Search Results - "Goater, Richard"

Phandango: an interactive viewer for bacterial population genomics by Hadfield, James, Croucher, Nicholas J, Goater, Richard J, Abudahab, Khalil, Aanensen, David M, Harris, Simon R

“…Abstract Summary Fully exploiting the wealth of data in current bacterial population genomics datasets requires synthesizing and integrating different types of…”
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Microreact: visualizing and sharing data for genomic epidemiology and phylogeography by Argimón, Silvia, Abudahab, Khalil, Goater, Richard J E, Fedosejev, Artemij, Bhai, Jyothish, Glasner, Corinna, Feil, Edward J, Holden, Matthew T G, Yeats, Corin A, Grundmann, Hajo, Spratt, Brian G, Aanensen, David M

“…Visualization is frequently used to aid our interpretation of complex datasets. Within microbial genomics, visualizing the relationships between multiple…”
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A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch by Argimón, Silvia, Yeats, Corin A., Goater, Richard J., Abudahab, Khalil, Taylor, Benjamin, Underwood, Anthony, Sánchez-Busó, Leonor, Wong, Vanessa K., Dyson, Zoe A., Nair, Satheesh, Park, Se Eun, Marks, Florian, Page, Andrew J., Keane, Jacqueline A., Baker, Stephen, Holt, Kathryn E., Dougan, Gordon, Aanensen, David M.

“…As whole-genome sequencing capacity becomes increasingly decentralized, there is a growing opportunity for collaboration and the sharing of surveillance data…”
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Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey by Harris, Simon R, Cole, Michelle J, Spiteri, Gianfranco, Sánchez-Busó, Leonor, Golparian, Daniel, Jacobsson, Susanne, Goater, Richard, Abudahab, Khalil, Yeats, Corin A, Bercot, Beatrice, Borrego, Maria José, Crowley, Brendan, Stefanelli, Paola, Tripodo, Francesco, Abad, Raquel, Aanensen, David M, Unemo, Magnus, Azevedo, Jacinta, Balla, Eszter, Barbara, Christopher, Bergheim, Thea, Borrego, Maria José, Bremer, Viviane, Buder, Susanne, Maikanti-Charalambous, Panayiota, Chisholm, Stephanie, Cowan, Susan, Crowley, Brendan, Crucitti, Tania, Diez, Mercedes, Dudás, Mária, Eastick, Kirstine, Goubard, Agathe, Haller, Maria, Hauksdóttir, Guôrún Svanborg, Hoffmann, Steen, Hughes, Gwenda, Igoe, Derval, Jeverica, Samo, Klavs, Irena, Kløvstad, Hilde, Kohl, Peter, Konte, Vasileia, Linde, Ineke, Mavcutko, Violeta, Melillo, Jackie Maistre, Pakarna, Gatis, Pavlik, Peter, Pieridou, Despo, La Ruche, Guy, Sigmundsdóttir, Guôrún, Soteriou, Soteroulla, Stary, Angelika, Stefanelli, Paola, Suligoi, Barbara, Truska, Peter, Tzelepi, Eva, Unemo, Magnus, Van Benthem, Birgit, Van Dam, Alje, Vazquez, Julio, Velicko, Inga, Verbrugge, Ruth

“…Traditional methods for molecular epidemiology of Neisseria gonorrhoeae are suboptimal. Whole-genome sequencing (WGS) offers ideal resolution to describe…”
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A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch by Sánchez-Busó, Leonor, Yeats, Corin A, Taylor, Benjamin, Goater, Richard J, Underwood, Anthony, Abudahab, Khalil, Argimón, Silvia, Ma, Kevin C, Mortimer, Tatum D, Golparian, Daniel, Cole, Michelle J, Grad, Yonatan H, Martin, Irene, Raphael, Brian H, Shafer, William M, Town, Katy, Wi, Teodora, Harris, Simon R, Unemo, Magnus, Aanensen, David M

“…Antimicrobial-resistant (AMR) Neisseria gonorrhoeae is an urgent threat to public health, as strains resistant to at least one of the two last-line antibiotics…”
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Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in Europe by Aanensen, David M, Feil, Edward J, Holden, Matthew T G, Dordel, Janina, Yeats, Corin A, Fedosejev, Artemij, Goater, Richard, Castillo-Ramírez, Santiago, Corander, Jukka, Colijn, Caroline, Chlebowicz, Monika A, Schouls, Leo, Heck, Max, Pluister, Gerlinde, Ruimy, Raymond, Kahlmeter, Gunnar, Åhman, Jenny, Matuschek, Erika, Friedrich, Alexander W, Parkhill, Julian, Bentley, Stephen D, Spratt, Brian G, Grundmann, Hajo

