Search Results - "Hartono, Yossa"
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Biosynthesis of Nature-Inspired Unnatural Cannabinoids
Published in Molecules (Basel, Switzerland) (14-05-2021)“…Natural products make up a large proportion of medicine available today. Cannabinoids from the plant is one unique class of meroterpenoids that have shown a…”
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Effects of Rho-Associated Kinase (Rock) Inhibitors (Alternative to Y-27632) on Primary Human Corneal Endothelial Cells
Published in Cells (Basel, Switzerland) (03-05-2023)“…(1) Rho-associated coiled-coil protein kinase (ROCK) signaling cascade impacts a wide array of cellular events. For cellular therapeutics, scalable expansion…”
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3
Cannabinoid Biosynthesis Using Noncanonical Cannabinoid Synthases
Published in International journal of molecular sciences (09-01-2023)“…We report enzymes from the berberine bridge enzyme (BBE) superfamily that catalyze the oxidative cyclization of the monoterpene moiety in cannabigerolic acid…”
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4
Computational study of bindings of HK20 Fab and D5 Fab to HIV-1 gp41
Published in Bioorganic & medicinal chemistry letters (15-02-2012)“…Antibodies HK20 and D5 have been shown to target HIV-1 gp41, thereby inhibiting membrane fusion that facilitates viral entry. The binding picture is static,…”
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Recent Advances in Structure, Function, and Pharmacology of Class A Lipid GPCRs: Opportunities and Challenges for Drug Discovery
Published in Pharmaceuticals (Basel, Switzerland) (22-12-2021)“…Great progress has been made over the past decade in understanding the structural, functional, and pharmacological diversity of lipid GPCRs. From the first…”
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Computational study of bindings of HL9, a nonapeptide fragment of human lysozyme, to HIV-1 fusion protein gp41
Published in Bioorganic & medicinal chemistry letters (15-03-2011)“…HL9 is a nonapeptide fragment of human lysozyme which has been shown to have anti-HIV-1 activity in nanomolar concentration. This study aims to explain this…”
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Role of Pseudoisocytidine Tautomerization in Triplex-Forming Oligonucleotides: In Silico and in Vitro Studies
Published in ACS omega (31-05-2017)“…Pseudoisocytidine (ΨC) is a synthetic cytidine analogue that can target DNA duplex to form parallel triplex at neutral pH. Pseudoisocytidine has mainly two…”
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Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production
Published in ACS catalysis (15-04-2022)“…Synthetic biology efforts for cannabinoid research have seen a rapid expansion in recent years. This is in response to the increasing awareness and…”
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Computational Study of Uracil Tautomeric Forms in the Ribosome: The Case of Uracil and 5‑Oxyacetic Acid Uracil in the First Anticodon Position of tRNA
Published in The journal of physical chemistry. B (25-01-2018)“…Tautomerism is important in many biomolecular interactions, not least in RNA biology. Crystallographic studies show the possible presence of minor tautomer…”
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10
Modeling pK Shift in DNA Triplexes Containing Locked Nucleic Acids
Published in Journal of chemical information and modeling (23-04-2018)“…The protonation states for nucleic acid bases are difficult to assess experimentally. In the context of DNA triplex, the protonation state of cytidine in the…”
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11
Modeling p K Shift in DNA Triplexes Containing Locked Nucleic Acids
Published in Journal of chemical information and modeling (23-04-2018)“…The protonation states for nucleic acid bases are difficult to assess experimentally. In the context of DNA triplex, the protonation state of cytidine in the…”
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Journal Article -
12
Adsorption and folding dynamics of MPER of HIV-1 gp41 in the presence of dpc micelle
Published in Proteins, structure, function, and bioinformatics (01-06-2013)“…Membrane‐proximal ectodomain region (MPER) of HIV‐1 gp41 is known to have several epitopes of monoclonal antibodies. It also plays an important role in the…”
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13
Effects of Rho-Associated Kinase on Primary Human Corneal Endothelial Cells
Published in Cells (Basel, Switzerland) (01-05-2023)“…(1) Rho-associated coiled-coil protein kinase (ROCK) signaling cascade impacts a wide array of cellular events. For cellular therapeutics, scalable expansion…”
Get full text
Journal Article -
14
Understanding Structural Features of Biomolecular Interactions : from Classical Simulations to Ab Initio Calculations
Published 01-01-2017“…The structures of biomolecules and their interactions dictate their functions. In this thesis, five papers are presented to illustrate how the dynamics of…”
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Dissertation -
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Molecular dynamics studies of human receptor molecule in hemagglutinin of 1918 and 2009 H1N1 influenza viruses
Published in Journal of molecular modeling (01-07-2011)“…Molecular dynamics (MD) simulations were carried out to study the behavior of human receptor molecule in the hemagglutinin (HA) of 1918 and 2009 H1N1 influenza…”
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