Search Results - "Gallaher, D"

Multiomics resolution of molecular events during a day in the life of Chlamydomonas by Strenkert, Daniela, Schmollinger, Stefan, Gallaher, Sean D., Salomé, Patrice A., Purvine, Samuel O., Nicora, Carrie D., Mettler-Altmann, Tabea, Soubeyrand, Eric, Weber, Andreas P. M., Lipton, Mary S., Basset, Gilles J., Merchant, Sabeeha S.

“…The unicellular green alga Chlamydomonas reinhardtii displays metabolic flexibility in response to a changing environment. We analyzed expression patterns of…”
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An epigenetic gene silencing pathway selectively acting on transgenic DNA in the green alga Chlamydomonas by Neupert, Juliane, Gallaher, Sean D., Lu, Yinghong, Strenkert, Daniela, Segal, Na’ama, Barahimipour, Rouhollah, Fitz-Gibbon, Sorel T., Schroda, Michael, Merchant, Sabeeha S., Bock, Ralph

“…Silencing of exogenous DNA can make transgene expression very inefficient. Genetic screens in the model alga Chlamydomonas have demonstrated that transgene…”
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High‐throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression patterns and transcript speciation, and evaluate diversity among laboratory strains and wild isolates by Gallaher, Sean D., Fitz‐Gibbon, Sorel T., Strenkert, Daniela, Purvine, Samuel O., Pellegrini, Matteo, Merchant, Sabeeha S.

“…Summary Chlamydomonas reinhardtii is a unicellular chlorophyte alga that is widely studied as a reference organism for understanding photosynthesis, sensory…”
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Three Acyltransferases and Nitrogen-responsive Regulator Are Implicated in Nitrogen Starvation-induced Triacylglycerol Accumulation in Chlamydomonas by Boyle, Nanette R., Page, Mark Dudley, Liu, Bensheng, Blaby, Ian K., Casero, David, Kropat, Janette, Cokus, Shawn J., Hong-Hermesdorf, Anne, Shaw, Johnathan, Karpowicz, Steven J., Gallaher, Sean D., Johnson, Shannon, Benning, Christoph, Pellegrini, Matteo, Grossman, Arthur, Merchant, Sabeeha S.

“…Algae have recently gained attention as a potential source for biodiesel; however, much is still unknown about the biological triggers that cause the…”
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A Gelatin Microdroplet Platform for High‐Throughput Sorting of Hyperproducing Single‐Cell‐Derived Microalgal Clones by Li, Ming, Zee, Mark, Riche, Carson T., Tofig, Bobby, Gallaher, Sean D., Merchant, Sabeeha S., Damoiseaux, Robert, Goda, Keisuke, Di Carlo, Dino

“…Microalgae are an attractive feedstock organism for sustainable production of biofuels, chemicals, and biomaterials, but the ability to rationally engineer…”
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High-viscosity dietary fibers reduce adiposity and decrease hepatic steatosis in rats fed a high-fat diet by Brockman, David A, Chen, Xiaoli, Gallaher, Daniel D

“…Viscous dietary fiber consumption lowers the postprandial glucose curve and may decrease obesity and associated comorbidities such as insulin resistance and…”
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Regulation of Oxygenic Photosynthesis during Trophic Transitions in the Green Alga Chromochloris zofingiensis by Roth, Melissa S, Gallaher, Sean D, Westcott, Daniel J, Iwai, Masakazu, Louie, Katherine B, Mueller, Maria, Walter, Andreas, Foflonker, Fatima, Bowen, Benjamin P, Ataii, Nassim N, Song, Junha, Chen, Jian-Hua, Blaby-Haas, Crysten E, Larabell, Carolyn, Auer, Manfred, Northen, Trent R, Merchant, Sabeeha S, Niyogi, Krishna K

“…Light and nutrients are critical regulators of photosynthesis and metabolism in plants and algae. Many algae have the metabolic flexibility to grow…”
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Chlamydomonas Genome Resource for Laboratory Strains Reveals a Mosaic of Sequence Variation, Identifies True Strain Histories, and Enables Strain-Specific Studies by Gallaher, Sean D., Fitz-Gibbon, Sorel T., Glaesener, Anne G., Pellegrini, Matteo, Merchant, Sabeeha S.

“…Chlamydomonas reinhardtii is a widely used reference organism in studies of photosynthesis, cilia, and biofuels. Most research in this field uses a few dozen…”
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Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas by Hong-Hermesdorf, Anne, Miethke, Marcus, Gallaher, Sean D, Kropat, Janette, Dodani, Sheel C, Chan, Jefferson, Barupala, Dulmini, Domaille, Dylan W, Shirasaki, Dyna I, Loo, Joseph A, Weber, Peter K, Pett-Ridge, Jennifer, Stemmler, Timothy L, Chang, Christopher J, Merchant, Sabeeha S

“…A collection of chemical tools and spectroscopic techniques demonstrate that Zn availability influences Cu + storage and localization in the green alga…”
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Widespread polycistronic gene expression in green algae by Gallaher, Sean D., Craig, Rory J., Ganesan, Iniyan, Purvine, Samuel O., McCorkle, Sean R., Grimwood, Jane, Strenkert, Daniela, Davidi, Lital, Roth, Melissa S., Jeffers, Tim L., Lipton, Mary S., Niyogi, Krishna K., Schmutz, Jeremy, Theg, Steven M., Blaby-Haas, Crysten E., Merchant, Sabeeha S.

