Search Results - "Grant M. Zane"

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics by Price, Morgan N, Zane, Grant M, Kuehl, Jennifer V, Melnyk, Ryan A, Wall, Judy D, Deutschbauer, Adam M, Arkin, Adam P

“…For many bacteria with sequenced genomes, we do not understand how they synthesize some amino acids. This makes it challenging to reconstruct their metabolism,…”
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Adeno-Associated Virus (AAV) Gene Delivery: Dissecting Molecular Interactions upon Cell Entry by Large, Edward E, Silveria, Mark A, Zane, Grant M, Weerakoon, Onellah, Chapman, Michael S

“…Human gene therapy has advanced from twentieth-century conception to twenty-first-century reality. The recombinant Adeno-Associated Virus (rAAV) is a major…”
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Effect of the Deletion of qmoABC and the Promoter-Distal Gene Encoding a Hypothetical Protein on Sulfate Reduction in Desulfovibrio vulgaris Hildenborough by Zane, Grant M, Yen, Huei-che Bill, Wall, Judy D

“…The pathway of electrons required for the reduction of sulfate in sulfate-reducing bacteria (SRB) is not yet fully characterized. In order to determine the…”
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The Structure of an AAV5-AAVR Complex at 2.5 Å Resolution: Implications for Cellular Entry and Immune Neutralization of AAV Gene Therapy Vectors by Silveria, Mark A, Large, Edward E, Zane, Grant M, White, Tommi A, Chapman, Michael S

“…Adeno-Associated Virus is the leading vector for gene therapy. Although it is the vector for all in vivo gene therapies approved for clinical use by the US…”
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Novel Mode of Molybdate Inhibition of Desulfovibrio vulgaris Hildenborough by Zane, Grant M, Wall, Judy D, De León, Kara B

“…Sulfate-reducing microorganisms (SRM) are found in multiple environments and play a major role in global carbon and sulfur cycling. Because of their growth…”
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Erosion of functional independence early in the evolution of a microbial mutualism by Hillesland, Kristina L., Lim, Sujung, Flowers, Jason J., Turkarslan, Serdar, Pinel, Nicolas, Zane, Grant M., Elliott, Nicholas, Qin, Yujia, Wu, Liyou, Baliga, Nitin S., Zhou, Jizhong, Wall, Judy D., Stahl, David A.

“…Significance Nature is full of species that cooperate in mutually beneficial interactions to survive. Some are completely dependent on such relationships. How…”
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Large-scale genetic characterization of the model sulfate-reducing bacterium, Desulfovibrio vulgaris Hildenborough by Trotter, Valentine V, Shatsky, Maxim, Price, Morgan N, Juba, Thomas R, Zane, Grant M, De León, Kara B, Majumder, Erica L-W, Gui, Qin, Ali, Rida, Wetmore, Kelly M, Kuehl, Jennifer V, Arkin, Adam P, Wall, Judy D, Deutschbauer, Adam M, Chandonia, John-Marc, Butland, Gareth P

“…Sulfate-reducing bacteria (SRB) are obligate anaerobes that can couple their growth to the reduction of sulfate. Despite the importance of SRB to global…”
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LurR is a regulator of the central lactate oxidation pathway in sulfate-reducing Desulfovibrio species by Rajeev, Lara, Luning, Eric G, Zane, Grant M, Juba, Thomas R, Kazakov, Alexey E, Novichkov, Pavel S, Wall, Judy D, Mukhopadhyay, Aindrila

“…The central carbon/lactate utilization pathway in the model sulfate-reducing bacterium, Desulfovibrio vulgaris Hildenborough, is encoded by the highly…”
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Mechanisms of Chromium and Uranium Toxicity in Pseudomonas stutzeri RCH2 Grown under Anaerobic Nitrate-Reducing Conditions by Thorgersen, Michael P, Lancaster, W Andrew, Ge, Xiaoxuan, Zane, Grant M, Wetmore, Kelly M, Vaccaro, Brian J, Poole, 2nd, Farris L, Younkin, Adam D, Deutschbauer, Adam M, Arkin, Adam P, Wall, Judy D, Adams, Michael W W

“…Chromium and uranium are highly toxic metals that contaminate many natural environments. We investigated their mechanisms of toxicity under anaerobic…”
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Rapid Transposon Liquid Enrichment Sequencing (TnLE-seq) for Gene Fitness Evaluation in Underdeveloped Bacterial Systems by FELS, Samuel R, ZANE, Grant M, BLAKE, Sean M, WALL, Judy D

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Biofilm Interaction Mapping and Analysis (BIMA) of Interspecific Interactions in Pseudomonas Co-culture Biofilms by Kosina, Suzanne M, Rademacher, Peter, Wetmore, Kelly M, de Raad, Markus, Zemla, Marcin, Zane, Grant M, Zulovich, Jennifer J, Chakraborty, Romy, Bowen, Benjamin P, Wall, Judy D, Auer, Manfred, Arkin, Adam P, Deutschbauer, Adam M, Northen, Trent R

