Search Results - "GLEASNER, Cheryl"

A metagenomic viral discovery approach identifies potential zoonotic and novel mammalian viruses in Neoromicia bats within South Africa by Geldenhuys, Marike, Mortlock, Marinda, Weyer, Jacqueline, Bezuidt, Oliver, Seamark, Ernest C J, Kearney, Teresa, Gleasner, Cheryl, Erkkila, Tracy H, Cui, Helen, Markotter, Wanda

“…Species within the Neoromicia bat genus are abundant and widely distributed in Africa. It is common for these insectivorous bats to roost in anthropogenic…”
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The Addition of Transcriptomics to the Bead-Enabled Accelerated Monophasic Multi-Omics Method: A Step toward Universal Sample Preparation by Breidenbach, Joshua D., Rivera, Emilio S., Harvey, Tara, Mikolitis, Abigale S., Tseng, Chi Yen, Sanders, Claire K., Solomon, Emilia, Gleasner, Cheryl D., Thornhill, M. Grace, Luchini, Kes A., McBride, Ethan M., Blackwell, Brett R., LeBrun, Erick S., Mach, Phillip M., Glaros, Trevor G.

“…Omics-based measurements enable the study of biomolecules in a high-throughput fashion, leading to the characterization and quantification of biological…”
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Capturing single cell genomes of active polysaccharide degraders: an unexpected contribution of Verrucomicrobia by Martinez-Garcia, Manuel, Brazel, David M, Swan, Brandon K, Arnosti, Carol, Chain, Patrick S G, Reitenga, Krista G, Xie, Gary, Poulton, Nicole J, Lluesma Gomez, Monica, Masland, Dashiell E D, Thompson, Brian, Bellows, Wendy K, Ziervogel, Kai, Lo, Chien-Chi, Ahmed, Sanaa, Gleasner, Cheryl D, Detter, Chris J, Stepanauskas, Ramunas

“…Microbial hydrolysis of polysaccharides is critical to ecosystem functioning and is of great interest in diverse biotechnological applications, such as biofuel…”
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Forest floor community metatranscriptomes identify fungal and bacterial responses to N deposition in two maple forests by Hesse, Cedar N, Mueller, Rebecca C, Vuyisich, Momchilo, Gallegos-Graves, La Verne, Gleasner, Cheryl D, Zak, Donald R, Kuske, Cheryl R

“…Anthropogenic N deposition alters patterns of C and N cycling in temperate forests, where forest floor litter decomposition is a key process mediated by a…”
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Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing by Fischer, Will, Ganusov, Vitaly V, Giorgi, Elena E, Hraber, Peter T, Keele, Brandon F, Leitner, Thomas, Han, Cliff S, Gleasner, Cheryl D, Green, Lance, Lo, Chien-Chi, Nag, Ambarish, Wallstrom, Timothy C, Wang, Shuyi, McMichael, Andrew J, Haynes, Barton F, Hahn, Beatrice H, Perelson, Alan S, Borrow, Persephone, Shaw, George M, Bhattacharya, Tanmoy, Korber, Bette T

“…We used ultra-deep sequencing to obtain tens of thousands of HIV-1 sequences from regions targeted by CD8+ T lymphocytes from longitudinal samples from three…”
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Nonclassical autophagy activation pathways are essential for production of infectious Influenza A virus in vitro by Bell, Tisza A. S., Velappan, Nileena, Gleasner, Cheryl D., Xie, Gang, Starkenburg, Shawn R., Waldo, Geoffrey, Banerjee, Shounak, Micheva‐Viteva, Sofiya N.

