Search Results - "Hallin, Johan"

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  1. 1

    Contrasting evolutionary genome dynamics between domesticated and wild yeasts by Yue, Jia-Xing, Li, Jing, Aigrain, Louise, Hallin, Johan, Persson, Karl, Oliver, Karen, Bergström, Anders, Coupland, Paul, Warringer, Jonas, Lagomarsino, Marco Cosentino, Fischer, Gilles, Durbin, Richard, Liti, Gianni

    Published in Nature genetics (01-06-2017)
    “…Jia-Xing Yue, Gianni Liti and colleagues use long-read sequencing to generate complete genome assemblies of 7 Saccharomyces cerevisiae and 5 Saccharomyces…”
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  2. 2

    Regulation plays a multifaceted role in the retention of gene duplicates by Hallin, Johan, Landry, Christian R

    Published in PLoS biology (22-11-2019)
    “…A gene duplication can lead to all sorts of problems in a cell. However, it can also lead to all sorts of benefits. Beneficial or not, the gene duplicates…”
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  3. 3

    Predicting quantitative traits from genome and phenome with near perfect accuracy by Märtens, Kaspar, Hallin, Johan, Warringer, Jonas, Liti, Gianni, Parts, Leopold

    Published in Nature communications (10-05-2016)
    “…In spite of decades of linkage and association studies and its potential impact on human health, reliable prediction of an individual’s risk for heritable…”
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  4. 4
  5. 5

    Clonal Heterogeneity Influences the Fate of New Adaptive Mutations by Vázquez-García, Ignacio, Salinas, Francisco, Li, Jing, Fischer, Andrej, Barré, Benjamin, Hallin, Johan, Bergström, Anders, Alonso-Perez, Elisa, Warringer, Jonas, Mustonen, Ville, Liti, Gianni

    Published in Cell reports (Cambridge) (17-10-2017)
    “…The joint contribution of pre-existing and de novo genetic variation to clonal adaptation is poorly understood but essential to designing successful…”
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  6. 6

    Powerful decomposition of complex traits in a diploid model by Hallin, Johan, Märtens, Kaspar, Young, Alexander I., Zackrisson, Martin, Salinas, Francisco, Parts, Leopold, Warringer, Jonas, Liti, Gianni

    Published in Nature communications (02-11-2016)
    “…Explaining trait differences between individuals is a core and challenging aim of life sciences. Here, we introduce a powerful framework for complete…”
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  7. 7

    Scan-o-matic: High-Resolution Microbial Phenomics at a Massive Scale by Zackrisson, Martin, Hallin, Johan, Ottosson, Lars-Göran, Dahl, Peter, Fernandez-Parada, Esteban, Ländström, Erik, Fernandez-Ricaud, Luciano, Kaferle, Petra, Skyman, Andreas, Stenberg, Simon, Omholt, Stig, Petrovič, Uroš, Warringer, Jonas, Blomberg, Anders

    Published in G3 : genes - genomes - genetics (01-09-2016)
    “…The capacity to map traits over large cohorts of individuals-phenomics-lags far behind the explosive development in genomics. For microbes, the estimation of…”
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  8. 8

    Testing the Genomic Shock Hypothesis Using Transposable Element Expression in Yeast Hybrids by Drouin, Marika, Hénault, Mathieu, Hallin, Johan, Landry, Christian R.

    Published in Frontiers in fungal biology (23-08-2021)
    “…Transposable element (TE) insertions are a source of structural variation and can cause genetic instability and gene expression changes. A host can limit the…”
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  9. 9

    Similarities in biological processes can be used to bridge ecology and molecular biology by Hallin, Johan, Cisneros, Angel F., Hénault, Mathieu, Fijarczyk, Anna, Dandage, Rohan, Bautista, Carla, Landry, Christian R.

    Published in Evolutionary applications (01-07-2020)
    “…Much of the research in biology aims to understand the origin of diversity. Naturally, ecological diversity was the first object of study, but we now have the…”
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  10. 10

    Turnover of ribosome-associated transcripts from de novo ORFs produces gene-like characteristics available for de novo gene emergence in wild yeast populations by Durand, Éléonore, Gagnon-Arsenault, Isabelle, Hallin, Johan, Hatin, Isabelle, Dubé, Alexandre K, Nielly-Thibault, Lou, Namy, Olivier, Landry, Christian R

    Published in Genome research (01-06-2019)
    “…Little is known about the rate of emergence of de novo genes, what their initial properties are, and how they spread in populations. We examined wild yeast…”
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  11. 11

    Intragenic repeat expansion in the cell wall protein gene HPF1 controls yeast chronological aging by Barré, Benjamin P, Hallin, Johan, Yue, Jia-Xing, Persson, Karl, Mikhalev, Ekaterina, Irizar, Agurtzane, Holt, Sylvester, Thompson, Dawn, Molin, Mikael, Warringer, Jonas, Liti, Gianni

    Published in Genome research (01-05-2020)
    “…Aging varies among individuals due to both genetics and environment, but the underlying molecular mechanisms remain largely unknown. Using a highly recombined…”
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  12. 12

    A single-nucleotide change underlies the genetic assimilation of a plastic trait by Vigne, Paul, Gimond, Clotilde, Ferrari, Céline, Vielle, Anne, Hallin, Johan, Pino-Querido, Ania, El Mouridi, Sonia, Mignerot, Laure, Frøkjær-Jensen, Christian, Boulin, Thomas, Teotónio, Henrique, Braendle, Christian

    Published in Science advances (03-02-2021)
    “…Genetic assimilation-the evolutionary process by which an environmentally induced phenotype is made constitutive-represents a fundamental concept in…”
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