Search Results - "Hansen, Thomas Arn"

Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing by Mollerup, Sarah, Friis-Nielsen, Jens, Vinner, Lasse, Hansen, Thomas Arn, Richter, Stine Raith, Fridholm, Helena, Herrera, Jose Alejandro Romero, Lund, Ole, Brunak, Søren, Izarzugaza, Jose M G, Mourier, Tobias, Nielsen, Lars Peter, Hansen, Anders Johannes

“…Propionibacterium acnesis the most abundant bacterium on human skin, particularly in sebaceous areas.P. acnesis suggested to be an opportunistic pathogen…”
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Target-dependent enrichment of virions determines the reduction of high-throughput sequencing in virus discovery by Jensen, Randi Holm, Mollerup, Sarah, Mourier, Tobias, Hansen, Thomas Arn, Fridholm, Helena, Nielsen, Lars Peter, Willerslev, Eske, Hansen, Anders Johannes, Vinner, Lasse

“…Viral infections cause many different diseases stemming both from well-characterized viral pathogens but also from emerging viruses, and the search for novel…”
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New Type of Papillomavirus and Novel Circular Single Stranded DNA Virus Discovered in Urban Rattus norvegicus Using Circular DNA Enrichment and Metagenomics by Hansen, Thomas Arn, Fridholm, Helena, Frøslev, Tobias Guldberg, Kjartansdóttir, Kristín Rós, Willerslev, Eske, Nielsen, Lars Peter, Hansen, Anders Johannes

“…Rattus norvegicus (R. norvegicus) are ubiquitous and their presence has several effects on the human populations in our urban areas on a global scale. Both…”
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Traces of ATCV-1 associated with laboratory component contamination by Kjartansdóttir, Kristín Rós, Friis-Nielsen, Jens, Asplund, Maria, Mollerup, Sarah, Mourier, Tobias, Jensen, Randi Holm, Hansen, Thomas Arn, Rey-Iglesia, Alba, Richter, Stine Raith, Alquezar-Planas, David E., Olsen, Pernille V. S., Vinner, Lasse, Fridholm, Helena, Sicheritz-Pontén, Thomas, Nielsen, Lars Peter, Brunak, Søren, Willerslev, Eske, Izarzugaza, Jose M. G., Hansen, Anders Johannes

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Increased Bacterial Richness Associated With Lesions Within the Porites spp. of Vietnam by Rasmussen, Linett, Barnes, Christopher, Mak, Sarah Siu Tze, Kjartansdóttir, Kristín Rós, Hansen, Thomas Arn, Doan-Nhu, Hai, Nguyen-Ngoc, Lam, Guldberg Frøslev, Tobias, Hellström, Micaela, Hansen, Anders Johannes

“…Coral reefs worldwide are rapidly declining due to increasing anthropogenic stressors and environmental changes, with large-scale mortalities of coral reefs…”
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High diversity of picornaviruses in rats from different continents revealed by deep sequencing by Hansen, Thomas Arn, Mollerup, Sarah, Nguyen, Nam-Phuong, White, Nicole E, Coghlan, Megan, Alquezar-Planas, David E, Joshi, Tejal, Jensen, Randi Holm, Fridholm, Helena, Kjartansdóttir, Kristín Rós, Mourier, Tobias, Warnow, Tandy, Belsham, Graham J, Bunce, Michael, Willerslev, Eske, Nielsen, Lars Peter, Vinner, Lasse, Hansen, Anders Johannes

“…Outbreaks of zoonotic diseases in humans and livestock are not uncommon, and an important component in containment of such emerging viral diseases is rapid and…”
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Screening patients at admission to Copenhagen hospitals for carriage of resistant bacteria after contact with healthcare systems abroad, 2016–2019 by Westerholt, Marc, Hasman, Henrik, Hansen, Dennis Schrøder, Roer, Louise, Hansen, Thomas Arn, Petersen, Andreas, Holzknecht, Barbara Juliane

