Search Results - "Guglielmini, Julien"

Diversification of giant and large eukaryotic dsDNA viruses predated the origin of modern eukaryotes by Guglielmini, Julien, Woo, Anthony C., Krupovic, Mart, Forterre, Patrick, Gaia, Morgan

“…Giant and large eukaryotic double-stranded DNA viruses from the Nucleo-Cytoplasmic Large DNA Virus (NCLDV) assemblage represent a remarkably diverse and…”
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Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance by Guglielmini, Julien, Bourhy, Pascale, Schiettekatte, Olivier, Zinini, Farida, Brisse, Sylvain, Picardeau, Mathieu

“…Leptospira is a highly heterogeneous bacterial genus that can be divided into three evolutionary lineages and >300 serovars. The causative agents of…”
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The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation by Guglielmini, Julien, Quintais, Leonor, Garcillán-Barcia, Maria Pilar, de la Cruz, Fernando, Rocha, Eduardo P C

“…Horizontal gene transfer shapes the genomes of prokaryotes by allowing rapid acquisition of novel adaptive functions. Conjugation allows the broadest range and…”
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Phylogeny of the Varidnaviria Morphogenesis Module: Congruence and Incongruence With the Tree of Life and Viral Taxonomy by Woo, Anthony C., Gaia, Morgan, Guglielmini, Julien, Da Cunha, Violette, Forterre, Patrick

“…Double-stranded DNA viruses of the realm Varidnaviria (formerly PRD1-adenovirus lineage) are characterized by homologous major capsid proteins (MCPs)…”
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Genomic Sequencing of Bordetella pertussis for Epidemiology and Global Surveillance of Whooping Cough by Bouchez, Valérie, Guglielmini, Julien, Dazas, Mélody, Landier, Annie, Toubiana, Julie, Guillot, Sophie, Criscuolo, Alexis, Brisse, Sylvain

“…Bordetella pertussis causes whooping cough, a highly contagious respiratory disease that is reemerging in many world regions. The spread of antigen-deficient…”
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Phylogenetic analysis of Harmonin homology domains by Colcombet-Cazenave, Baptiste, Druart, Karen, Bonnet, Crystel, Petit, Christine, Spérandio, Olivier, Guglielmini, Julien, Wolff, Nicolas

“…Harmonin Homogy Domains (HHD) are recently identified orphan domains of about 70 residues folded in a compact five alpha-helix bundle that proved to be…”
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Proteome remodelling by the stress sigma factor RpoS/σS in Salmonella: identification of small proteins and evidence for post-transcriptional regulation by Lago, Magali, Monteil, Véronique, Douche, Thibaut, Guglielmini, Julien, Criscuolo, Alexis, Maufrais, Corinne, Matondo, Mariette, Norel, Françoise

“…The RpoS/σ S sigma subunit of RNA polymerase is the master regulator of the general stress response in many Gram-negative bacteria. Extensive studies have been…”
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Correction: Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance by Guglielmini, Julien, Bourhy, Pascale, Schiettekatte, Olivier, Zinini, Farida, Brisse, Sylvain, Picardeau, Mathieu

“…[This corrects the article DOI: 10.1371/journal.pntd.0007374.]…”
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A novel cgMLST for genomic surveillance of Yersinia enterocolitica infections in France allowed the detection and investigation of outbreaks in 2017-2021 by Le Guern, Anne-Sophie, Savin, Cyril, Chereau, Fanny, Tessier, Sabrina, Guglielmini, Julien, Brémont, Sylvie, Pizarro-Cerdá, Javier

“…Enteric yersiniosis, the third most common food-borne zoonosis in Europe, is mainly caused by the pathogen . In France the yersiniosis microbiological…”
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Genus-wide Yersinia core-genome multilocus sequence typing for species identification and strain characterization by Savin, Cyril, Criscuolo, Alexis, Guglielmini, Julien, Le Guern, Anne-Sophie, Carniel, Elisabeth, Pizarro-Cerdá, Javier, Brisse, Sylvain

