Search Results - "Guo, Xingli"

A network based method for analysis of lncRNA-disease associations and prediction of lncRNAs implicated in diseases by Yang, Xiaofei, Gao, Lin, Guo, Xingli, Shi, Xinghua, Wu, Hao, Song, Fei, Wang, Bingbo

“…Increasing evidence has indicated that long non-coding RNAs (lncRNAs) are implicated in and associated with many complex human diseases. Despite of the…”
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HPOSim: an R package for phenotypic similarity measure and enrichment analysis based on the human phenotype ontology by Deng, Yue, Gao, Lin, Wang, Bingbo, Guo, Xingli

“…Phenotypic features associated with genes and diseases play an important role in disease-related studies and most of the available methods focus solely on the…”
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Cluster correlation based method for lncRNA-disease association prediction by Yuan, Qianqian, Guo, Xingli, Ren, Yang, Wen, Xiao, Gao, Lin

“…In recent years, increasing evidences have indicated that long non-coding RNAs (lncRNAs) are deeply involved in a wide range of human biological pathways. The…”
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DeepCBS: shedding light on the impact of mutations occurring at CTCF binding sites by Wang, Yiheng, Guo, Xingli, Niu, Zhixin, Huang, Xiaotai, Wang, Bingbo, Gao, Lin

“…CTCF-mediated chromatin loops create insulated neighborhoods that constrain promoter-enhancer interactions, serving as a unit of gene regulation. Disruption of…”
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C3: connect separate connected components to form a succinct disease module by Wang, Bingbo, Hu, Jie, Wang, Yajun, Zhang, Chenxing, Zhou, Yuanjun, Yu, Liang, Guo, Xingli, Gao, Lin, Chen, Yunru

“…Abstract Background Precise disease module is conducive to understanding the molecular mechanism of disease causation and identifying drug targets. However,…”
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Extracting Stage-Specific and Dynamic Modules Through Analyzing Multiple Networks Associated with Cancer Progression by Ma, Xiaoke, Tang, Wanxin, Wang, Peizhuo, Guo, Xingli, Gao, Lin

“…Determining the dynamics of pathways associated with cancer progression is critical for understanding the etiology of diseases. Advances in biological…”
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Vehicle kinematic and dynamic modeling for three-axles heavy duty vehicle by Li, Yongming, Ma, Shou, Yu, Kunting, Guo, Xingli

“…Under complex conditions, the vertical, lateral and longitudinal dynamics of vehicles have obvious coupling and interaction. This paper aims to provide a…”
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Diversified Control Paths: A Significant Way Disease Genes Perturb the Human Regulatory Network by Wang, Bingbo, Gao, Lin, Zhang, Qingfang, Li, Aimin, Deng, Yue, Guo, Xingli

“…The complexity of biological systems motivates us to use the underlying networks to provide deep understanding of disease etiology and the human diseases are…”
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CBP-JMF: An Improved Joint Matrix Tri-Factorization Method for Characterizing Complex Biological Processes of Diseases by Wang, Bingbo, Ma, Xiujuan, Xie, Minghui, Wu, Yue, Wang, Yajun, Duan, Ran, Zhang, Chenxing, Yu, Liang, Guo, Xingli, Gao, Lin

“…Multi-omics molecules regulate complex biological processes (CBPs), which reflect the activities of various molecules in living organisms. Meanwhile, the…”
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Integrating phenotypic features and tissue-specific information to prioritize disease genes by Deng, Yue, Gao, Lin, Guo, Xingli, Wang, Bingbo

“…Prioritization of candidate disease genes is crucial for improving medical care, and is one of the fundamental challenges in the post-genomic era. In recent…”
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A computational method based on the integration of heterogeneous networks for predicting disease-gene associations by Guo, Xingli, Gao, Lin, Wei, Chunshui, Yang, Xiaofei, Zhao, Yi, Dong, Anguo