“…Polycistronic gene expression, common in prokaryotes, was thought to be extremely rare in eukaryotes. The development of long-read sequencing of full-length…”
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Copper economy in Chlamydomonas: Prioritized allocation and reallocation of copper to respiration vs. photosynthesis by Kropat, Janette, Gallaher, Sean D, Urzica, Eugen I, Nakamoto, Stacie S, Strenkert, Daniela, Tottey, Stephen, Mason, Andrew Z, Merchant, Sabeeha S

“…Significance Many inorganic elements, because they are required for catalysis or as structural components in biomolecules, are essential nutrients for life. In…”
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The path to triacylglyceride obesity in the sta6 strain of Chlamydomonas reinhardtii by Goodenough, Ursula, Blaby, Ian, Casero, David, Gallaher, Sean D, Goodson, Carrie, Johnson, Shannon, Lee, Jae-Hyeok, Merchant, Sabeeha S, Pellegrini, Matteo, Roth, Robyn, Rusch, Jannette, Singh, Manmilan, Umen, James G, Weiss, Taylor L, Wulan, Tuya

“…When the sta6 (starch-null) strain of the green microalga Chlamydomonas reinhardtii is nitrogen starved in acetate and then "boosted" after 2 days with…”
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Systems-Level Analysis of Nitrogen Starvation—Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant by Blaby, Ian K., Glaesener, Anne G., Mettler, Tabea, Gibbon, Sorel T. Fitz, Gallaher, Sean D., Liu, Bensheng, Boyle, Nanette R., Kropat, Janette, Stitt, Mark, Johnson, Shannon, Benning, Christoph, Pellegrini, Matteo, Casero, David, Merchant, Sabeeha S.

“…To understand the molecular basis underlying increased triacylglycerol (TAG) accumulation in starchless (sta) Chlamydomonas reinhardtii mutants, we undertook…”
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Dynamic Changes in the Transcriptome and Methylome of Chlamydomonas reinhardtii throughout Its Life Cycle by Lopez, David, Hamaji, Takashi, Kropat, Janette, De Hoff, Peter, Morselli, Marco, Rubbi, Liudmilla, Fitz-Gibbon, Sorel, Gallaher, Sean D, Merchant, Sabeeha S, Umen, James, Pellegrini, Matteo

“…The green alga Chlamydomonas reinhardtii undergoes gametogenesis and mating upon nitrogen starvation. While the steps involved in its sexual reproductive cycle…”
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Iron rescues glucose-mediated photosynthesis repression during lipid accumulation in the green alga Chromochloris zofingiensis by Jeffers, Tim L., Purvine, Samuel O., Nicora, Carrie D., McCombs, Ryan, Upadhyaya, Shivani, Stroumza, Adrien, Whang, Ken, Gallaher, Sean D., Dohnalkova, Alice, Merchant, Sabeeha S., Lipton, Mary, Niyogi, Krishna K., Roth, Melissa S.

“…Energy status and nutrients regulate photosynthetic protein expression. The unicellular green alga Chromochloris zofingiensis switches off photosynthesis in…”
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Plant-Centered Diet and Risk of Incident Cardiovascular Disease During Young to Middle Adulthood by Choi, Yuni, Larson, Nicole, Steffen, Lyn M, Schreiner, Pamela J, Gallaher, Daniel D, Duprez, Daniel A, Shikany, James M, Rana, Jamal S, Jacobs, Jr, David R

“…Background The association between diets that focus on plant foods and restrict animal products and cardiovascular disease (CVD) is inconclusive. We…”
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Evaluation of Feeding Beta-Hydroxy-Beta-Methylbutyrate (HMB) to Mouse Dams during Gestation on Birth Weight and Growth Variation of Offspring by Clarke, Anna S, Faulk, Chris, Shurson, Gerald C, Gallaher, Daniel D, Johnston, Lee J

“…This study was designed to determine if feeding β-hydroxy-β-methylbutyrate (HMB) to pregnant mice would improve birth weight uniformity and growth performance…”
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Publisher Correction: An epigenetic gene silencing pathway selectively acting on transgenic DNA in the green alga Chlamydomonasis by Neupert, Juliane, Gallaher, Sean D., Lu, Yinghong, Strenkert, Daniela, Segal, Na’ama, Barahimipour, Rouhollah, Fitz-Gibbon, Sorel T., Schroda, Michael, Merchant, Sabeeha S., Bock, Ralph

“…A Correction to this paper has been published: https://doi.org/10.1038/s41467-020-20623-0…”
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Cholesterol reduction by glucomannan and chitosan is mediated by changes in cholesterol absorption and bile acid and fat excretion in rats by Gallaher, C M, Munion, J, Hesslink, Jr, R, Wise, J, Gallaher, D D

“…Glucomannan, a viscous polysaccharide, and chitosan, a derivative of chitin, have both been demonstrated to lower cholesterol in animals. However, the…”
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Simple Nutrient-Based Rules vs. a Nutritionally Rich Plant-Centered Diet in Prediction of Future Coronary Heart Disease and Stroke: Prospective Observational Study in the US by Choi, Yuni, Gallaher, Daniel D, Svendsen, Karianne, Meyer, Katie A, Steffen, Lyn M, Schreiner, Pamela J, Shikany, James M, Rana, Jamal S, Duprez, Daniel A, Jacobs, Jr, David R

“…To better understand nutrition paradigm shift from nutrients to foods and dietary patterns, we compared associations of a nutrient-based blood…”
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