Search Results - "Haslum, Johan Fredin"
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Cell Painting-based bioactivity prediction boosts high-throughput screening hit-rates and compound diversity
Published in Nature communications (24-04-2024)“…Identifying active compounds for a target is a time- and resource-intensive task in early drug discovery. Accurate bioactivity prediction using morphological…”
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Journal Article -
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Bridging Generalization Gaps in High Content Imaging Through Online Self-Supervised Domain Adaptation
Published in 2024 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV) (03-01-2024)“…High Content Imaging (HCI) plays a vital role in modern drug discovery and development pipelines, facilitating various stages from hit identification to…”
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Conference Proceeding -
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Are Natural Domain Foundation Models Useful for Medical Image Classification?
Published in 2024 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV) (03-01-2024)“…The deep learning field is converging towards the use of general foundation models that can be easily adapted for diverse tasks. While this paradigm shift has…”
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Conference Proceeding -
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What Makes Transfer Learning Work for Medical Images: Feature Reuse & Other Factors
Published in 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) (01-06-2022)“…Transfer learning is a standard technique to transfer knowledge from one domain to another. For applications in medical imaging, transfer from ImageNet has…”
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Conference Proceeding -
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Bridging Generalization Gaps in High Content Imaging Through Online Self-Supervised Domain Adaptation
Published 21-11-2023“…High Content Imaging (HCI) plays a vital role in modern drug discovery and development pipelines, facilitating various stages from hit identification to…”
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Journal Article -
6
Are Natural Domain Foundation Models Useful for Medical Image Classification?
Published 30-10-2023“…The deep learning field is converging towards the use of general foundation models that can be easily adapted for diverse tasks. While this paradigm shift has…”
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Journal Article -
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Is it Time to Replace CNNs with Transformers for Medical Images?
Published 20-08-2021“…Convolutional Neural Networks (CNNs) have reigned for a decade as the de facto approach to automated medical image diagnosis. Recently, vision transformers…”
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Metadata-guided Consistency Learning for High Content Images
Published 22-12-2022“…High content imaging assays can capture rich phenotypic response data for large sets of compound treatments, aiding in the characterization and discovery of…”
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Journal Article -
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What Makes Transfer Learning Work For Medical Images: Feature Reuse & Other Factors
Published 02-03-2022“…Transfer learning is a standard technique to transfer knowledge from one domain to another. For applications in medical imaging, transfer from ImageNet has…”
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Journal Article -
10
Pretrained ViTs Yield Versatile Representations For Medical Images
Published 13-03-2023“…Convolutional Neural Networks (CNNs) have reigned for a decade as the de facto approach to automated medical image diagnosis, pushing the state-of-the-art in…”
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Adding Seemingly Uninformative Labels Helps in Low Data Regimes
Published 20-07-2020“…Evidence suggests that networks trained on large datasets generalize well not solely because of the numerous training examples, but also class diversity which…”
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Journal Article