Search Results - "Goremykin, Vadim V"
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Genomes of Stigonematalean cyanobacteria (subsection V) and the evolution of oxygenic photosynthesis from prokaryotes to plastids
Published in Genome biology and evolution (01-01-2013)“…Cyanobacteria forged two major evolutionary transitions with the invention of oxygenic photosynthesis and the bestowal of photosynthetic lifestyle upon…”
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Systematic error in seed plant phylogenomics
Published in Genome biology and evolution (01-01-2011)“…Resolving the closest relatives of Gnetales has been an enigmatic problem in seed plant phylogeny. The problem is known to be difficult because of the extent…”
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Removal of Noisy Characters from Chloroplast Genome-Scale Data Suggests Revision of Phylogenetic Placements of Amborella and Ceratophyllum
Published in Journal of molecular evolution (01-03-2009)“…It is widely appreciated that noisy, highly variable data can impede phylogeney reconstruction. Researchers have for a long time omitted problematic data from…”
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mitochondrial genome of Malus domestica and the import‐driven hypothesis of mitochondrial genome expansion in seed plants
Published in The Plant journal : for cell and molecular biology (01-08-2012)“…Mitochondrial genomes of spermatophytes are the largest of all organellar genomes. Their large size has been attributed to various factors; however, the…”
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Mitochondrial DNA of Vitis vinifera and the Issue of Rampant Horizontal Gene Transfer
Published in Molecular biology and evolution (01-01-2009)“…The mitochondrial genome of grape (Vitis vinifera), the largest organelle genome sequenced so far, is presented. The genome is 773,279 nt long and has the…”
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Streptophyte algae and the origin of land plants revisited using heterogeneous models with three new algal chloroplast genomes
Published in Molecular biology and evolution (01-01-2014)“…The phylogenetic branching order of the green algal groups that gave rise to land plants remains uncertain despite its fundamental importance to understanding…”
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The Evolutionary Root of Flowering Plants
Published in Systematic biology (01-01-2013)“…Correct rooting of the angiosperm radiation is both challenging and necessary for understanding the origins and evolution of physiological and phenotypic…”
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Analysis of Acorus calamus chloroplast genome and its phylogenetic implications
Published in Molecular biology and evolution (01-09-2005)“…Determining the phylogenetic relationships among the major lines of angiosperms is a long-standing problem, yet the uncertainty as to the phylogenetic affinity…”
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Automated Removal of Noisy Data in Phylogenomic Analyses
Published in Journal of molecular evolution (01-12-2010)“…Noisy data, especially in combination with misalignment and model misspecification can have an adverse effect on phylogeny reconstruction; however, effective…”
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Analysis of the Amborella trichopoda chloroplast genome sequence suggests that amborella is not a basal angiosperm
Published in Molecular biology and evolution (01-09-2003)“…Phylogenetic analyses based on comparison of a limited number of genes recently suggested that Amborella trichopoda is the most ancient angiosperm. Here we…”
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The chloroplast genome of Nymphaea alba: whole-genome analyses and the problem of identifying the most basal angiosperm
Published in Molecular biology and evolution (01-07-2004)“…Angiosperms (flowering plants) dominate contemporary terrestrial flora with roughly 250,000 species, but their origin and early evolution are still poorly…”
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A new test of phylogenetic model fitness addresses the issue of the basal angiosperm phylogeny
Published in Gene (15-10-2006)“…We readdress the issue of phylogeny of the basal extant angiosperms employing a source previously not systematically investigated, specifically, the non-coding…”
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Evolutionary analysis of 58 proteins encoded in six completely sequenced chloroplast genomes: revised molecular estimates of two seed plant divergence times
Published in Plant systematics and evolution (01-01-1997)“…Fifty-eight homologous protein sequences from the completely sequenced chloroplast genomes of Zea mays, Oryza sativa, Nicotiana tabacum, Pinus thunbergii,…”
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