Search Results - "Gogolewski, Krzysztof"

Revised time estimation of the ancestral human chromosome 2 fusion by Poszewiecka, Barbara, Gogolewski, Krzysztof, Stankiewicz, Paweł, Gambin, Anna

“…Abstract Background The reduction of the chromosome number from 48 in the Great Apes to 46 in modern humans is thought to result from the end-to-end fusion of…”
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Harvest time affects antioxidant capacity, total polyphenol and flavonoid content of Polish St John’s wort’s (Hypericum perforatum L.) flowers by Makarova, Katerina, Sajkowska-Kozielewicz, Joanna J., Zawada, Katarzyna, Olchowik-Grabarek, Ewa, Ciach, Michał Aleksander, Gogolewski, Krzysztof, Dobros, Natalia, Ciechowicz, Paulina, Freichels, Hélène, Gambin, Anna

“…The polyphenol content and antioxidant capacity of hyperforin and hypericin-standardized H. perforatum L. extracts may vary due to the harvest time. In this…”
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PhaseDancer: a novel targeted assembler of segmental duplications unravels the complexity of the human chromosome 2 fusion going from 48 to 46 chromosomes in hominin evolution by Poszewiecka, Barbara, Gogolewski, Krzysztof, Karolak, Justyna A., Stankiewicz, Paweł, Gambin, Anna

“…Abstract Resolving complex genomic regions rich in segmental duplications (SDs) is challenging due to the high error rate of long-read sequencing. Here, we…”
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Low Entropy Sub-Networks Prevent the Integration of Metabolomic and Transcriptomic Data by Gogolewski, Krzysztof, Kostecki, Marcin, Gambin, Anna

“…The constantly and rapidly increasing amount of the biological data gained from many different high-throughput experiments opens up new possibilities for data-…”
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Risk assessment of COVID-19 epidemic resurgence in relation to SARS-CoV-2 variants and vaccination passes by Krueger, Tyll, Gogolewski, Krzysztof, Bodych, Marcin, Gambin, Anna, Giordano, Giulia, Cuschieri, Sarah, Czypionka, Thomas, Perc, Matjaz, Petelos, Elena, Rosińska, Magdalena, Szczurek, Ewa

“…The introduction of COVID-19 vaccination passes (VPs) by many countries coincided with the Delta variant fast becoming dominant across Europe. A thorough…”
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National and subnational short-term forecasting of COVID-19 in Germany and Poland during early 2021 by Bracher, Johannes, Wolffram, Daniel, Deuschel, Jannik, Görgen, Konstantin, Ketterer, Jakob L., Ullrich, Alexander, Abbott, Sam, Barbarossa, Maria V., Bertsimas, Dimitris, Bhatia, Sangeeta, Bodych, Marcin, Bosse, Nikos I., Burgard, Jan Pablo, Castro, Lauren, Fairchild, Geoffrey, Fiedler, Jochen, Fuhrmann, Jan, Funk, Sebastian, Gambin, Anna, Gogolewski, Krzysztof, Heyder, Stefan, Hotz, Thomas, Kheifetz, Yuri, Kirsten, Holger, Krueger, Tyll, Krymova, Ekaterina, Leithäuser, Neele, Li, Michael L., Meinke, Jan H., Miasojedow, Błażej, Michaud, Isaac J., Mohring, Jan, Nouvellet, Pierre, Nowosielski, Jedrzej M., Ozanski, Tomasz, Radwan, Maciej, Rakowski, Franciszek, Scholz, Markus, Soni, Saksham, Srivastava, Ajitesh, Gneiting, Tilmann, Schienle, Melanie

“…Background During the COVID-19 pandemic there has been a strong interest in forecasts of the short-term development of epidemiological indicators to inform…”
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Lethal lung hypoplasia and vascular defects in mice with conditional Foxf1 overexpression by Dharmadhikari, Avinash V, Sun, Jenny J, Gogolewski, Krzysztof, Carofino, Brandi L, Ustiyan, Vladimir, Hill, Misty, Majewski, Tadeusz, Szafranski, Przemyslaw, Justice, Monica J, Ray, Russell S, Dickinson, Mary E, Kalinichenko, Vladimir V, Gambin, Anna, Stankiewicz, Paweł

“…FOXF1 heterozygous point mutations and genomic deletions have been reported in newborns with the neonatally lethal lung developmental disorder, alveolar…”
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TADeus2: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure by Poszewiecka, Barbara, Pienkowski, Victor Murcia, Nowosad, Karol, Robin, Jérôme D, Gogolewski, Krzysztof, Gambin, Anna

“…Abstract In recent years great progress has been made in identification of structural variants (SV) in the human genome. However, the interpretation of SVs,…”
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Data-driven case fatality rate estimation for the primary lineage of SARS-CoV-2 in Poland by Gogolewski, Krzysztof, Miasojedow, Błażej, Sadkowska-Todys, Małgorzata, Stepień, Małgorzata, Demkow, Urszula, Lech, Agnieszka, Szczurek, Ewa, Rabczenko, Daniel, Rosińska, Magdalena, Gambin, Anna

“…•An average case fatality ratio over the first six months after the outbreak of COVID-19 in Poland was 5.43% (95% CI: 5.08% – 5.73%), while among hospitalized…”
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Inferring Molecular Processes Heterogeneity from Transcriptional Data by Lesyng, Bogdan, Lech, Agnieszka, Wronowska, Weronika, Gogolewski, Krzysztof, Gambin, Anna

“…RNA microarrays and RNA-seq are nowadays standard technologies to study the transcriptional activity of cells. Most studies focus on tracking transcriptional…”
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Molecular and clinical analyses of 16q24.1 duplications involving FOXF1 identify an evolutionarily unstable large minisatellite by Dharmadhikari, Avinash V, Gambin, Tomasz, Szafranski, Przemyslaw, Cao, Wenjian, Probst, Frank J, Jin, Weihong, Fang, Ping, Gogolewski, Krzysztof, Gambin, Anna, George-Abraham, Jaya K, Golla, Sailaja, Boidein, Francoise, Duban-Bedu, Benedicte, Delobel, Bruno, Andrieux, Joris, Becker, Kerstin, Holinski-Feder, Elke, Cheung, Sau Wai, Stankiewicz, Pawel

“…Point mutations or genomic deletions of FOXF1 result in a lethal developmental lung disease Alveolar Capillary Dysplasia with Misalignment of Pulmonary Veins…”
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PCA-like Methods for the Integration of Single Cell RNA-seq Data with Metabolic Networks by Gogolewski, Krzysztof, Gambin, Anna

“…Summary form only. The high-throughput RNA-seq technologies were undeniably a breakthrough step in our understanding of human genome functions. Another,…”
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Renal cell carcinoma classification: a case study of pitfalls associated with metabolic landscape analysis by Gogolewski, Krzysztof, Kostecki, Marcin, Gambin, Anna

“…The huge amount of biological data gained from many different sources opens up new possibilities alongside with some dangers in data integration. The latter…”
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