“…•Total carrier prevalence for MRSA, VRE and CPO after hospitalisation abroad was 3.6%•Southern and Western Asia were overrepresented travel…”
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Emergence of a vancomycin-variable Enterococcus faecium ST1421 strain containing a deletion in vanX by Hansen, Thomas Arn, Pedersen, Martin Schou, Nielsen, Lone Gilmor, Ma, Chih Man German, Søes, Lillian Marie, Worning, Peder, Østergaard, Christian, Westh, Henrik, Pinholt, Mette, Schønning, Kristian

“…Primary screening for VRE with PCR directed against vanA allowed identification of vanA+ samples from which VRE could not be isolated when selective culture…”
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Metagenomic Analysis Reveals Previously Undescribed Bat Coronavirus Strains in Eswatini by Shapiro, Julie Teresa, Mollerup, Sarah, Jensen, Randi Holm, Olofsson, Jill Katharina, Nguyen, Nam-phuong D., Hansen, Thomas Arn, Vinner, Lasse, Monadjem, Ara, McCleery, Robert A., Hansen, Anders J.

“…We investigated the prevalence of coronaviruses in 44 bats from four families in northeastern Eswatini using high-throughput sequencing of fecal samples. We…”
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Characterizing novel endogenous retroviruses from genetic variation inferred from short sequence reads by Mourier, Tobias, Mollerup, Sarah, Vinner, Lasse, Hansen, Thomas Arn, Kjartansdóttir, Kristín Rós, Guldberg Frøslev, Tobias, Snogdal Boutrup, Torsten, Nielsen, Lars Peter, Willerslev, Eske, Hansen, Anders J.

“…From Illumina sequencing of DNA from brain and liver tissue from the lion, Panthera leo and tumor samples from the pike-perch, Sander lucioperca , we obtained…”
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Vancomycin gene selection in the microbiome of urban Rattus norvegicus from hospital environment by Hansen, Thomas Arn, Joshi, Tejal, Larsen, Anders Rhod, Andersen, Paal Skytt, Harms, Klaus, Mollerup, Sarah, Willerslev, Eske, Fuursted, Kurt, Nielsen, Lars Peter, Hansen, Anders Johannes

“…Widespread use of antibiotics has resulted in selection pressure on genes that make bacteria non-responsive to antibiotics. These antibiotic-resistant bacteria…”
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Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers by Friis-Nielsen, Jens, Kjartansdóttir, Kristín Rós, Mollerup, Sarah, Asplund, Maria, Mourier, Tobias, Jensen, Randi Holm, Hansen, Thomas Arn, Rey-Iglesia, Alba, Richter, Stine Raith, Nielsen, Ida Broman, Alquezar-Planas, David E, Olsen, Pernille V S, Vinner, Lasse, Fridholm, Helena, Nielsen, Lars Peter, Willerslev, Eske, Sicheritz-Pontén, Thomas, Lund, Ole, Hansen, Anders Johannes, Izarzugaza, Jose M G, Brunak, Søren

“…Virus discovery from high throughput sequencing data often follows a bottom-up approach where taxonomic annotation takes place prior to association to disease…”
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New Type of Papillomavirus and Novel Circular Single Stranded DNA Virus Discovered in Urban Rattus norvegicus Using Circular DNA Enrichment and Metagenomics: e0141952 by Hansen, Thomas Arn, Fridholm, Helena, Froeslev, Tobias Guldberg, Kjartansdottir, Kristin Ros, Willerslev, Eske, Nielsen, Lars Peter, Hansen, Anders Johannes

“…Rattus norvegicus (R. norvegicus) are ubiquitous and their presence has several effects on the human populations in our urban areas on a global scale. Both…”
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Target-Dependent Enrichment of Virions Determines the Reduction of High-Throughput Sequencing in Virus Discovery: e0122636 by Jensen, Randi Holm, Mollerup, Sarah, Mourier, Tobias, Hansen, Thomas Arn, Fridholm, Helena, Nielsen, Lars Peter, Willerslev, Eske, Hansen, Anders Johannes, Vinner, Lasse

“…Viral infections cause many different diseases stemming both from well-characterized viral pathogens but also from emerging viruses, and the search for novel…”
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