Search Results - "Ganley, D."

The conservation landscape of the human ribosomal RNA gene repeats by Agrawal, Saumya, Ganley, Austen R D

“…Ribosomal RNA gene repeats (rDNA) encode ribosomal RNA, a major component of ribosomes. Ribosome biogenesis is central to cellular metabolic regulation, and…”
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Direct liquid transmission of sound has little impact on fermentation performance in Saccharomyces cerevisiae by Benitez, Rachel, Harris, Alastair, Mansfield, Evie, Silcock, Pat, Eyres, Graham, Villas-Bôas, Silas G, Jeffs, Andrew, Ganley, Austen R D

“…Sound is a physical stimulus that has the potential to affect various growth parameters of microorganisms. However, the effects of audible sound on microbes…”
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Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae by Winter, David J, Ganley, Austen R D, Young, Carolyn A, Liachko, Ivan, Schardl, Christopher L, Dupont, Pierre-Yves, Berry, Daniel, Ram, Arvina, Scott, Barry, Cox, Murray P

“…Structural features of genomes, including the three-dimensional arrangement of DNA in the nucleus, are increasingly seen as key contributors to the regulation…”
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Recombination Regulation by Transcription-Induced Cohesin Dissociation in rDNA Repeats by Kobayashi, Takehiko, Ganley, Austen R. D

“…Organisms maintain ribosomal RNA gene repeats (rDNA) at stable copy numbers by recombination; the loss of repeats results in gene amplification. Here we report…”
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The Case of the Missing Ancient Fungal Polyploids by Campbell, Matthew A., Ganley, Austen R. D., Gabaldón, Toni, Cox, Murray P.

“…Polyploidy—the increase in the number of whole chromosome sets—is an important evolutionary force in eukaryotes. Polyploidy is well recognized throughout the…”
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The Effect of Sound Frequency and Intensity on Yeast Growth, Fermentation Performance and Volatile Composition of Beer by Adadi, Parise, Harris, Alastair, Bremer, Phil, Silcock, Patrick, Ganley, Austen R D, Jeffs, Andrew G, Eyres, Graham T

“…This study investigated the impact of varying sound conditions (frequency and intensity) on yeast growth, fermentation performance and production of volatile…”
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Biochar in co-contaminated soil manipulates arsenic solubility and microbiological community structure, and promotes organochlorine degradation by Gregory, Samuel J, Anderson, Christopher W N, Camps-Arbestain, Marta, Biggs, Patrick J, Ganley, Austen R D, O'Sullivan, Justin M, McManus, Michael T

“…We examined the effect of biochar on the water-soluble arsenic (As) concentration and the extent of organochlorine degradation in a co-contaminated historic…”
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Resolving Arthropod Phylogeny: Exploring Phylogenetic Signal within 41 kb of Protein-Coding Nuclear Gene Sequence by Regier, Jerome C., Shultz, Jeffrey W., Ganley, Austen R. D., Hussey, April, Shi, Diane, Ball, Bernard, Zwick, Andreas, Stajich, Jason E., Cummings, Michael P., Martin, Joel W., Cunningham, Clifford W.

“…This study attempts to resolve relationships among and within the four basal arthropod lineages (Pancrustacea, Myriapoda, Euchelicerata, Pycnogonida) and to…”
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An interspecific fungal hybrid reveals cross-kingdom rules for allopolyploid gene expression patterns by Cox, Murray P, Dong, Ting, Shen, Genggeng, Dalvi, Yogesh, Scott, D Barry, Ganley, Austen R D

“…Polyploidy, a state in which the chromosome complement has undergone an increase, is a major force in evolution. Understanding the consequences of polyploidy…”
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Fragmentation of an aflatoxin-like gene cluster in a forest pathogen by Bradshaw, Rosie E., Slot, Jason C., Moore, Geromy G., Chettri, Pranav, Wit, Pierre J. G. M., Ehrlich, Kenneth C., Ganley, Austen R. D., Olson, Malin A., Rokas, Antonis, Carbone, Ignazio, Cox, Murray P.

