Search Results - "Garma, Leonardo"

Applicability of epigenetic age models to next-generation methylation arrays by Garma, Leonardo D, Quintela-Fandino, Miguel

“…Epigenetic clocks are mathematical models used to estimate epigenetic age based on DNA methylation at specific CpG sites. As new methylation microarrays are…”
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Cost-effective and multifunctional acquisition system for in vitro electrophysiological investigations with multi-electrode arrays by Garma, Leonardo D, Matino, Laura, Melle, Giovanni, Moia, Fabio, De Angelis, Francesco, Santoro, Francesca, Dipalo, Michele

“…In vitro multi-electrode array (MEA) technology is nowadays involved in a wide range of applications beyond neuroscience, such as cardiac electrophysiology and…”
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Interhemispheric axonal sprouting occurs after pial removal in mice by Nikouei, Kasra, Garma, Leonardo, Memic, Fatima, Hjerling-Leffler, Jens, Goldschmidt, Ezequiel

“…White matter lacks the kind of plasticity that is present in the cortex, and subcortical injuries often result in permanent neurological deficits. Because…”
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Integrated analysis of transcriptomic data reveals the platelet response in COVID-19 disease by Garma, Leonardo D., Deng, Hansen, Goldschmidt, Ezequiel

“…COVID-19 is associated with an increased risk of thrombotic events. However, the pathogenesis of these complications is unclear and reports on platelet…”
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Demystifying dimensionality reduction techniques in the ‘omics’ era: A practical approach for biological science students by Garma, Leonardo D., Osório, Nuno S.

“…Dimensionality reduction techniques are essential in analyzing large ‘omics’ datasets in biochemistry and molecular biology. Principal component analysis,…”
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Interneuron diversity in the human dorsal striatum by Garma, Leonardo D., Harder, Lisbeth, Barba-Reyes, Juan M., Marco Salas, Sergio, Díez-Salguero, Mónica, Nilsson, Mats, Serrano-Pozo, Alberto, Hyman, Bradley T., Muñoz-Manchado, Ana B.

“…Deciphering the striatal interneuron diversity is key to understanding the basal ganglia circuit and to untangling the complex neurological and psychiatric…”
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How many protein-protein interactions types exist in nature? by Garma, Leonardo, Mukherjee, Srayanta, Mitra, Pralay, Zhang, Yang

“…"Protein quaternary structure universe" refers to the ensemble of all protein-protein complexes across all organisms in nature. The number of quaternary folds…”
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Structure-based classification of FAD binding sites: A comparative study of structural alignment tools by Garma, Leonardo D., Medina, Milagros, Juffer, André H.

“…ABSTRACT A total of six different structural alignment tools (TM‐Align, TriangleMatch, CLICK, ProBis, SiteEngine and GA‐SI) were assessed for their ability to…”
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Characterization of the Coupling between Out‐of‐Plane Graphene and Electrogenic Cells by Matino, Laura, Rastogi, Sahil K., Garma, Leonardo D., Cohen‐Karni, Tzahi, Santoro, Francesca

“…The cell‐chip coupling is in general regulated by the interplay between cells and the material surface at the interface. Electroactive planar materials have…”
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OLIGODENDROCYTES AS A CRITICAL CELL-TYPE IN PARKINSON'S DISEASE by Reyes, Juan Manuel Barba, Harder, Lisbeth, Salguero, Mónica Díez, Garma, Leonardo, Pozo, Alberto Serrano, Hyman, Bradley, Manchado, Ana Muñoz

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DECIPHERING THE INTERNEURON DIVERSITY IN THE HUMAN CAUDATE NUCLEUS AND PUTAMEN USING SNRNA-SEQ by Manchado, Ana Muñoz, Garma, Leonardo, Harder, Lisbeth, Reyes, Juan Manuel Barba, Salguero, Mónica Díez, Pozo, Alberto Serrano, Hyman, Bradley

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GPR37 processing in neurodegeneration: a potential marker for Parkinson’s Disease progression rate by Argerich, Josep, Garma, Leonardo D., López-Cano, Marc, Álvarez-Montoya, Paula, Gómez-Acero, Laura, Fernández-Dueñas, Víctor, Muñoz-Manchado, Ana B., Aso, Ester, Boxer, Adam, Andres-Benito, Pol, Svenningsson, Per, Ciruela, Francisco

“…The orphan G protein-coupled receptor 37 (GPR37), widely associated with Parkinson’s disease (PD), undergoes proteolytic processing under physiological…”
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Biomaterials: Characterization of the Coupling between Out‐of‐Plane Graphene and Electrogenic Cells (Adv. Mater. Interfaces 18/2020) by Matino, Laura, Rastogi, Sahil K., Garma, Leonardo D., Cohen‐Karni, Tzahi, Santoro, Francesca

“…Structured platforms represent great tools to mimic part of the complex signal milieu cells receive in vivo. In parallel, biological responses to the precise…”
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Wnt5a Deficiency Leads to Anomalies in Ureteric Tree Development, Tubular Epithelial Cell Organization and Basement Membrane Integrity Pointing to a Role in Kidney Collecting Duct Patterning by Pietilä, Ilkka, Prunskaite-Hyyryläinen, Renata, Kaisto, Susanna, Tika, Elisavet, van Eerde, Albertien M, Salo, Antti M, Garma, Leonardo, Miinalainen, Ilkka, Feitz, Wout F, Bongers, Ernie M H F, Juffer, André, Knoers, Nine V A M, Renkema, Kirsten Y, Myllyharju, Johanna, Vainio, Seppo J

“…The Wnts can be considered as candidates for the Congenital Anomaly of Kidney and Urinary Tract, CAKUT diseases since they take part in the control of kidney…”
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Comparison of non-sequential sets of protein residues by Garma, Leonardo D., Juffer, André H.

“…•The vast majority of binding sites for small ligands are shown to be set of sparsely distributed amino-acids.•A method for the comparison of non-sequential…”
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Membrane Poration Mechanisms at the Cell–Nanostructure Interface by Dipalo, Michele, Caprettini, Valeria, Bruno, Giulia, Caliendo, Fabio, Garma, Leonardo D., Melle, Giovanni, Dukhinova, Marina, Siciliano, Velia, Santoro, Francesca, De Angelis, Francesco

“…3D vertical nanostructures have become one of the most significant methods for interfacing cells and the nanoscale and for accessing significant intracellular…”
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S tructure‐based classification of FAD binding sites: A comparative study of structural alignment tools by Garma, Leonardo D., Medina, Milagros, Juffer, André H.

“…ABSTRACT A total of six different structural alignment tools (TM‐Align, TriangleMatch, CLICK, ProBis, SiteEngine and GA‐SI) were assessed for their ability to…”
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A cost-effective ecosystem for the study of electrogenic cells by Garma, Leonardo D., Ferrari, Laura, DiPalo, Michele, Greco, Francesco, Santoro, Francesca

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3D printable composites of modified cellulose fibers and conductive polymers and their use in wearable electronics by Jain, Karishma, Wang, Zhen, Garma, Leonardo D., Engel, Emile, Ciftci, Göksu Cinar, Fager, Cecilia, Larsson, Per A., Wågberg, Lars

“…There are many bioelectronic applications where the additive manufacturing of conductive polymers may be of use. This method is cheap, versatile and allows…”
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