“…Autophagy is a critical mechanism deployed by eukaryotic cells in response to stress, including viral infection, to boost the innate antimicrobial responses…”
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DISCOVR strain pipeline screening – Part I: Maximum specific growth rate as a function of temperature and salinity for 38 candidate microalgae for biofuels production by Huesemann, Michael, Edmundson, Scott, Gao, Song, Negi, Sangeeta, Dale, Taraka, Gutknecht, Andrew, Daligault, Hajnalka E., Carr, Carol K., Freeman, Jacob, Kern, Theresa, Starkenburg, Shawn R., Gleasner, Cheryl D., Louie, William, Kruk, Robert, McGuire, Sean

“…To identify high productivity strains for microalgal biofuels generation, the maximum specific growth rate of 38 strains was measured as a function of salinity…”
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Remedial Treatment of Corroded Iron Objects by Environmental Aeromonas Isolates by Kooli, Wafa M, Junier, Thomas, Shakya, Migun, Monachon, Mathilde, Davenport, Karen W, Vaideeswaran, Kaushik, Vernudachi, Alexandre, Marozau, Ivan, Monrouzeau, Teddy, Gleasner, Cheryl D, McMurry, Kim, Lienhard, Reto, Rufener, Lucien, Perret, Jean-Luc, Sereda, Olha, Chain, Patrick S, Joseph, Edith, Junier, Pilar

“…Using bacteria to transform reactive corrosion products into stable compounds represents an alternative to traditional methods employed in iron conservation…”
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Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2 by Ahmed, Sanaa A, Awosika, Joy, Baldwin, Carson, Bishop-Lilly, Kimberly A, Biswas, Biswajit, Broomall, Stacey, Chain, Patrick S G, Chertkov, Olga, Chokoshvili, Otar, Coyne, Susan, Davenport, Karen, Detter, J Chris, Dorman, William, Erkkila, Tracy H, Folster, Jason P, Frey, Kenneth G, George, Matroner, Gleasner, Cheryl, Henry, Matthew, Hill, Karen K, Hubbard, Kyle, Insalaco, Joseph, Johnson, Shannon, Kitzmiller, Aaron, Krepps, Michael, Lo, Chien-Chi, Luu, Truong, McNew, Lauren A, Minogue, Timothy, Munk, Christine A, Osborne, Brian, Patel, Mohit, Reitenga, Krista G, Rosenzweig, C Nicole, Shea, April, Shen, Xiaohong, Strockbine, Nancy, Tarr, Cheryl, Teshima, Hazuki, van Gieson, Eric, Verratti, Kathleen, Wolcott, Mark, Xie, Gary, Sozhamannan, Shanmuga, Gibbons, Henry S

“…In May of 2011, an enteroaggregative Escherichia coli O104:H4 strain that had acquired a Shiga toxin 2-converting phage caused a large outbreak of bloody…”
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California condor microbiomes: Bacterial variety and functional properties in captive-bred individuals by Jacobs, Lindsey, McMahon, Benjamin H, Berendzen, Joel, Longmire, Jonathan, Gleasner, Cheryl, Hengartner, Nicolas W, Vuyisich, Momchilo, Cohn, Judith R, Jenkins, Marti, Bartlow, Andrew W, Fair, Jeanne M

“…Around the world, scavenging birds such as vultures and condors have been experiencing drastic population declines. Scavenging birds have a distinct digestive…”
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Correction: California condor microbiomes: Bacterial variety and functional properties in captive-bred individuals by Jacobs, Lindsey, McMahon, Benjamin H, Berendzen, Joel, Longmire, Jonathan, Gleasner, Cheryl, Hengartner, Nicolas W, Vuyisich, Momchilo, Cohn, Judith D, Jenkins, Marti, Bartlow, Andrew W, Fair, Jeanne M

“…[This corrects the article DOI: 10.1371/journal.pone.0225858.]…”
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Comparing variability in diagnosis of upper respiratory tract infections in patients using syndromic, next generation sequencing, and PCR-based methods by Bartlow, Andrew W, Stromberg, Zachary R, Gleasner, Cheryl D, Hu, Bin, Davenport, Karen W, Jakhar, Shailja, Li, Po-E, Vosburg, Molly, Garimella, Madhavi, Chain, Patrick S G, Erkkila, Tracy H, Fair, Jeanne M, Mukundan, Harshini

“…Early and accurate diagnosis of respiratory pathogens and associated outbreaks can allow for the control of spread, epidemiological modeling, targeted…”
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A multiple-alignment based primer design algorithm for genetically highly variable DNA targets by Brodin, Johanna, Krishnamoorthy, Mohan, Athreya, Gayathri, Fischer, Will, Hraber, Peter, Gleasner, Cheryl, Green, Lance, Korber, Bette, Leitner, Thomas

