Search Results - "HARVEY, H. Rodger"
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Novel lineages of Prochlorococcus and Synechococcus in the global oceans
Published in The ISME Journal (01-02-2012)“…Picocyanobacteria represented by Prochlorococcus and Synechococcus have an important role in oceanic carbon fixation and nutrient cycling. In this study, we…”
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Metaproteomics reveal that rapid perturbations in organic matter prioritize functional restructuring over taxonomy in western Arctic Ocean microbiomes
Published in The ISME Journal (01-01-2020)“…We examined metaproteome profiles from two Arctic microbiomes during 10-day shipboard incubations to directly track early functional and taxonomic responses to…”
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The sequestration of terrestrial organic carbon in Arctic Ocean sediments: A comparison of methods and implications for regional carbon budgets
Published in Geochimica et cosmochimica acta (15-10-2009)“…A variety of approaches have previously been developed to estimate the fraction of terrestrial or marine organic carbon present in aquatic sediments. The task…”
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Diatom proteomics reveals unique acclimation strategies to mitigate Fe limitation
Published in PloS one (16-10-2013)“…Phytoplankton growth rates are limited by the supply of iron (Fe) in approximately one third of the open ocean, with major implications for carbon dioxide…”
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Modeling silicate–nitrate–ammonium co-limitation of algal growth and the importance of bacterial remineralization based on an experimental Arctic coastal spring bloom culture study
Published in Biogeosciences (11-03-2021)“…Arctic coastal ecosystems are rapidly changing due to climate warming. This makes modeling their productivity crucially important to better understand future…”
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Black Carbon in Estuarine and Coastal Ocean Dissolved Organic Matter
Published in Limnology and oceanography (01-05-2004)“…We measured black carbon (BC) in ultrafiltered, high-molecular weight dissolved organic matter (UDOM) in surface waters of Delaware Bay, Chesapeake Bay, and…”
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Interannual summer variability in euphausiid populations on the eastern Bering Sea shelf during the recent cooling event (2008–2010)
Published in Deep-sea research. Part I, Oceanographic research papers (01-01-2015)“…The recent cooling in the eastern Bering Sea resulted in a series of cold years (2008–2010) marked by extensive ice coverage and late ice retreat. In the…”
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MS analysis of a dilution series of bacteria:phytoplankton to improve detection of low abundance bacterial peptides
Published in Scientific reports (18-06-2018)“…Assigning links between microbial activity and biogeochemical cycles in the ocean is a primary objective for ecologists and oceanographers. Bacteria represent…”
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Bacterial hopanoids as tracers of organic carbon sources and processing across the western Arctic continental shelf
Published in Organic geochemistry (01-06-2011)“…Tracing the inputs of bacterial organic carbon to marine systems has been constrained by the lack of distinguishing geochemical tracers and limited…”
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Growth phase proteomics of the heterotrophic marine bacterium Ruegeria pomeroyi
Published in Scientific data (03-12-2019)“…The heterotrophic marine bacterium, Ruegeria pomeroyi , was experimentally cultured under environmentally realistic carbon conditions and with a tracer-level…”
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Organic sources and carbon sequestration in Holocene shelf sediments from the western Arctic Ocean
Published in Continental shelf research (01-08-2011)“…To quantify changes in organic carbon inputs and preservation, sediments from the Northern Chukchi Sea spanning the last 9000 years of the Holocene period were…”
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Distribution and source assignments of polycyclic aromatic and aliphatic hydrocarbons in sediments and biota of the Lafayette River, VA
Published in Environmental science and pollution research international (01-04-2023)“…The Lafayette River comprises a tidal sub-estuary constrained by an urban watershed that is bounded by residential areas at its upper reaches and port activity…”
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The path to preservation: Using proteomics to decipher the fate of diatom proteins during microbial degradation
Published in Limnology and oceanography (01-07-2010)“…We drew upon recent advances in tandem mass spectrometry-based proteomic analyses in order to examine the proteins that remain after a diatom bloom enters the…”
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The response of microbial communities to diverse organic matter sources in the Arctic Ocean
Published in Deep-sea research. Part II, Topical studies in oceanography (01-08-2009)“…The response of Arctic microbial communities to a variety of natural organic matter substrates, including peat, ice algae and ice-rafted debris was examined…”
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Individual variability in sub-Arctic krill material properties, lipid composition, and other scattering model inputs affect acoustic estimates of their population
Published in ICES journal of marine science (01-08-2021)“…Abstract Target strength model inputs including morphometry, material properties, lipid composition, and in situ orientations were measured for sub-Arctic…”
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Kinetics of phytoplankton decay during simulated sedimentation: Changes in biochemical composition and microbial activity under oxic and anoxic conditions
Published in Geochimica et cosmochimica acta (01-08-1995)“…A series of oxic and anoxic incubations examined the decay of two marine phytoplankton, the diatom Thalassiosira weissffogii and the coccoid cyanobacterium…”
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Detrital neodymium and (radio)carbon as complementary sedimentary bedfellows? The Western Arctic Ocean as a testbed
Published in Geochimica et cosmochimica acta (15-12-2021)“…Interactions between organic and detrital mineral phases strongly influence both the dispersal and accumulation of terrestrial organic carbon (OC) in…”
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An Alignment-Free “Metapeptide” Strategy for Metaproteomic Characterization of Microbiome Samples Using Shotgun Metagenomic Sequencing
Published in Journal of proteome research (05-08-2016)“…In principle, tandem mass spectrometry can be used to detect and quantify the peptides present in a microbiome sample, enabling functional and taxonomic…”
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An introduction to the Bering Sea Project: Volume II
Published in Deep-sea research. Part II, Topical studies in oceanography (01-10-2013)Get full text
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Identifying and tracking proteins through the marine water column: Insights into the inputs and preservation mechanisms of protein in sediments
Published in Geochimica et cosmochimica acta (15-04-2012)“…Proteins generated during primary production represent an important fraction of marine organic nitrogen and carbon, and have the potential to provide…”
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