Search Results - "HAN, Cliff"

Prebiotic supplements correct oral probiotic deficiency for lasting allergy relief by Shunsheng Han, Cliff

“…The prevalence of allergic rhinitis (common allergies) has increased in the last fifty years, from less than one percent to more than twenty-six percent of the…”
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MicroRNAs suppress NB domain genes in tomato that confer resistance to Fusarium oxysporum by Ouyang, Shouqiang, Park, Gyungsoon, Atamian, Hagop S, Han, Cliff S, Stajich, Jason E, Kaloshian, Isgouhi, Borkovich, Katherine A

“…MicroRNAs (miRNAs) suppress the transcriptional and post-transcriptional expression of genes in plants. Several miRNA families target genes encoding…”
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Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae by Chun, Jongsik, Grim, Christopher J, Hasan, Nur A, Lee, Je Hee, Choi, Seon Young, Haley, Bradd J, Taviani, Elisa, Jeon, Yoon-Seong, Kim, Dong Wook, Lee, Jae-Hak, Brettin, Thomas S, Bruce, David C, Challacombe, Jean F, Detter, J. Chris, Han, Cliff S, Munk, A. Christine, Chertkov, Olga, Meincke, Linda, Saunders, Elizabeth, Walters, Ronald A, Huq, Anwar, Nair, G. Balakrish, Colwell, Rita R

“…Vibrio cholerae, the causative agent of cholera, is a bacterium autochthonous to the aquatic environment, and a serious public health threat. V. cholerae…”
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Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing by Fischer, Will, Ganusov, Vitaly V, Giorgi, Elena E, Hraber, Peter T, Keele, Brandon F, Leitner, Thomas, Han, Cliff S, Gleasner, Cheryl D, Green, Lance, Lo, Chien-Chi, Nag, Ambarish, Wallstrom, Timothy C, Wang, Shuyi, McMichael, Andrew J, Haynes, Barton F, Hahn, Beatrice H, Perelson, Alan S, Borrow, Persephone, Shaw, George M, Bhattacharya, Tanmoy, Korber, Bette T

“…We used ultra-deep sequencing to obtain tens of thousands of HIV-1 sequences from regions targeted by CD8+ T lymphocytes from longitudinal samples from three…”
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genomic basis of trophic strategy in marine bacteria by Lauro, Federico M, McDougald, Diane, Thomas, Torsten, Williams, Timothy J, Egan, Suhelen, Rice, Scott, DeMaere, Matthew Z, Ting, Lily, Ertan, Haluk, Johnson, Justin, Ferriera, Steven, Lapidus, Alla, Anderson, Iain, Kyrpides, Nikos, Munk, A. Christine, Detter, Chris, Han, Cliff S, Brown, Mark V, Robb, Frank T, Kjelleberg, Staffan, Cavicchioli, Ricardo

“…Many marine bacteria have evolved to grow optimally at either high (copiotrophic) or low (oligotrophic) nutrient concentrations, enabling different species to…”
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A Specific Hygiene Hypothesis by Shunsheng Han, Cliff

“…Abstract Allergic diseases have reached epidemic proportions in Western populations in the last several decades. The hygiene hypothesis proposed more than…”
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Assembling the marine metagenome, one cell at a time by Woyke, Tanja, Xie, Gary, Copeland, Alex, González, José M, Han, Cliff, Kiss, Hajnalka, Saw, Jimmy H, Senin, Pavel, Yang, Chi, Chatterji, Sourav, Cheng, Jan-Fang, Eisen, Jonathan A, Sieracki, Michael E, Stepanauskas, Ramunas

“…The difficulty associated with the cultivation of most microorganisms and the complexity of natural microbial assemblages, such as marine plankton or human…”
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Complete genome sequence of the filamentous anoxygenic phototrophic bacterium Chloroflexus aurantiacus by Tang, Kuo-Hsiang, Barry, Kerrie, Chertkov, Olga, Dalin, Eileen, Han, Cliff S, Hauser, Loren J, Honchak, Barbara M, Karbach, Lauren E, Land, Miriam L, Lapidus, Alla, Larimer, Frank W, Mikhailova, Natalia, Pitluck, Samuel, Pierson, Beverly K, Blankenship, Robert E

“…Chloroflexus aurantiacus is a thermophilic filamentous anoxygenic phototrophic (FAP) bacterium, and can grow phototrophically under anaerobic conditions or…”
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A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea by Eisen, Jonathan A, Wu, Dongying, Hugenholtz, Philip, Mavromatis, Konstantinos, Pukall, Rüdiger, Dalin, Eileen, Ivanova, Natalia N, Kunin, Victor, Goodwin, Lynne, Wu, Martin, Tindall, Brian J, Hooper, Sean D, Pati, Amrita, Lykidis, Athanasios, Spring, Stefan, Anderson, Iain J, D'haeseleer, Patrik, Zemla, Adam, Singer, Mitchell, Lapidus, Alla, Nolan, Matt, Copeland, Alex, Han, Cliff, Chen, Feng, Cheng, Jan-Fang, Lucas, Susan, Kerfeld, Cheryl, Lang, Elke, Gronow, Sabine, Chain, Patrick, Bruce, David, Rubin, Edward M, Kyrpides, Nikos C, Klenk, Hans-Peter

