Search Results - "Garfinkel, D. J"

Genome evolution mediated by Ty elements in Saccharomyces by Garfinkel, D J

“…How mobile genetic elements molded eukaryotic genomes is a key evolutionary question that gained wider popularity when mobile DNA sequences were shown to…”
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Transcriptional silencing of Ty1 elements in the RDN1 locus of yeast by Bryk, M, Banerjee, M, Murphy, M, Knudsen, K E, Garfinkel, D J, Curcio, M J

“…We demonstrate that in Saccharomyces cerevisiae, the tandem array of ribosomal RNA genes (RDN1) is a target for integration of the Ty1 retrotransposon that…”
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Chemical Cleavage at Aspartyl Residues for Protein Identification by Li, Aiqun, Sowder, Raymond C, Henderson, Louis E, Moore, Sharon P, Garfinkel, David J, Fisher, Robert J

“…An alternative method to enzymatic digestion for protein identification by mass spectrometry has been developed that is based on chemical cleavage by formic…”
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Single-Step Selection for Ty1 Element Retrotransposition by Curcio, M. Joan, Garfinkel, David J.

“…The yeast retrotransposon Ty1 has been tagged with a reporter gene that allows selection of RNA-mediated transposition events and is applicable to the study of…”
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The Genomic RNA in Ty1 Virus-Like Particles Is Dimeric by Feng, Y X, Moore, S P, Garfinkel, D J, Rein, A

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Heterogeneous functional Ty1 elements are abundant in the Saccharomyces cerevisiae genome by Curcio, M.J, Garfinkel, D.J

“…Despite the abundance of Ty1 RNA in Saccharomyces cerevisiae, Ty1 retrotransposition is a rare event. To determine whether transpositional dormancy is the…”
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Posttranslational control of Ty1 retrotransposition occurs at the level of protein processing by CURCIO, M. J, GARFINKEL, D. J

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A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae by Kawakami, K, Pande, S, Faiola, B, Moore, D.P, Boeke, J.D, Farabaugh, P.J, Strathern, J.N, Nakamura, Y, Garfinkel, D.J

“…Translation of the yeast retrotransposon Ty1 TYA1(gag)-TYB1(pol) gene occurs by a +1 ribosomal frameshifting event at the sequence CUU AGG C. Because…”
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Efficient homologous recombination of Ty1 element cDNA when integration is blocked by Sharon, G, Burkett, T J, Garfinkel, D J

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Influences of Histone Stoichiometry on the Target Site Preference of Retrotransposons Ty1 and Ty2 in Saccharomyces cerevisiae by Rinckel, L. A, Garfinkel, D. J

“…In Saccharomyces cerevisiae, the target site specificity of the retrotransposon Ty1 appears to involve the Ty integration complex recognizing chromatin…”
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Ty elements transpose through an RNA intermediate by Boeke, J D, Garfinkel, D J, Styles, C A, Fink, G R

“…We have followed Ty transposition with a donor Ty element, TyH3, whose expression is under the control of the GAL1 promoter. Sequence analysis reveals dramatic…”
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Correct Integration of Model Substrates by Ty1 Integrase by Moore, S P, Garfinkel, D J

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Expression and partial purification of enzymatically active recombinant Ty1 integrase in Saccharomyces cerevisiae by Moore, S.P, Garfinkel, D.J

“…Integration of the Saccharomyces cerevisiae retrotransposon Ty1 into the genome requires Ty1 integrase (IN). Apparent functions of Ty1 IN are target-site…”
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MGA2 or SPT23 is required for transcription of the Delta 9 fatty acid desaturase gene, OLE1, and nuclear membrane integrity in Saccharomyces cerevisiae by Zhang, S, Skalsky, Y, Garfinkel, D J

“…MGA2 and SPT23 are functionally and genetically redundant homologs in Saccharomyces cerevisiae. Both genes are implicated in the transcription of a subset of…”
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Functional organization of the retrotransposon Ty from Saccharomyces cerevisiae: Ty protease is required for transposition by YOUNGREN, S. D, BOEKE, J. D, SANDERS, N. J, GARFINKEL, D. J

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HIV reverse transcription in yeast by Nissley, D. V, Garfinkel, D. J, Strathern, J. N

“…The study of human immunodeficiency virus (HIV) reverse transcriptase/ribonuclease H (RT/RH) and other medically important reverse transcriptases would be…”
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Agrobacterium tumefaciens mutants affected in crown gall tumorigenesis and octopine catabolism by Garfinkel, D.J, Nester, E.W

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Genetic redundancy between SPT23 and MGA2: regulators of Ty-induced mutations and Ty1 transcription in Saccharomyces cerevisiae by Zhang, Shirong, Burkett, Thomas J., Yamashita, Ichiro, Garfinkel, David J.

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Proteolytic processing of pol-TYB proteins from the yeast retrotransposon Ty1 by Garfinkel, D.J. (NCI-Frederick Cancer Research and Development Center, Frederick, MD), Hedge, A.M, Youngren, S.D, Copeland, T.D

“…Using antibodies directed against the TYB1 protein of the transpositionally competent retrotransposon Ty1-H3, we have identified three mature proteins of 23,…”
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Genetic loose change: How retroelements and reverse transcriptase heal broken chromosomes by Garfinkel, David J.

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