“…Primer design for highly variable DNA sequences is difficult, and experimental success requires attention to many interacting constraints. The advent of…”
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The antibody mining toolbox: An open source tool for the rapid analysis of antibody repertoires by D'Angelo, Sara, Glanville, Jacob, Ferrara, Fortunato, Naranjo, Leslie, Gleasner, Cheryl D, Shen, Xiaohong, Bradbury, Andrew RM, Kiss, Csaba

“…In vitro selection has been an essential tool in the development of recombinant antibodies against various antigen targets. Deep sequencing has recently been…”
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Molecular Dissection of Induced Platinum Resistance through Functional and Gene Expression Analysis in a Cell Culture Model of Bladder Cancer by Wang, Sisi, Zhang, Hongyong, Scharadin, Tiffany M, Zimmermann, Maike, Hu, Bin, Pan, Amy Wang, Vinall, Ruth, Lin, Tzu-yin, Cimino, George, Chain, Patrick, Vuyisich, Momchilo, Gleasner, Cheryl, Mcmurry, Kim, Malfatti, Michael, Turteltaub, Kenneth, de Vere White, Ralph, Pan, Chong-xian, Henderson, Paul T

“…We report herein the development, functional and molecular characterization of an isogenic, paired bladder cancer cell culture model system for studying…”
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A Gene Cluster That Encodes Histone Deacetylase Inhibitors Contributes to Bacterial Persistence and Antibiotic Tolerance in Burkholderia thailandensis by Micheva-Viteva, Sofiya N, Shakya, Migun, Adikari, Samantha H, Gleasner, Cheryl D, Velappan, Nileena, Mourant, Judith R, Chain, Patrick S G, Hong-Geller, Elizabeth

“…Persister cells are genetically identical variants in a bacterial population that have phenotypically modified their physiology to survive environmental…”
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Epitope-Specific CD8+ T Lymphocytes Cross-Recognize Mutant Simian Immunodeficiency Virus (SIV) Sequences but Fail To Contain Very Early Evolution and Eventual Fixation of Epitope Escape Mutations during SIV Infection by CALE, Evan M, HRABER, Peter, KORBER, Bette, LETVIN, Norman L, GIORGI, Elena E, FISCHER, Will, BHATTACHARYA, Tanmoy, LEITNER, Thomas, YEH, Wendy W, GLEASNER, Cheryl, GREEN, Lance D, HAN, Cliff S

“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Genome Sequence of Aeribacillus pallidus Strain GS3372, an Endospore-Forming Bacterium Isolated in a Deep Geothermal Reservoir by Filippidou, Sevasti, Jaussi, Marion, Junier, Thomas, Wunderlin, Tina, Jeanneret, Nicole, Regenspurg, Simona, Li, Po-E, Lo, Chien-Chi, Johnson, Shannon, McMurry, Kim, Gleasner, Cheryl D, Vuyisich, Momchilo, Chain, Patrick S, Junier, Pilar

“…The genome of strain GS3372 is the first publicly available strain of Aeribacillus pallidus. This endospore-forming thermophilic strain was isolated from a…”
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Genome Sequence of a Chromium-Reducing Strain, Bacillus cereus S612 by Wang, Dongping, Boukhalfa, Hakim, Ware, Doug S, Reimus, Paul W, Daligault, Hajnalka E, Gleasner, Cheryl D, Johnson, Shannon L, Li, Po-E

“…We report here the genome sequence of an effective chromium-reducing bacterium, Bacillus cereus strain S612. The size of the draft genome sequence is…”
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Genome Sequence of Bacillus alveayuensis Strain 24KAM51, a Halotolerant Thermophile Isolated from a Hydrothermal Vent by Filippidou, Sevasti, Wunderlin, Tina, Junier, Thomas, Jeanneret, Nicole, Johnson, Shannon, McMurry, Kim, Gleasner, Cheryl D, Lo, Chien-Chi, Li, Po-E, Vuyisich, Momchilo, Chain, Patrick S, Junier, Pilar

“…Bacillus alveayuensis strain 24KAM51 was isolated from a marine hydrothermal vent in Milos, Greece. Its genome depicts interesting features of halotolerance…”
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