“…Sequencing of bacterial and archaeal genomes has revolutionized our understanding of the many roles played by microorganisms. There are now nearly 1,000…”
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Mechanism of induction and suppression of antiviral immunity directed by virus-derived small RNAs in Drosophila by Aliyari, Roghiyh, Wu, Qingfa, Li, Hong-Wei, Wang, Xiao-Hong, Li, Feng, Green, Lance D, Han, Cliff S, Li, Wan-Xiang, Ding, Shou-Wei

“…The small RNA-directed viral immunity pathway in plants and invertebrates begins with the production by Dicer nuclease of virus-derived siRNAs (viRNAs), which…”
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complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum) by Pierce, Elizabeth, Xie, Gary, Barabote, Ravi D, Saunders, Elizabeth, Han, Cliff S, Detter, John C, Richardson, Paul, Brettin, Thomas S, Das, Amaresh, Ljungdahl, Lars G, Ragsdale, Stephen W

“…This paper describes the genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum), which is the model acetogenic bacterium that has been…”
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Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species by Hasan, Nur A, Grim, Christopher J, Lipp, Erin K, Rivera, Irma N G, Chun, Jongsik, Haley, Bradd J, Taviani, Elisa, Choi, Seon Young, Hoq, Mozammel, Munk, A Christine, Brettin, Thomas S, Bruce, David, Challacombe, Jean F, Detter, J Chris, Han, Cliff S, Eisen, Jonathan A, Huq, Anwar, Colwell, Rita R

“…Vibrio species are both ubiquitous and abundant in marine coastal waters, estuaries, ocean sediment, and aquaculture settings worldwide. We report here the…”
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Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7 by SUEN, Garret, STEVENSON, David M, HAUSER, Loren J, IVANOVA, Natalia N, KYRPIDES, Nikos C, LAND, Miriam L, LAPIDUS, Alla, LUCAS, Susan, OVCHINNIKOVA, Galina, PITLUCK, Sam, TAPIA, Roxanne, WOYKE, Tanja, BRUCE, David C, BOYUM, Julie, MEAD, David, WEIMER, Paul J, CHERTKOV, Olga, COPELAND, Alex, CHENG, Jan-Feng, DETTER, Chris, DETTER, John C, GOODWIN, Lynne A, HAN, Cliff S

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments by Aklujkar, Muktak, Young, Nelson D, Holmes, Dawn, Chavan, Milind, Risso, Carla, Kiss, Hajnalka E, Han, Cliff S, Land, Miriam L, Lovley, Derek R

“…Geobacter species in a phylogenetic cluster known as subsurface clade 1 are often the predominant microorganisms in subsurface environments in which Fe(III)…”
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Improved lysis of single bacterial cells by a modified alkaline-thermal shock procedure by He, Jian, Du, Shiyu, Tan, Xiaohua, Arefin, Ayesha, Han, Cliff S

“…Single-cell genomics (SCG) is a recently developed tool to study the genomes of unculturable bacterial species. SCG relies on multiple-strand displacement…”
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The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production by Sieber, Jessica R., Sims, David R., Han, Cliff, Kim, Edwin, Lykidis, Athanasios, Lapidus, Alla L., McDonnald, Erin, Rohlin, Lars, Culley, David E., Gunsalus, Robert, McInerney, Michael J.

“…Summary Syntrophomonas wolfei is a specialist, evolutionarily adapted for syntrophic growth with methanogens and other hydrogen‐ and/or formate‐using…”
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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96 by Svenning, Mette M, Hestnes, Anne Grethe, Wartiainen, Ingvild, Stein, Lisa Y, Klotz, Martin G, Kalyuzhnaya, Marina G, Spang, Anja, Bringel, Françoise, Vuilleumier, Stéphane, Lajus, Aurélie, Médigue, Claudine, Bruce, David C, Cheng, Jan-Fang, Goodwin, Lynne, Ivanova, Natalia, Han, James, Han, Cliff S, Hauser, Loren, Held, Brittany, Land, Miriam L, Lapidus, Alla, Lucas, Susan, Nolan, Matt, Pitluck, Sam, Woyke, Tanja

“…Methylobacter tundripaludum SV96T (ATCC BAA-1195) is a psychrotolerant aerobic methane-oxidizing gammaproteobacterium (Methylococcales, Methylococcaceae)…”
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The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features by Aklujkar, Muktak, Haveman, Shelley A, DiDonato, Jr, Raymond, Chertkov, Olga, Han, Cliff S, Land, Miriam L, Brown, Peter, Lovley, Derek R

“…The bacterium Pelobacter carbinolicus is able to grow by fermentation, syntrophic hydrogen/formate transfer, or electron transfer to sulfur from short-chain…”
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Genome of Polaromonas sp. Strain JS666: Insights into the Evolution of a Hydrocarbon- and Xenobiotic-Degrading Bacterium, and Features of Relevance to Biotechnology by Mattes, Timothy E, Alexander, Anne K, Richardson, Paul M, Munk, A. Christine, Han, Cliff S, Stothard, Paul, Coleman, Nicholas V

“…Polaromonas sp. strain JS666 can grow on cis-1,2-dichloroethene (cDCE) as a sole carbon and energy source and may be useful for bioremediation of chlorinated…”
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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae by GRIM, Christopher J, HASAN, Nur A, CHALLACOMBE, Jean, HUQ, Anwar, BALAKRISH NAIR, G, COLWELL, Rita R, TAVIANI, Elisa, HALEY, Bradd, CHUN, Jongsik, BRETTIN, Thomas S, BRUCE, David C, DETTER, J. Chris, HAN, Cliff S, CHERTKOV, Olga

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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