Search Results - "Grokhovsky, S L"
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Use of β Radiation to Localize the Binding Sites of Mercury Ions and Platinum-Containing Ligand in DNA
Published in Molecular biology (New York) (01-09-2018)“…Composite sequence-specific ligands with DNA-damaging groups may dramatically increase the efficacy of radiotherapy. The most promising damage sensitizers are…”
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Ultrasonic Footprinting
Published in Molecular biology (New York) (01-07-2018)“…Ligand binding influences the dynamics of the DNA helix in both the binding site and adjacent regions. This, in particular, is reflected in the changing…”
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Targeting Holliday junctions by origin DNA-binding protein of herpes simplex virus type 1
Published in Journal of biomolecular structure & dynamics (12-03-2017)“…In the present paper, the interactions of the origin binding protein (OBP) of herpes simplex virus type 1 (HSV1) with synthetic four-way Holliday junctions…”
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Sequence-Specific Minor Groove Binding Ligands as Potential Regulators of Gene Expression in Xenopus Laevis Oocytes
Published in Journal of biomolecular structure & dynamics (01-10-2005)“…The mouse mammary tumor virus (MMTV) promoter is induced by glucocorticoid hormone. A robust hormone- and receptor-dependent gene activation could be…”
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DNA sequence recognition by bis-linked netropsin and distamycin derivatives
Published in FEBS letters (20-11-1998)“…We studied the interaction of cis-diammine Pt(II)-bridged bis-netropsin, cis-diammine Pt(II)-bridged bis-distamycin and oligomethylene-bridged bis-netropsin…”
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Complex of the herpes simplex virus type 1 origin binding protein UL9 with DNA as a platform for the design of a new type of antiviral drugs
Published in Journal of biomolecular structure & dynamics (01-01-2014)“…The herpes simplex virus type 1 origin-binding protein, OBP, is a DNA helicase encoded by the UL9 gene. The protein binds in a sequence-specific manner to the…”
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Specificity of DNA cleavage by ultrasound
Published in Molecular biology (New York) (01-03-2006)“…Cleavage of double-stranded DNA fragments with known nucleotide sequences upon sonication at 22 and 44 kHz was studied by PAGE. The cleavage rate was shown to…”
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Ultrasonic Cleavage of Nicked DNA
Published in Journal of biomolecular structure & dynamics (01-12-2009)“…Structural properties of nicked dsDNA have been an object of numerous studies due to their special role in reparation processes. Here we report experimental…”
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DNA Sequence-Specific Ligands: XII. Synthesis and Cytological Studies of Dimeric Hoechst 33258 Molecules
Published in Russian journal of bioorganic chemistry (01-07-2005)“…We synthesized dimeric Hoechst dye molecules composed of two moieties of Hoechst 33258 fluorescent dye with the phenolic hydroxy groups tethered via…”
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Binding of Bis-linked Netropsin Derivatives in the Parallel-Stranded Hairpin Form to DNA
Published in Journal of biomolecular structure & dynamics (01-04-2001)“…Cis-diammine Pt(II)- bridged bis-netropsin and oligomethylene-bridged bis-netropsin in which two monomers are linked in a tail-to-tail manner bind to the DNA…”
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Sequence-specific cleavage of double-stranded DNA caused by X-ray ionization of the platinum atom in the Pt-Bis-netropsin : DNA complex
Published in Nucleic acids research (25-01-1991)“…An analog of the antibiotic netropsin containing two netropsin-like fragments linked covalently via a platinum atom has been synthesized. DNase I and hydroxyl…”
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Interaction of Topotecan, DNA Topoisomerase I Inhibitor, with Double-Stranded Polydeoxyribonucleotides. 5. Topotecan is Capable of Producing Single- and Double-Strand Breaks in Circular Supercoiled DNA in the Absence of the Enzyme
Published in Molecular biology (New York) (01-11-2003)“…A study was made of the temperature, concentration, and time dependences for the emergence of breaks in the sugar-phosphate backbone of a circular supercoiled…”
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Use of β Radiation to Localize the Binding Sites of Mercury Ions and Platinum-Containing Ligand in DNA
Published in Molekuliarnaia biologiia (01-09-2018)“…Composite sequence-specific ligands with DNA-damaging groups may dramatically increase the efficacy of radiotherapy. The most promising damage sensitizers are…”
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Effect of DNA Local Conformation on the Affinity and Binding Specificity of bis-Netropsins to DNA
Published in Molecular biology (New York) (01-09-2002)“…The interaction of short nucleotide duplexes with bis-netropsins, in which netropsin fragments are linked tail-to-tail via cis-diammineplatinum group ([arrow…”
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Interaction of Topotecan, DNA Topoisomerase I Inhibitor, with Double-stranded Polydeoxyribonucleotides. 4. Topotecan Binds Preferably to the GC Base Pairs of DNA
Published in Molecular biology (New York) (01-09-2002)“…Interaction of topotecan (TPT) with synthetic double-stranded polydeoxyribonucleotides has been studied in solutions of low ionic strength at pH 6.8 by linear…”
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Interaction of Topotecan, DNA Topoisomerase I Inhibitor, with Double-stranded Polydeoxyribonucleotides. 3. Binding at the Minor Groove
Published in Molecular biology (New York) (01-05-2002)“…Interaction of topotecan (TPT) with calf thymus DNA, coliphage T4 DNA, and poly(dGdC) · poly(dG-dC) was studied by optical (linear flow dichroism, UV-vis…”
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Design of sequence-specific DNA binding ligands that use a two-stranded peptide motif for DNA sequence recognition
Published in Journal of biomolecular structure & dynamics (01-08-1996)“…The design and DNA binding activity of beta-structure-forming peptides and netropsin-peptide conjugates are reported. It is found that a pair of…”
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Antiviral and cytotoxic activity of netropsin derivatives in vero cells infected with vaccinia virus and herpes simplex virus type I
Published in Doklady. Biochemistry and biophysics (01-10-2008)“…A study examined the antiviral activity of a series of new netropsin derivatives in Vero E6 cells infected with vaccinia virus and herpes simplex virus type I…”
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The antiviral activity of the combinations of netropsin derivatives with modified nucleosides and phosphonoacetic acid as estimated in the model of herpesvirus type 1 in a vero cell culture
Published in Doklady. Biochemistry and biophysics (01-01-2005)“…(ProQuest: Abstract omitted; see image)[PUBLICATION ABSTRACT]…”
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