Search Results - "Gugger, Paul F"

Genomic data reveal cryptic lineage diversification and introgression in Californian golden cup oaks (section Protobalanus) by Ortego, Joaquín, Gugger, Paul F., Sork, Victoria L.

“…Here we study hybridization, introgression and lineage diversification in the widely distributed canyon live oak (Quercus chrysolepis) and the relict island…”
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Genome-wide signature of local adaptation linked to variable CpG methylation in oak populations by Platt, Alexander, Gugger, Paul F., Pellegrini, Matteo, Sork, Victoria L.

“…It has long been known that adaptive evolution can occur through genetic mutations in DNA sequence, but it is unclear whether adaptive evolution can occur…”
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High-quality genome and methylomes illustrate features underlying evolutionary success of oaks by Sork, Victoria L., Cokus, Shawn J., Fitz-Gibbon, Sorel T., Zimin, Aleksey V., Puiu, Daniela, Garcia, Jesse A., Gugger, Paul F., Henriquez, Claudia L., Zhen, Ying, Lohmueller, Kirk E., Pellegrini, Matteo, Salzberg, Steven L.

“…The genus Quercus , which emerged ∼55 million years ago during globally warm temperatures, diversified into ∼450 extant species. We present a high-quality de…”
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Climatically stable landscapes predict patterns of genetic structure and admixture in the Californian canyon live oak by Ortego, Joaquín, Gugger, Paul F., Sork, Victoria L.

“…Aim: We studied which factors shape contemporary patterns of genetic structure, diversity and admixture in the canyon live oak (Quereus chrysolepis)…”
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Impacts of human-induced environmental disturbances on hybridization between two ecologically differentiated Californian oak species by Ortego, Joaquín, Gugger, Paul F., Sork, Victoria L.

“…Natural hybridization, which can be involved in local adaptation and in speciation processes, has been linked to different sources of anthropogenic…”
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Receptor for Advanced Glycation End Products (RAGE) and Mechanisms and Therapeutic Opportunities in Diabetes and Cardiovascular Disease: Insights From Human Subjects and Animal Models by Egaña-Gorroño, Lander, López-Díez, Raquel, Yepuri, Gautham, Ramirez, Lisa S, Reverdatto, Sergey, Gugger, Paul F, Shekhtman, Alexander, Ramasamy, Ravichandran, Schmidt, Ann Marie

“…Obesity and diabetes are leading causes of cardiovascular morbidity and mortality. Although extensive strides have been made in the treatments for non-diabetic…”
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Influence of environmental heterogeneity on genetic diversity and structure in an endemic southern Californian oak by ORTEGO, JOAQUÍN, RIORDAN, ERIN C., GUGGER, PAUL F., SORK, VICTORIA L.

“…Understanding how specific environmental factors shape gene flow while disentangling their importance relative to the effects of geographical isolation is a…”
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Evolutionary lessons from California plant phylogeography by Sork, Victoria L., Gugger, Paul F., Chen, Jin-Ming, Werth, Silke

“…Phylogeography documents the spatial distribution of genetic lineages that result from demographic processes, such as population expansion, population…”
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DIAPH1-MFN2 interaction regulates mitochondria-SR/ER contact and modulates ischemic/hypoxic stress by Yepuri, Gautham, Ramirez, Lisa M., Theophall, Gregory G., Reverdatto, Sergei V., Quadri, Nosirudeen, Hasan, Syed Nurul, Bu, Lei, Thiagarajan, Devi, Wilson, Robin, Díez, Raquel López, Gugger, Paul F., Mangar, Kaamashri, Narula, Navneet, Katz, Stuart D., Zhou, Boyan, Li, Huilin, Stotland, Aleksandr B., Gottlieb, Roberta A., Schmidt, Ann Marie, Shekhtman, Alexander, Ramasamy, Ravichandran

“…Inter-organelle contact and communication between mitochondria and sarco/endoplasmic reticulum (SR/ER) maintain cellular homeostasis and are profoundly…”
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Influence of climatic niche suitability and geographical overlap on hybridization patterns among southern Californian oaks by Ortego, Joaquín, Gugger, Paul F., Riordan, Erin C., Sork, Victoria L.

