Search Results - "Gopalan, Venkat"

Archaeal/Eukaryal RNase P: subunits, functions and RNA diversification by Jarrous, Nayef, Gopalan, Venkat

“…RNase P, a catalytic ribonucleoprotein (RNP), is best known for its role in precursor tRNA processing. Recent discoveries have revealed that eukaryal RNase P…”
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The amazing potential of fungi: 50 ways we can exploit fungi industrially by Hyde, Kevin D., Xu, Jianchu, Rapior, Sylvie, Jeewon, Rajesh, Lumyong, Saisamorn, Niego, Allen Grace T., Abeywickrama, Pranami D., Aluthmuhandiram, Janith V. S., Brahamanage, Rashika S., Brooks, Siraprapa, Chaiyasen, Amornrat, Chethana, K. W. Thilini, Chomnunti, Putarak, Chepkirui, Clara, Chuankid, Boontiya, de Silva, Nimali I., Doilom, Mingkwan, Faulds, Craig, Gentekaki, Eleni, Gopalan, Venkat, Kakumyan, Pattana, Harishchandra, Dulanjalee, Hemachandran, Hridya, Hongsanan, Sinang, Karunarathna, Anuruddha, Karunarathna, Samantha C., Khan, Sehroon, Kumla, Jaturong, Jayawardena, Ruvishika S., Liu, Jian-Kui, Liu, Ningguo, Luangharn, Thatsanee, Macabeo, Allan Patrick G., Marasinghe, Diana S., Meeks, Dan, Mortimer, Peter E., Mueller, Peter, Nadir, Sadia, Nataraja, Karaba N., Nontachaiyapoom, Sureeporn, O’Brien, Meghan, Penkhrue, Watsana, Phukhamsakda, Chayanard, Ramanan, Uma Shaanker, Rathnayaka, Achala R., Sadaba, Resurreccion B., Sandargo, Birthe, Samarakoon, Binu C., Tennakoon, Danushka S., Siva, Ramamoorthy, Sriprom, Wasan, Suryanarayanan, T. S., Sujarit, Kanaporn, Suwannarach, Nakarin, Suwunwong, Thitipone, Thongbai, Benjarong, Thongklang, Naritsada, Wei, Deping, Wijesinghe, S. Nuwanthika, Winiski, Jake, Yan, Jiye, Yasanthika, Erandi, Stadler, Marc

“…Fungi are an understudied, biotechnologically valuable group of organisms. Due to the immense range of habitats that fungi inhabit, and the consequent need to…”
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Uniformity amid diversity in RNase P by Gopalan, Venkat

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A Land Plant-Specific Transcription Factor Directly Enhances Transcription of a Pathogenic Noncoding RNA Template by DNA-Dependent RNA Polymerase II by Wang, Ying, Qu, Jie, Ji, Shaoyi, Wallace, Andrew J., Wu, Jian, Li, Yi, Gopalan, Venkat, Ding, Biao

“…Some DNA-dependent RNA polymerases (DdRPs) possess RNA-dependent RNA polymerase activity, as was first discovered in the replication of Potato spindle tuber…”
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Use of Proteomic Analysis To Elucidate the Role of Calcium in Acetone-Butanol-Ethanol Fermentation by Clostridium beijerinckii NCIMB 8052 by BEI HAN, UJOR, Victor, LAI, Lien B, GOPALAN, Venkat, EZEJI, Thaddeus Chukwuemeka

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Unexpected diversity of RNase P, an ancient tRNA processing enzyme: Challenges and prospects by Lai, Lien B., Vioque, Agustín, Kirsebom, Leif A., Gopalan, Venkat

“…For an enzyme functioning predominantly in a seemingly housekeeping role of 5′ tRNA maturation, RNase P displays a remarkable diversity in subunit make-up…”
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Both kinds of RNase P in all domains of life: surprises galore by Daniels, Charles J, Lai, Lien B, Chen, Tien-Hao, Gopalan, Venkat

“…RNase P, an essential housekeeping endonuclease needed for 5'-processing of tRNAs, exists in two distinct forms: one with an RNA- and the other with a…”
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Overexpression of stress granule protein TZF1 enhances salt stress tolerance by targeting ACA11 mRNA for degradation in Arabidopsis by He, Siou-Luan, Li, Bin, Zahurancik, Walter J, Arthur, Henry C, Sidharthan, Vaishnavi, Gopalan, Venkat, Wang, Lei, Jang, Jyan-Chyun

“…Tandem CCCH zinc finger (TZF) proteins play diverse roles in plant growth and stress response. Although as many as 11 TZF proteins have been identified in ,…”
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Acetone production in solventogenic Clostridium species: new insights from non-enzymatic decarboxylation of acetoacetate by Han, Bei, Gopalan, Venkat, Ezeji, Thaddeus Chukwuemeka

