other Factors by Matsoukas, Christos, Haslum, Johan Fredin, Sorkhei, Moein, Soderberg, Magnus, Smith, Kevin

    “…Transfer learning is a standard technique to transfer knowledge from one domain to another. For applications in medical imaging, transfer from ImageNet has…”
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    Conference Proceeding
  5. 5

    Bridging Generalization Gaps in High Content Imaging Through Online Self-Supervised Domain Adaptation by Haslum, Johan Fredin, Matsoukas, Christos, Leuchowius, Karl-Johan, Smith, Kevin

    Published 21-11-2023
    “…High Content Imaging (HCI) plays a vital role in modern drug discovery and development pipelines, facilitating various stages from hit identification to…”
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    Journal Article
  6. 6

    Are Natural Domain Foundation Models Useful for Medical Image Classification? by Huix, Joana Palés, Ganeshan, Adithya Raju, Haslum, Johan Fredin, Söderberg, Magnus, Matsoukas, Christos, Smith, Kevin

    Published 30-10-2023
    “…The deep learning field is converging towards the use of general foundation models that can be easily adapted for diverse tasks. While this paradigm shift has…”
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    Journal Article
  7. 7

    Is it Time to Replace CNNs with Transformers for Medical Images? by Matsoukas, Christos, Haslum, Johan Fredin, Söderberg, Magnus, Smith, Kevin

    Published 20-08-2021
    “…Convolutional Neural Networks (CNNs) have reigned for a decade as the de facto approach to automated medical image diagnosis. Recently, vision transformers…”
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    Journal Article
  8. 8

    Metadata-guided Consistency Learning for High Content Images by Haslum, Johan Fredin, Matsoukas, Christos, Leuchowius, Karl-Johan, Müllers, Erik, Smith, Kevin

    Published 22-12-2022
    “…High content imaging assays can capture rich phenotypic response data for large sets of compound treatments, aiding in the characterization and discovery of…”
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    Journal Article
  9. 9

    What Makes Transfer Learning Work For Medical Images: Feature Reuse & Other Factors by Matsoukas, Christos, Haslum, Johan Fredin, Sorkhei, Moein, Söderberg, Magnus, Smith, Kevin

    Published 02-03-2022
    “…Transfer learning is a standard technique to transfer knowledge from one domain to another. For applications in medical imaging, transfer from ImageNet has…”
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    Journal Article
  10. 10

    Pretrained ViTs Yield Versatile Representations For Medical Images by Matsoukas, Christos, Haslum, Johan Fredin, Sorkhei, Moein, Söderberg, Magnus, Smith, Kevin

    Published 13-03-2023
    “…Convolutional Neural Networks (CNNs) have reigned for a decade as the de facto approach to automated medical image diagnosis, pushing the state-of-the-art in…”
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    Journal Article
  11. 11

    Adding Seemingly Uninformative Labels Helps in Low Data Regimes by Matsoukas, Christos, Hernandez, Albert Bou I, Liu, Yue, Dembrower, Karin, Miranda, Gisele, Konuk, Emir, Haslum, Johan Fredin, Zouzos, Athanasios, Lindholm, Peter, Strand, Fredrik, Smith, Kevin

    Published 20-07-2020
    “…Evidence suggests that networks trained on large datasets generalize well not solely because of the numerous training examples, but also class diversity which…”
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    Journal Article