“…Aim Information on the association between geographical patterns of hybridization and the climatic niche requirements and co-occurrence of the species involved…”
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First Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Née (Fagaceae) by Sork, Victoria L, Fitz-Gibbon, Sorel T, Puiu, Daniela, Crepeau, Marc, Gugger, Paul F, Sherman, Rachel, Stevens, Kristian, Langley, Charles H, Pellegrini, Matteo, Salzberg, Steven L

“…Oak represents a valuable natural resource across Northern Hemisphere ecosystems, attracting a large research community studying its genetics, ecology,…”
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Dendroecology meets genomics in the common garden: new insights into climate adaptation by Evans, Margaret E. K., Gugger, Paul F., Lynch, Ann M., Guiterman, Christopher H., Fowler, Joshua C., Klesse, Stefan, Riordan, Erin C.

“…This article is a Commentary on Housset et al., 218: 630–645…”
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Low genetic differentiation between two morphologically and ecologically distinct giant-leaved Mexican oaks by Albarrán-Lara, Ana L., Petit, Remy J., Kremer, Antoine, Caron, Henry, Peñaloza-Ramírez, Juan M., Gugger, Paul F., Dávila-Aranda, Patricia D., Oyama, Ken

“…Quercus magnoliifolia and Q. resinosa are two Mexican white oak species that have been taxonomically reported to exhibit morphological similarities and…”
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Investigating the molecular basis for heterophylly in the aquatic plant Potamogeton octandrus (Potamogetonaceae) with comparative transcriptomics by He, Dingxuan, Guo, Pin, Gugger, Paul F, Guo, Youhao, Liu, Xing, Chen, Jinming

“…Many plant species exhibit different leaf morphologies within a single plant, or heterophylly. The molecular mechanisms regulating this phenomenon, however,…”
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Identification of a R2R3-MYB gene regulating anthocyanin biosynthesis and relationships between its variation and flower color difference in lotus (Nelumbo Adans.) by Sun, Shan-Shan, Gugger, Paul F, Wang, Qing-Feng, Chen, Jin-Ming

“…The lotus (Nelumbonaceae: Nelumbo Adans.) is a highly desired ornamental plant, comprising only two extant species, the sacred lotus (N. nucifera Gaerten.)…”
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DIAPH1 mediates progression of atherosclerosis and regulates hepatic lipid metabolism in mice by Senatus, Laura, Egaña-Gorroño, Lander, López-Díez, Raquel, Bergaya, Sonia, Aranda, Juan Francisco, Amengual, Jaume, Arivazhagan, Lakshmi, Manigrasso, Michaele B., Yepuri, Gautham, Nimma, Ramesh, Mangar, Kaamashri N., Bernadin, Rollanda, Zhou, Boyan, Gugger, Paul F., Li, Huilin, Friedman, Richard A., Theise, Neil D., Shekhtman, Alexander, Fisher, Edward A., Ramasamy, Ravichandran, Schmidt, Ann Marie

“…Atherosclerosis evolves through dysregulated lipid metabolism interwoven with exaggerated inflammation. Previous work implicating the receptor for advanced…”
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Adaptational lag to temperature in valley oak (Quercus lobata) can be mitigated by genome-informed assisted gene flow by Browne, Luke, Wright, Jessica W., Fitz-Gibbon, Sorel, Gugger, Paul F., Sork, Victoria L.

“…Climate change over the next century is predicted to cause widespread maladaptation in natural systems. This prediction, as well as many sustainable management…”
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Species‐wide patterns of DNA methylation variation in Quercus lobata and their association with climate gradients by Gugger, Paul F., Fitz-Gibbon, Sorel, PellEgrini, Matteo, Sork, Victoria L.

“…DNA methylation in plants affects transposon silencing, transcriptional regulation and thus phenotypic variation. One unanswered question is whether DNA…”
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Influence of late Quaternary climate change on present patterns of genetic variation in valley oak, Quercus lobata Née by Gugger, Paul F, Ikegami, Makihiko, Sork, Victoria L

“…Phylogeography and ecological niche models (ENMs) suggest that late Quaternary glacial cycles have played a prominent role in shaping present population…”
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Distinct Expression and Methylation Patterns for Genes with Different Fates following a Single Whole-Genome Duplication in Flowering Plants by Shi, Tao, Rahmani, Razgar Seyed, Gugger, Paul F, Wang, Muhua, Li, Hui, Zhang, Yue, Li, Zhizhong, Wang, Qingfeng, Van de Peer, Yves, Marchal, Kathleen, Chen, Jinming

“…For most sequenced flowering plants, multiple whole-genome duplications (WGDs) are found. Duplicated genes following WGD often have different fates that can…”
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