Search Results - "Gu, Yongfeng"

Polydatin Alleviates Septic Myocardial Injury by Promoting SIRT6-Mediated Autophagy by Yuan, Xiaoyan, Chen, Guo, Guo, Dongfeng, Xu, Lei, Gu, Yongfeng

“…Sepsis is a life-threatening condition. Polydatin (PD), a small natural compound from Polygonum cuspidatum , possesses antioxidant and anti-inflammatory…”
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The interaction between temperature and precipitation on the potential distribution range of Betula ermanii in the alpine treeline ecotone on the Changbai Mountain by Cong, Yu, Gu, Yongfeng, Wang, Wen J., Wang, Lei, Xue, Zhenshan, Chen, Yingyi, Jin, Yinghua, Xu, Jiawei, Li, Mai-He, He, Hong S., Jiang, Ming

“…Alpine treeline ecotones are highly sensitive to climate warming. The low temperature-determined alpine treeline is expected to shift upwards in response to…”
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Explicit design of FPGA-based coprocessors for short-range force computations in molecular dynamics simulations by Gu, Yongfeng, VanCourt, Tom, Herbordt, Martin C.

“…FPGA-based acceleration of molecular dynamics simulations (MD) has been the subject of several recent studies. The short-range force computation, which…”
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Rigid Molecule Docking: FPGA Reconfiguration for Alternative Force Laws by VanCourt, Tom, Gu, Yongfeng, Mundada, Vikas, Herbordt, Martin

“…: Molecular docking is one of the primary computational methods used by pharmaceutical companies to try to reduce the cost of drug discovery. A common docking…”
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How do Multiple Pull Requests Change the Same Code: A Study of Competing Pull Requests in GitHub by Zhang, Xin, Chen, Yang, Gu, Yongfeng, Zou, Weiqin, Xie, Xiaoyuan, Jia, Xiangyang, Xuan, Jifeng

“…GitHub is a widely used collaborative platform for global software development. A pull request plays an important role in bridging code changes with version…”
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System-Level Retiming and Pipelining by Venkataramani, Girish, Yongfeng Gu

“…In this paper, we examine retiming and pipelining in the context of system-level optimization techniques. Our main contributions are: (a) functionally…”
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Does the fault reside in a stack trace? Assisting crash localization by predicting crashing fault residence by Gu, Yongfeng, Xuan, Jifeng, Zhang, Hongyu, Zhang, Lanxin, Fan, Qingna, Xie, Xiaoyuan, Qian, Tieyun

“…•An approach for predicting whether a crashing fault resides in a stack trace.•A learning model based on 89 features from stack traces and source…”
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Automatic Reproducible Crash Detection by Yongfeng Gu, Jifeng Xuan, Tieyun Qian

“…Crash reproduction, which spends much time of developers in reading and understanding source code, is a crucial yet time-consuming task in program debugging…”
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A Rule-based Decision System for Financial Applications by Li, Meng, Zhou, Jun, Yu, Lu, Huang, Xiaoguang, Gu, Yongfeng, Ding, Yi, Ding, Hao, Li, Longfei

“…Decision rules have been widely applied in industrial applications such as finance, medicine, and biology, due to the critical requirement of interpretability…”
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Multi-Objective Configuration Sampling for Performance Ranking in Configurable Systems by Gu, Yongfeng, Chen, Yuntianyi, Jia, Xiangyang, Xuan, Jifeng

“…The problem of performance ranking in configurable systems is to find the optimal (near-optimal) configurations with the best performance. This problem is…”
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Achieving High Performance with FPGA-Based Computing by Herbordt, Martin C., VanCourt, Tom, Gu, Yongfeng, Sukhwani, Bharat, Conti, Al, Model, Josh, DiSabello, Doug

“…Numerous application areas, including bioinformatics and computational biology, demand increasing amounts of processing capability. In many cases, the…”
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FPGA-Based Multigrid Computation for Molecular Dynamics Simulations by Yongfeng Gu, Herbordt, M.C.

“…FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. Implementing long-range forces, however, has only recently…”
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Single Pass, BLAST-Like, Approximate String Matching on FPGAs by Herbordt, J.C., Model, J., Yongfeng Gu, Sukhwani, B., VanCourt, T.

“…Approximate string matching is fundamental to bioinformatics, and has been the subject of numerous FPGA acceleration studies. We address issues with respect to…”
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Study on Ecological Floating Bed Technology for the Landscape Water Treatment by Wang Hongbo, Li Mei, Zhang Kefeng, Wang Yonglei, Gu Yongfeng

“…The aim of this experiment was to evaluate the effect of the floating bed technology which used Canna general is, Acorus calamus and the two plants mixed…”
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Synoptic Weather Types and Long-range Transport Patterns for Ozone Precursors during High-ozone Events in Southern Sweden by Tang, Lin, Karlsson, Per Erik, Gu, Yongfeng, Chen, Deliang, Grennfelt, Peringe

“…We studied long-range transport patterns and related weather types in relation to high-ozone events in southern Sweden. The aim was to deepen the understanding…”
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Accelerating molecular dynamics simulations with configurable circuits by Yongfeng Gu, VanCourt, T., Herbordt, M.C.

“…Molecular dynamics (MD) is of central importance to computational chemistry. Here we show that MD can be implemented efficiently on a COTS FPGA board, and that…”
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Improved Interpolation and System Integration for FPGA-Based Molecular Dynamics Simulations by Yongfeng Gu, VanCourt, T., Herbordt, M.C.

“…FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. The paper describes a new non-bonded force computation…”
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Single pass streaming BLAST on FPGAs by Herbordt, Martin C., Model, Josh, Sukhwani, Bharat, Gu, Yongfeng, VanCourt, Tom

“…Approximate string matching is fundamental to bioinformatics and has been the subject of numerous FPGA acceleration studies. We address issues with respect to…”
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Integrating FPGA Acceleration into the Protomol Molecular Dynamics Code: Preliminary Report by Yongfeng Gu, VanCourt, T., Herbordt, M.C.

“…The authors describe a new pipeline for computing non-bonded forces and its integration into the ProtoMol molecular dynamics (MD) code. There are several…”
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A Comparison Analysis of Constraint-Handling Techniques on Rule Selection Problem in Credit Risk Assessment: An Industrial View by Gu, Yongfeng, Ding, Hao, Gu, Kecai, Huang, Xiaoguang, Wu, Hua

“…The rule selection problem, aiming at selecting a subset of rule candidates, is important in credit risk assessment. In reality, we hope these selected rules…”
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