“…The genus comprises species that differ widely in their pathogenic potential and public-health significance. is responsible for plague, while is a prominent…”
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Simulation data for the estimation of numerical constants for approximating pairwise evolutionary distances between amino acid sequences by Bigot, Thomas, Guglielmini, Julien, Criscuolo, Alexis

“…Estimating the number of substitution events per site that have occurred during the evolution of a pair of amino acid sequences is a common task in…”
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Eco-Evolutionary Dynamics of Episomes among Ecologically Cohesive Bacterial Populations by Xue, Hong, Cordero, Otto X, Camas, Francisco M, Trimble, William, Meyer, Folker, Guglielmini, Julien, Rocha, Eduardo P C, Polz, Martin F

“…Although plasmids and other episomes are recognized as key players in horizontal gene transfer among microbes, their diversity and dynamics among ecologically…”
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Automated discovery and phylogenetic analysis of new toxin-antitoxin systems by Guglielmini, Julien, Szpirer, Cédric, Milinkovitch, Michel C

“…Although often viewed as elements "at the service of" bacteria, plasmids exhibit replication and maintenance mechanisms that make them purely "selfish DNA"…”
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Phylogenomics of unusual histone H2A Variants in Bdelloid rotifers by Van Doninck, Karine, Mandigo, Morgan L, Hur, Jae H, Wang, Peter, Guglielmini, Julien, Milinkovitch, Michel C, Lane, William S, Meselson, Matthew

“…Rotifers of Class Bdelloidea are remarkable in having evolved for millions of years, apparently without males and meiosis. In addition, they are unusually…”
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Bacterial toxin-antitoxin systems: Translation inhibitors everywhere by Guglielmini, Julien, Van Melderen, Laurence

“…Toxin-antitoxin (TA) systems are composed of two elements: a toxic protein and an antitoxin which is either an RNA (type I and III) or a protein (type II)…”
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Identification of protein secretion systems in bacterial genomes by Abby, Sophie S., Cury, Jean, Guglielmini, Julien, Néron, Bertrand, Touchon, Marie, Rocha, Eduardo P. C.

“…Bacteria with two cell membranes (diderms) have evolved complex systems for protein secretion. These systems were extensively studied in some model bacteria,…”
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Diversity and evolution of B-family DNA polymerases by Kazlauskas, Darius, Krupovic, Mart, Guglielmini, Julien, Forterre, Patrick, Venclovas, Česlovas

“…Abstract B-family DNA polymerases (PolBs) represent the most common replicases. PolB enzymes that require RNA (or DNA) primed templates for DNA synthesis are…”
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Genomic Epidemiology and Strain Taxonomy of Corynebacterium diphtheriae by Guglielmini, Julien, Hennart, Melanie, Badell, Edgar, Toubiana, Julie, Criscuolo, Alexis, Brisse, Sylvain

“…Corynebacterium diphtheriae is highly transmissible and can cause large diphtheria outbreaks where vaccination coverage is insufficient. Sporadic cases or…”
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Diversity of bacterial type II toxin-antitoxin systems: a comprehensive search and functional analysis of novel families by Leplae, Raphaël, Geeraerts, Damien, Hallez, Régis, Guglielmini, Julien, Drèze, Pierre, Van Melderen, Laurence

“…Type II toxin-antitoxin (TA) systems are generally composed of two genes organized in an operon, encoding a labile antitoxin and a stable toxin. They were…”
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A Dual Barcoding Approach to Bacterial Strain Nomenclature: Genomic Taxonomy of Klebsiella pneumoniae Strains by Hennart, Melanie, Guglielmini, Julien, Bridel, Sébastien, Maiden, Martin C J, Jolley, Keith A., Criscuolo, Alexis, Brisse, Sylvain

“…Abstract Sublineages (SLs) within microbial species can differ widely in their ecology and pathogenicity, and their precise definition is important in basic…”
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