“…Development of a butanologenic strain with high selectivity for butanol production is often proposed as a possible route for improving the economics of…”
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Ribosomal protein L7Ae is a subunit of archaeal RNase P by Cho, I-Ming, Lai, Lien B., Susanti, Dwi, Mukhopadhyay, Biswarup, Gopalan, Venkat, Altman, Sidney

“…To the mounting evidence of nonribosomal functions for ribosomal proteins, we now add L7Ae as a subunit of archaeal RNase P, a ribonucleoprotein (RNP) that…”
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The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA by Lai, Stella M, Lai, Lien B, Foster, Mark P, Gopalan, Venkat

“…The RNA-binding protein L7Ae, known for its role in translation (as part of ribosomes) and RNA modification (as part of sn/oRNPs), has also been identified as…”
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Dissecting functional cooperation among protein subunits in archaeal RNase P, a catalytic ribonucleoprotein complex by Chen, Wen-Yi, Pulukkunat, Dileep K, Cho, I. Ming, Tsai, Hsin-Yue, Gopalan, Venkat

“…RNase P catalyzes the Mg²⁺-dependent 5'-maturation of precursor tRNAs. Biochemical studies on the bacterial holoenzyme, composed of one catalytic RNase P RNA…”
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Cleavage of Model Substrates by Arabidopsis thaliana PRORP1 Reveals New Insights into Its Substrate Requirements by Mao, Guanzhong, Chen, Tien-Hao, Srivastava, Abhishek S, Kosek, David, Biswas, Pradip K, Gopalan, Venkat, Kirsebom, Leif A

“…Two broad classes of RNase P trim the 5' leader of precursor tRNAs (pre-tRNAs): ribonucleoprotein (RNP)- and proteinaceous (PRORP)-variants. These two RNase P…”
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Ribozyme-Mediated Downregulation Uncovers DNA Integrity Scanning Protein A (DisA) as a Solventogenesis Determinant in Clostridium beijerinckii by Ujor, Victor Chinomso, Lai, Lien B., Okonkwo, Christopher Chukwudi, Gopalan, Venkat, Ezeji, Thaddeus Chukwuemeka

“…Carbon catabolite repression (CCR) limits microbial utilization of lignocellulose-derived pentoses. To relieve CCR in Clostridium beijerinckii NCIMB 8052, we…”
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Functional Reconstitution and Characterization of Pyrococcus furiosus RNase P by Tsai, Hsin-Yue, Pulukkunat, Dileep K., Woznick, Walter K., Gopalan, Venkat

“…RNase P, which catalyzes the magnesium-dependent 5'-end maturation of tRNAs in all three domains of life, is composed of one essential RNA and a varying number…”
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Discovery of a minimal form of RNase P in Pyrobaculum by Lai, Lien B., Chan, Patricia P., Cozen, Aaron E., Bernick, David L., Brown, James W., Gopalan, Venkat, Lowe, Todd M., Altman, Sidney

“…RNase P RNA is an ancient, nearly universal feature of life. As part of the ribonucleoprotein RNase P complex, the RNA component catalyzes essential removal of…”
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Transcriptional control of an essential ribozyme in Drosophila reveals an ancient evolutionary divide in animals by Manivannan, Sathiya N, Lai, Lien B, Gopalan, Venkat, Simcox, Amanda

“…Ribonuclease P (RNase P) is an essential enzyme required for 5'-maturation of tRNA. While an RNA-free, protein-based form of RNase P exists in eukaryotes, the…”
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Thermodynamics of Coupled Folding in the Interaction of Archaeal RNase P Proteins RPP21 and RPP29 by Xu, Yiren, Oruganti, Sri Vidya, Gopalan, Venkat, Foster, Mark P

“…We have used isothermal titration calorimetry (ITC) to identify and describe binding-coupled equilibria in the interaction between two protein subunits of…”
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Serendipitous Discovery of a Competitive Inhibitor of FraB, a Salmonella Deglycase and Drug Target by Thirugnanasambantham, Pankajavalli, Kovvali, Sravya, Cool, Austin, Gao, Yuan, Sabag-Daigle, Anice, Boulanger, Erin F, Mitton-Fry, Mark, Capua, Angela Di, Behrman, Edward J, Wysocki, Vicki H, Lindert, Steffen, Ahmer, Brian M M, Gopalan, Venkat

“…Although salmonellosis, an infectious disease, is a significant global healthcare burden, there are no -specific vaccines or therapeutics for humans. Motivated…”
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Solution Structure of an Archaeal RNase P Binary Protein Complex: Formation of the 30-kDa Complex between Pyrococcus furiosus RPP21 and RPP29 Is Accompanied by Coupled Protein Folding and Highlights Critical Features for Protein–Protein and Protein–RNA Interactions by Xu, Yiren, Amero, Carlos D., Pulukkunat, Dileep K., Gopalan, Venkat, Foster, Mark P.

“…Ribonuclease P (RNase P) is a ribonucleoprotein (RNP) enzyme that catalyzes the Mg 2+-dependent 5′ maturation of precursor tRNAs. In all domains of life, it is…”
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