“…The identification of disease-causing genes is a fundamental challenge in human health and of great importance in improving medical care, and provides a better…”
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A New Role for LOC101928437 in Non-Syndromic Intellectual Disability: Findings from a Family-Based Association Test by Zhou, Shaohe, Shi, Zhangyan, Cui, Meng, Li, Junlin, Ma, Zhe, Shi, Yuanyu, Zheng, Zijian, Zhang, Fuchang, Jin, Tianbo, Geng, Tingting, Chen, Chao, Guo, Yale, Zhou, Jianping, Huang, Shaoping, Guo, Xingli, Gao, Lin, Gong, Pingyuan, Gao, Xiaocai, Zhang, Kejin

“…Non-syndromic intellectual disability (NSID) is mental retardation in persons of normal physical appearance who have no recognisable features apart from…”
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Residue and Dissipation Dynamics of Flusilazole in Apple and Soil by Yu, Shuang, Qin, Dongmei, Wu, Qiong, Guo, Xingli, Han, Lijun, Jiang, Shuren

“…A simple, quick and reliable residue analytical method for flusilazole in apple and soil was developed in this study. The samples were extracted with…”
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DeepGRNCS: deep learning-based framework for jointly inferring gene regulatory networks across cell subpopulations by Lei, Yahui, Huang, Xiao-Tai, Guo, Xingli, Hang Katie Chan, Kei, Gao, Lin

“…Inferring gene regulatory networks (GRNs) allows us to obtain a deeper understanding of cellular function and disease pathogenesis. Recent advances in…”
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Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks by Guo, Xingli, Gao, Lin, Liao, Qi, Xiao, Hui, Ma, Xiaoke, Yang, Xiaofei, Luo, Haitao, Zhao, Guoguang, Bu, Dechao, Jiao, Fei, Shao, Qixiang, Chen, RunSheng, Zhao, Yi

“…More and more evidences demonstrate that the long non-coding RNAs (lncRNAs) play many key roles in diverse biological processes. There is a critical need to…”
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Excess sludge reduction using pilot-scale lysis-cryptic growth system integrated ultrasonic/alkaline disintegration and hydrolysis/acidogenesis pretreatment by Ma, Huaji, Zhang, Shuting, Lu, Xuebin, Xi, Bo, Guo, Xingli, Wang, Han, Duan, Jingxiao

“…► A 400m3/d lysis-cryptic growth system was operated for excess sludge reduction. ► Observed biomass yield of the pilot-scale system was 0.27kg VSS/kg COD…”
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Advances in long noncoding RNAs: identification, structure prediction and function annotation by Guo, Xingli, Gao, Lin, Wang, Yu, Chiu, David K Y, Wang, Tong, Deng, Yue

“…Long noncoding RNAs (lncRNAs), generally longer than 200 nucleotides and with poor protein coding potential, are usually considered collectively as a…”
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Inferring essential proteins from centrality in interconnected multilayer networks by Jin, Haiyan, Zhang, ChenXing, Ma, Mengzhou, Gong, Qianhua, Yu, Liang, Guo, Xingli, Gao, Lin, Wang, Bingbo

“…Computational tool for inferring essential genes and their coding essential proteins based on its topological features in biological network is crucial for…”
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lncSLdb: a resource for long non-coding RNA subcellular localization by Wen, Xiao, Gao, Lin, Guo, Xingli, Li, Xing, Huang, Xiaotai, Wang, Ying, Xu, Haifu, He, Ruijie, Jia, Chenglong, Liang, Feixiang

“…While long non-coding RNAs (lncRNAs) may play important roles in cellular function and biological process, we still know little about them. Growing evidences…”
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Genome-wide identification of the essential protein-coding genes and long non-coding RNAs for human pan-cancer by Zhang, Yuwei, Tao, Yang, Ji, Huihui, Li, Wei, Guo, Xingli, Ng, Derry Minyao, Haleem, Maria, Xi, Yang, Dong, Changzheng, Zhao, Jinshun, Zhang, Lina, Zhang, Xiaohong, Xie, Yangyang, Dai, Xiaoyu, Liao, Qi

“…Abstract Motivation Genome-scale CRISPR/Cas9 system has been a democratized gene editing technique and widely used to investigate gene functions in some…”
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