Search Results - "Gorshkov, M. V"

Ultraviolet Photodissociation of Peptides: New Insight on the Mobile Proton Model by Solovyeva, E. M., Pereverzev, A. Y., Gorshkov, M. V., Boyarkin, O. V.

“…In this work, we study the mechanism of peptide photodissociation by ultraviolet irradiation at 193 nm wavelength and discuss the role of ionization proton in…”
Get full text

Probing the mechanisms of ambient ionization by laser-induced fluorescence spectroscopy by Frankevich, V., Nieckarz, R. J., Sagulenko, P. N., Barylyuk, K., Zenobi, R., Levitsky, L. I., Agapov, A. Yu, Perlova, T. Y., Gorshkov, M. V., Tarasova, I. A.

“…The ionization mechanisms of several atmospheric pressure ion sources based on desorption and ionization of samples deposited on a surface were studied…”
Get full text

Standardization of retention time data for AMT tag proteomics database generation by Tarasova, I.A., Guryča, V., Pridatchenko, M.L., Gorshkov, A.V., Kieffer-Jaquinod, S., Evreinov, V.V., Masselon, C.D., Gorshkov, M.V.

“…The combination of liquid chromatography (LC) with mass spectrometry (MS) has become a mainstream proteome analysis strategy. In LC–MS, measured masses possess…”
Get full text

Single Cell Proteogenomics — Immediate Prospects by Moshkovskii, S. A., Lobas, A. A., Gorshkov, M. V.

“…Recent technical advances in genomic technology have led to the explosive growth of transcriptome-wide studies at the level of single cells. The review…”
Get full text

Applicability of the critical-chromatography concept to analysis of proteins: Dependence of retention times on the sequence of amino acid residues in a chain by Gorshkov, A. V., Evreinov, V. V., Pridatchenko, M. L., Tarasova, I. A., Filatova, N. N., Rozdina, I. G., Gorshkov, M. V.

“…The BioLCCC model of the chromatographic separation of biomacromolecules, which involves the concepts of the critical chromatography of polymers, is used to…”
Get full text

Identification of Single Amino Acid Substitutions in Proteogenomics by Moshkovskii, S. A., Ivanov, M. V., Kuznetsova, K. G., Gorshkov, M. V.

“…An important aim of proteogenomics, which combines data of high throughput nucleic acid and protein analysis, is to reliably identify single amino acid…”
Get full text

Use of models of biomacromolecule separation in AMT database generation for shotgun proteomics by Pridatchenko, M. L, Tarasova, I. A, Guryca, V, Kononikhin, A. S, Adams, C, Tolmachev, D. A, Agapov, A. Yu, Evreinov, V. V, Popov, I. A, Nikolaev, E. N, Zubarev, R. A, Gorshkov, A. V, Masselon, C. D, Gorshkov, M. V

“…Generation of a complex proteome database requires use of powerful analytical methods capable of following rapid changes in the proteome due to changing…”
Get full text

Design and Performance of an ESI Interface for Selective External Ion Accumulation Coupled to a Fourier Transform Ion Cyclotron Mass Spectrometer by Belov, Mikhail E, Nikolaev, Evgenii N, Anderson, Gordon A, Udseth, Harold R, Conrads, Thomas P, Veenstra, Timothy D, Masselon, Christophe D, Gorshkov, Mikhail V, Smith, Richard D

“…The coupling of Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) with electrospray ionization has advanced the analysis of large…”
Get full text

viQC: Visual and Intuitive Quality Control for Mass Spectrometry-Based Proteome Analysis by Solovyeva, E. M., Lobas, A. A., Surin, A. K., Levitsky, L. I., Gorshkov, V. A., Gorshkov, M. V.

“…Mass spectrometry-based bottom-up proteomics becomes a method of choice in a broad range of biomedical studies. However, because of the growing complexity of…”
Get full text

Modification of Cysteine Residues for Mass Spectrometry-Based Proteomic Analysis: Facts and Artifacts by Kuznetsova, K. G., Solovyeva, E. M., Kuzikov, A. V., Gorshkov, M. V., Moshkovskii, S. A.