“…Plant pathogens use a complex arsenal of weapons, such as toxic secondary metabolites, to invade and destroy their hosts. Knowledge of how secondary metabolite…”
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HyLiTE: accurate and flexible analysis of gene expression in hybrid and allopolyploid species by Duchemin, Wandrille, Dupont, Pierre-Yves, Campbell, Matthew A, Ganley, Austen R D, Cox, Murray P

“…Forming a new species through the merger of two or more divergent parent species is increasingly seen as a key phenomenon in the evolution of many biological…”
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Sound Stimulation Can Affect Saccharomyces cerevisiae Growth and Production of Volatile Metabolites in Liquid Medium by Harris, Alastair, Lindsay, Melodie A., Ganley, Austen R. D., Jeffs, Andrew, Villas-Boas, Silas G.

“…The biological effect of sound on microorganisms has been a field of interest for many years, with studies mostly focusing on ultrasonic and infrasonic…”
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rDNA Chromatin Activity Status as a Biomarker of Sensitivity to the RNA Polymerase I Transcription Inhibitor CX-5461 by Son, Jinbae, Hannan, Katherine M, Poortinga, Gretchen, Hein, Nadine, Cameron, Donald P, Ganley, Austen R D, Sheppard, Karen E, Pearson, Richard B, Hannan, Ross D, Sanij, Elaine

“…Hyperactivation of RNA polymerase I (Pol I) transcription of ribosomal RNA (rRNA) genes (rDNA) is a key determinant of growth and proliferation and a…”
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Telomere-to-Telomere Genome Sequences across a Single Genus Reveal Highly Variable Chromosome Rearrangement Rates but Absolute Stasis of Chromosome Number by Quenu, Mathieu, Treindl, Artemis D., Lee, Kate, Takemoto, Daigo, Thünen, Torsten, Ashrafi, Samad, Winter, David, Ganley, Austen R. D., Leuchtmann, Adrian, Young, Carolyn A., Cox, Murray P.

“…Genome rearrangements in filamentous fungi are prevalent but little is known about the modalities of their evolution, in part because few complete genomes are…”
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Multilocus sequence typing suggests the chytrid pathogen of amphibians is a recently emerged clone by Morehouse, Erica A., James, Timothy Y., Ganley, Austen R. D., Vilgalys, Rytas, Berger, Lee, Murphy, Peter J., Longcore, Joyce E.

“…Chytridiomycosis is a recently identified fungal disease associated with global population declines of frogs. Although the fungus, Batrachochytrium…”
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Yeast hypertrophy: cause or consequence of aging? Reply to Bilinski et al by Ganley, Austen R.D., Breitenbach, Michael, Kennedy, Brian K., Kobayashi, Takehiko

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Ribosomal DNA and cellular senescence: new evidence supporting the connection between rDNA and aging by Ganley, Austen R. D., Kobayashi, Takehiko

“…Abstract The yeast Saccharomyces cerevisiae is a powerful model system to understand the molecular basis of aging. It has been known for over 50 years that…”
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Cellular Senescence in Yeast Is Regulated by rDNA Noncoding Transcription by Saka, Kimiko, Ide, Satoru, Ganley, Austen R.D., Kobayashi, Takehiko

“…Genomic instability is a conserved factor in lifespan reduction, although the molecular mechanism is not known [1]. Studies in the yeast Saccharomyces…”
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Analytical formulation for the shielding effectiveness of enclosures with apertures by Robinson, M.P., Benson, T.M., Christopoulos, C., Dawson, J.F., Ganley, M.D., Marvin, A.C., Porter, S.J., Thomas, D.W.P.

“…An analytical formulation has been developed for the shielding effectiveness of a rectangular enclosure with an aperture. Both the magnetic and electric…”
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Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data by Ganley, Austen R D, Kobayashi, Takehiko

“…Repeat families within genomes are often maintained with similar sequences. Traditionally, this has been explained by concerted evolution, where repeats in an…”
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