Search Results - "Guo, Maozu"
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A comprehensive overview and evaluation of circular RNA detection tools
Published in PLoS computational biology (01-06-2017)“…Circular RNA (circRNA) is mainly generated by the splice donor of a downstream exon joining to an upstream splice acceptor, a phenomenon known as backsplicing…”
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A gene regulatory network inference model based on pseudo-siamese network
Published in BMC bioinformatics (21-04-2023)“…Gene regulatory networks (GRNs) arise from the intricate interactions between transcription factors (TFs) and their target genes during the growth and…”
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Predicting functions of maize proteins using graph convolutional network
Published in BMC bioinformatics (16-12-2020)“…Maize (Zea mays ssp. mays L.) is the most widely grown and yield crop in the world, as well as an important model organism for fundamental research of the…”
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Equivariant score-based generative diffusion framework for 3D molecules
Published in BMC bioinformatics (30-05-2024)“…Molecular biology is crucial for drug discovery, protein design, and human health. Due to the vastness of the drug-like chemical space, depending on biomedical…”
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A Deep Learning Model with Signal Decomposition and Informer Network for Equipment Vibration Trend Prediction
Published in Sensors (Basel, Switzerland) (22-06-2023)“…Accurate equipment operation trend prediction plays an important role in ensuring the safe operation of equipment and reducing maintenance costs. Therefore,…”
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Predicting protein-protein interactions using high-quality non-interacting pairs
Published in BMC bioinformatics (31-12-2018)“…Identifying protein-protein interactions (PPIs) is of paramount importance for understanding cellular processes. Machine learning-based approaches have been…”
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A Literature Review of Gene Function Prediction by Modeling Gene Ontology
Published in Frontiers in genetics (24-04-2020)“…Annotating the functional properties of gene products, i.e., RNAs and proteins, is a fundamental task in biology. The Gene Ontology database (GO) was developed…”
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GEFormerDTA: drug target affinity prediction based on transformer graph for early fusion
Published in Scientific reports (28-03-2024)“…Predicting the interaction affinity between drugs and target proteins is crucial for rapid and accurate drug discovery and repositioning. Therefore, more…”
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Detection of Road Crack Images Based on Multistage Feature Fusion and a Texture Awareness Method
Published in Sensors (Basel, Switzerland) (21-05-2024)“…Structural health monitoring for roads is an important task that supports inspection of transportation infrastructure. This paper explores deep learning…”
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Prediction of microRNAs associated with human diseases based on weighted k most similar neighbors
Published in PloS one (08-08-2013)“…The identification of human disease-related microRNAs (disease miRNAs) is important for further investigating their involvement in the pathogenesis of…”
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Density Peaks Clustering Based on Weighted Local Density Sequence and Nearest Neighbor Assignment
Published in IEEE access (2019)“…Density peaks clustering (DPC) is a density-based clustering algorithm with excellent clustering performance including accuracy, automatically detecting the…”
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Rank Entropy-Based Decision Trees for Monotonic Classification
Published in IEEE transactions on knowledge and data engineering (01-11-2012)“…In many decision making tasks, values of features and decision are ordinal. Moreover, there is a monotonic constraint that the objects with better feature…”
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13
ENJ algorithm can construct triple phylogenetic trees
Published in Molecular therapy. Nucleic acids (05-03-2021)“…Phylogenetic analysis is used to analyze the evolution of species according to the characteristics of biological sequences. The analytical results are…”
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Drug repositioning based on individual bi-random walks on a heterogeneous network
Published in BMC bioinformatics (24-12-2019)“…Traditional drug research and development is high cost, time-consuming and risky. Computationally identifying new indications for existing drugs, referred as…”
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Details in the evaluation of circular RNA detection tools: Reply to Chen and Chuang
Published in PLoS computational biology (01-04-2019)“…In their comment, Chen and Chuang [1] pointed out several weak points of our recent paper [2]. Here we respond in detail to clarify the dataset we used in our…”
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Bayesian Neural Network-Based Equipment Operational Trend Prediction Method Using Channel Attention Mechanism
Published in IEEE access (2024)“…This paper proposes a Bayesian neural network method for predicting equipment operational trends based on a channel attention mechanism. Traditional time…”
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Perspectives of Bioinformatics in Big Data Era
Published in Current genomics (01-02-2019)Get full text
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An improved Bayesian network method for reconstructing gene regulatory network based on candidate auto selection
Published in BMC genomics (17-11-2017)“…The reconstruction of gene regulatory network (GRN) from gene expression data can discover regulatory relationships among genes and gain deep insights into the…”
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i6mA-Vote: Cross-Species Identification of DNA N6-Methyladenine Sites in Plant Genomes Based on Ensemble Learning With Voting
Published in Frontiers in plant science (14-02-2022)“…DNA N6-Methyladenine (6mA) is a common epigenetic modification, which plays some significant roles in the growth and development of plants. It is crucial to…”
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Transportation Mode Recognition with Deep Forest based on GPS data
Published in IEEE access (01-01-2020)“…Transportation mode recognition (TMR) is a common but critical task in the human behavior research field, which provides decision support for urban traffic…”
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