“…Mass spectrometric proteomic analysis at the sample preparation stage involves the artificial reduction of disulfide bonds in proteins formed between cysteine…”
Get full text

ON TAXONOMIC INVARIANTS OF MACROPHYTE ALGAE AND THEIR VIOLATION UNDER EXPOSURE TO ANTHROPOGENIC FACTORS by Semkin, B. I., Varchenko, L. I., Gorshkov, M. V.

“…New mathematical methods for determining of multicomponent invariants are developed by detection of their constancy using the measures of percentage…”
Get full text

Critical chromatography and mass spectrometry of macromolecules: Determination of the position of a functional group in a chain by Gorshkov, A. V., Gorshkov, M. V., Rozdina, I. G., Tarasova, I. A., Filatova, N. N., Evreinov, V. V.

“…The potentials inherent in the method of critical chromatography of macromolecules combined with mass spectrometry for the study of the most complicated…”
Get full text

Initial implementation of an electrodynamic ion funnel with Fourier transform ion cyclotron resonance mass spectrometry by Belov, Mikhail E, Gorshkov, Michael V, Udseth, Harold R, Anderson, Gordon A, Tolmachev, Aleksey V, Prior, David C, Harkewicz, Richard, Smith, Richard D

“…Fourier transform ion cyclotron resonance (FTICR) mass spectrometry has become a widely used method to study biopolymers. The method, in combination with an…”
Get full text

Applicability of the critical chromatography concept to proteomics problems: Experimental study of the dependence of peptide retention time on the sequence of amino acids in the chain by Tarasova, I. A., Gorshkov, A. V., Evreinov, V. V., Adams, K., Zubarev, R. A., Gorshkov, M. V.

“…Experimental data on the separation of synthetic and natural peptides are presented as treated in terms of the separation model proposed by the authors, which…”
Get full text

Predictive Liquid Chromatography of Peptides Based on Hydrophilic Interactions for Mass Spectrometry-Based Proteomics by Lobas, A. A., Levitsky, L. I., Fichtenbaum, A., Surin, A. K., Pridatchenko, M. L., Mitulovic, G., Gorshkov, A. V., Gorshkov, M. V.

“…High-performance liquid chromatography (HPLC) is widely used for separation of complex peptide mixtures before mass spectrometry-based proteome analysis. In…”
Get full text

GroupFilter: A software tool for efficient filtering of Morpheus search engine results by Ivanov, M. V., Levitsky, L. I., Lobas, A. A., Gorshkov, M. V.

“…Morpheus is a search algorithm developed recently for high-resolution tandem mass spectra. According to the developers, its intrinsic property is…”
Get full text

Statistical estimation of multiple measures of similarity by Semkin, B. I., Gorshkov, M. V.

“…In this paper, statistical estimates for linear-fractional multiple measures of similarity of the K ( T , C Δ )-type are considered. Examples of computing…”
Get full text

Applicability of the critical-chromatography concept to proteomics problems: Separation of peptides modeled by a heterogeneous rod by Gorshkov, A. V., Goloborodko, A. A., Pridatchenko, M. L., Tarasova, I. A., Rozdina, I. G., Evreinov, V. V., Gorshkov, M. V.

“…The problems of separation of short peptides are considered in terms of the model of rigid rod adsorption. Analytical expressions relating the retention volume…”
Get full text

Challenges of in vitro conservation of Сitrus germplasm resources by Gorshkov, V. M., Samarina, L. S., Kulyan, R. V., Malyarovskaya, V. I., Ryndin, A. V., Rakhmangulov, R. S., Orlov, Y. L.

“…The main problems of establishment a slow growth in vitro collection of citrus and other tree crops cultivars are high degree of fungal contamination of bud…”
Get full text

On the role of A.P. Shennikov in the development of quantitative evaluation of differentiating diversity of plant communities by Semkin, B. I., Gorshkov, M. V.

“…Two coefficients for estimation of differentiating diversity of plant communities, proposed by A.P. Shennikov, were considered: coefficient of dispersion and…”
Get full text