Search Results - "Gunturu, Santosh"

The Microbial Genomes Atlas (MiGA) webserver: taxonomic and gene diversity analysis of Archaea and Bacteria at the whole genome level by Rodriguez-R, Luis M, Gunturu, Santosh, Harvey, William T, Rosselló-Mora, Ramon, Tiedje, James M, Cole, James R, Konstantinidis, Konstantinos T

“…Abstract The small subunit ribosomal RNA gene (16S rRNA) has been successfully used to catalogue and study the diversity of prokaryotic species and communities…”
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Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity by Rodriguez-R, Luis M, Gunturu, Santosh, Tiedje, James M, Cole, James R, Konstantinidis, Konstantinos T

“…Estimations of microbial community diversity based on metagenomic data sets are affected, often to an unknown degree, by biases derived from insufficient…”
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Metagenomic analysis reveals the shared and distinct features of the soil resistome across tundra, temperate prairie, and tropical ecosystems by Qian, Xun, Gunturu, Santosh, Guo, Jiarong, Chai, Benli, Cole, James R, Gu, Jie, Tiedje, James M

“…Soil is an important reservoir of antibiotic resistance genes (ARGs), but their potential risk in different ecosystems as well as response to anthropogenic…”
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Primer set 2.0 for highly parallel qPCR array targeting antibiotic resistance genes and mobile genetic elements by Stedtfeld, Robert D, Guo, Xueping, Stedtfeld, Tiffany M, Sheng, Hongjie, Williams, Maggie R, Hauschild, Kristin, Gunturu, Santosh, Tift, Leo, Wang, Fang, Howe, Adina, Chai, Benli, Yin, Daqiang, Cole, James R, Tiedje, James M, Hashsham, Syed A

“…The high-throughput antibiotic resistance gene (ARG) qPCR array, initially published in 2012, is increasingly used to quantify resistance and mobile…”
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Targeted assemblies of cas1 suggest CRISPR-Cas’s response to soil warming by Wu, Ruonan, Chai, Benli, Cole, James R., Gunturu, Santosh K., Guo, Xue, Tian, Renmao, Gu, Ji-Dong, Zhou, Jizhong, Tiedje, James M.

“…There is an increasing interest in the clustered regularly interspaced short palindromic repeats CRISPR-associated protein (CRISPR-Cas) system to reveal…”
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MetaFunPrimer: an Environment-Specific, High-Throughput Primer Design Tool for Improved Quantification of Target Genes by Liu, Jia, Villanueva, Paul, Choi, Jinlyung, Gunturu, Santosh, Ouyang, Yang, Tiemann, Lisa K., Cole, James R., Glanville, Kathryn R., Hall, Steven J., McDaniel, Marshall D., Lee, Jaejin, Howe, Adina

“…Genes belonging to the same functional group may include numerous and variable gene sequences, making characterizing and quantifying difficult. Therefore,…”
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MetaFunPrimer: an Environment-Specific, High-Throughput Primer Design Tool for Improved Quantification of Target Genes by Liu, Jia, Villanueva, Paul, Choi, Jinlyung, Gunturu, Santosh, Ouyang, Yang, Tiemann, Lisa K., Cole, James R., Glanville, Kathryn R., Hall, Steven J., McDaniel, Marshall D., Lee, Jaejin, Howe, Adina

“…Genes belonging to the same functional group may include numerous and variable gene sequences, making characterizing and quantifying difficult. Therefore,…”
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Long-read sequencing revealed cooccurrence, host range, and potential mobility of antibiotic resistome in cow feces by Qian, Xun, Gunturu, Santosh, Sun, Wei, Cole, James R., Norby, Bo, Gu, Jie, Tiedje, James M.

“…While it is well recognized that the environmental resistome is global, diverse, and augmented by human activities, it has been difficult to assess risk…”
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Targeted assemblies of cas1 suggest CRISPR-Cas’s response to soil warming by Wu, Ruonan, Chai, Benli, Cole, James R., Gunturu, Santosh K., Guo, Xue, Tian, Renmao, Gu, Ji-Dong, Zhou, Jizhong, Tiedje, James M.

“…Abstract There is an increasing interest in the clustered regularly interspaced short palindromic repeats CRISPR-associated protein (CRISPR-Cas) system to…”
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Enabling the hypothesis-driven prioritization of ligand candidates in big databases: Screenlamp and its application to GPCR inhibitor discovery for invasive species control by Raschka, Sebastian, Scott, Anne M., Liu, Nan, Gunturu, Santosh, Huertas, Mar, Li, Weiming, Kuhn, Leslie A.

“…While the advantage of screening vast databases of molecules to cover greater molecular diversity is often mentioned, in reality, only a few studies have been…”
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Primer set 2.0 for highly parallel qPCR array targeting antibiotic resistance genes and mobile genetic elements by Stedtfeld, Robert D, Guo, Xueping, Stedtfeld, Tiffany M, Sheng, Hongjie, Williams, Maggie R, Hauschild, Kristin, Gunturu, Santosh, Tift, Leo, Wang, Fang, Howe, Adina, Chai, Benli, Yin, Daqiang, Cole, James R, Tiedje, James M, Hashsham, Syed A

“…The high-throughput antibiotic resistance gene (ARG) qPCR array, initially published in 2012, is increasingly used to quantify resistance and mobile…”
Get full text