“…Pseudomonas species are ubiquitous in nature and include numerous medically, agriculturally and technologically beneficial strains of which the interspecific…”
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Correction: Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics by Price, Morgan N, Zane, Grant M, Kuehl, Jennifer V, Melnyk, Ryan A, Wall, Judy D, Deutschbauer, Adam M, Arkin, Adam P

“…[This corrects the article DOI: 10.1371/journal.pgen.1007147.]…”
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Mechanism for microbial population collapse in a fluctuating resource environment by Turkarslan, Serdar, Raman, Arjun V, Thompson, Anne W, Arens, Christina E, Gillespie, Mark A, von Netzer, Frederick, Hillesland, Kristina L, Stolyar, Sergey, López García de Lomana, Adrian, Reiss, David J, Gorman‐Lewis, Drew, Zane, Grant M, Ranish, Jeffrey A, Wall, Judy D, Stahl, David A, Baliga, Nitin S

“…Managing trade‐offs through gene regulation is believed to confer resilience to a microbial community in a fluctuating resource environment. To investigate…”
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Deconstructing the Dissimilatory Sulfate Reduction Pathway: Isotope Fractionation of a Mutant Unable of Growth on Sulfate by Bertran, Emma, Leavitt, William D, Pellerin, Andre, Zane, Grant M, Wall, Judy D, Halevy, Itay, Wing, Boswell A, Johnston, David T

“…The sulfur isotope record provides key insight into the history of Earth's redox conditions. A detailed understanding of the metabolisms driving this cycle,…”
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Biofilm growth mode promotes maximum carrying capacity and community stability during product inhibition syntrophy by Brileya, Kristen A, Camilleri, Laura B, Zane, Grant M, Wall, Judy D, Fields, Matthew W

“…Sulfate-reducing bacteria (SRB) can interact syntrophically with other community members in the absence of sulfate, and interactions with hydrogen-consuming…”
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New Family of Tungstate-Responsive Transcriptional Regulators in Sulfate-Reducing Bacteria by Kazakov, Alexey E, Rajeev, Lara, Luning, Eric G, Zane, Grant M, Siddartha, Kavya, Rodionov, Dmitry A, Dubchak, Inna, Arkin, Adam P, Wall, Judy D, Mukhopadhyay, Aindrila, Novichkov, Pavel S

“…The trace elements molybdenum and tungsten are essential components of cofactors of many metalloenzymes. However, in sulfate-reducing bacteria, high…”
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Functional Characterization of Crp/Fnr-Type Global Transcriptional Regulators in Desulfovibrio vulgaris Hildenborough by Zhou, Aifen, Chen, Yunyu I, Zane, Grant M, He, Zhili, Hemme, Christopher L, Joachimiak, Marcin P, Baumohl, Jason K, He, Qiang, Fields, Matthew W, Arkin, Adam P, Wall, Judy D, Hazen, Terry C, Zhou, Jizhong

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Genetic basis for nitrate resistance in Desulfovibrio strains by Korte, Hannah L, Fels, Samuel R, Christensen, Geoff A, Price, Morgan N, Kuehl, Jennifer V, Zane, Grant M, Deutschbauer, Adam M, Arkin, Adam P, Wall, Judy D

“…Nitrate is an inhibitor of sulfate-reducing bacteria (SRB). In petroleum production sites, amendments of nitrate and nitrite are used to prevent SRB production…”
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Deletion of the Desulfovibrio vulgaris Carbon Monoxide Sensor Invokes Global Changes in Transcription by Rajeev, Lara, Hillesland, Kristina L, Zane, Grant M, Zhou, Aifen, Joachimiak, Marcin P, He, Zhili, Zhou, Jizhong, Arkin, Adam P, Wall, Judy D, Stahl, David A

“…The carbon monoxide-sensing transcriptional factor CooA has been studied only in hydrogenogenic organisms that can grow using CO as the sole source of energy…”
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Mutant phenotypes for thousands of bacterial genes of unknown function by Price, Morgan N., Wetmore, Kelly M., Waters, R. Jordan, Callaghan, Mark, Ray, Jayashree, Liu, Hualan, Kuehl, Jennifer V., Melnyk, Ryan A., Lamson, Jacob S., Suh, Yumi, Carlson, Hans K., Esquivel, Zuelma, Sadeeshkumar, Harini, Chakraborty, Romy, Zane, Grant M., Rubin, Benjamin E., Wall, Judy D., Visel, Axel, Bristow, James, Blow, Matthew J., Arkin, Adam P., Deutschbauer, Adam M.

“…One-third of all protein-coding genes from bacterial genomes cannot be annotated with a function. Here, to investigate the functions of these genes, we present…”
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