“…The implementation of routine whole-genome sequencing (WGS) promises to transform our ability to monitor the emergence and spread of bacterial pathogens. Here…”
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Genomic reconstruction of the SARS-CoV-2 epidemic in England by Vöhringer, Harald S., Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V., Gonçalves, Sonia, Jackson, David K., Johnston, Ian, Jung, Alexander W., Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C., Gerstung, Moritz

“…The evolution of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus leads to new variants that warrant timely epidemiological…”
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Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch by Argimón, Silvia, David, Sophia, Underwood, Anthony, Abrudan, Monica, Wheeler, Nicole E, Kekre, Mihir, Abudahab, Khalil, Yeats, Corin A, Goater, Richard, Taylor, Ben, Harste, Harry, Muddyman, Dawn, Feil, Edward J, Brisse, Sylvain, Holt, Kathryn, Donado-Godoy, Pilar, Ravikumar, K L, Okeke, Iruka N, Carlos, Celia, Aanensen, David M

“…Klebsiella species, including the notable pathogen K. pneumoniae, are increasingly associated with antimicrobial resistance (AMR). Genome-based surveillance…”
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Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England by Vöhringer, Harald S., Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V., Gonçalves, Sonia, Jackson, David K., Johnston, Ian, Jung, Alexander W., Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C., Gerstung, Moritz

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Globetrotting strangles: the unbridled national and international transmission of Streptococcus equi between horses

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Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates by Gladstone, Rebecca A, Lo, Stephanie W, Goater, Richard, Yeats, Corin, Taylor, Ben, Hadfield, James, Lees, John A, Croucher, Nicholas J, van Tonder, Andries J, Bentley, Leon J, Quah, Fu Xiang, Blaschke, Anne J, Pershing, Nicole L, Byington, Carrie L, Balaji, Veeraraghavan, Hryniewicz, Waleria, Sigauque, Betuel, Ravikumar, K L, Almeida, Samanta Cristine Grassi, Ochoa, Theresa J, Ho, Pak Leung, du Plessis, Mignon, Ndlangisa, Kedibone M, Cornick, Jennifer E, Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A, Madhi, Shabir A, Hawkins, Paulina A, Pollard, Andrew J, Everett, Dean B, Antonio, Martin, Dagan, Ron, Klugman, Keith P, von Gottberg, Anne, Metcalf, Benjamin J, Li, Yuan, Beall, Bernard W, McGee, Lesley, Breiman, Robert F, Aanensen, David M, Bentley, Stephen D, The Global Pneumococcal Sequencing Consortium

“…Knowledge of pneumococcal lineages, their geographic distribution and antibiotic resistance patterns, can give insights into global pneumococcal disease. We…”
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Globetrotting strangles: the unbridled national and international transmission of Streptococcus equi between horses by Mitchell, Catriona, Steward, Karen F, Charbonneau, Amelia R L, Walsh, Saoirse, Wilson, Hayley, Timoney, John F, Wernery, Ulli, Joseph, Marina, Craig, David, van Maanen, Kees, Hoogkamer-van Gennep, Annelies, Leon, Albertine, Witkowski, Lucjan, Rzewuska, Magdalena, Stefańska, Ilona, Żychska, Monika, van Loon, Gunther, Cursons, Ray, Patty, Olivia, Acke, Els, Gilkerson, James R, El-Hage, Charles, Allen, Joanne, Bannai, Hiroshi, Kinoshita, Yuta, Niwa, Hidekazu, Becú, Teótimo, Pringle, John, Guss, Bengt, Böse, Reinhard, Abbott, Yvonne, Katz, Lisa, Leggett, Bernadette, Buckley, Tom C, Blum, Shlomo E, Cruz López, Fátima, Fernández Ros, Ana, Marotti Campi, Maria Cristina, Preziuso, Silvia, Robinson, Carl, Newton, J Richard, Schofield, Ellen, Brooke, Ben, Boursnell, Mike, de Brauwere, Nicolas, Kirton, Roxane, Barton, Charlotte K, Abudahab, Khalil, Taylor, Ben, Yeats, Corin A, Goater, Richard, Aanensen, David M, Harris, Simon R, Parkhill, Julian, Holden, Matthew T G, Waller, Andrew S

“…The equine disease strangles, which is characterized by the formation of abscesses in the lymph nodes of the head and neck, is one of the most frequently…”
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