Search Results - "GILBERT, M. THOMAS P."

Skmer: assembly-free and alignment-free sample identification using genome skims by Sarmashghi, Shahab, Bohmann, Kristine, P Gilbert, M Thomas, Bafna, Vineet, Mirarab, Siavash

“…The ability to inexpensively describe taxonomic diversity is critical in this era of rapid climate and biodiversity changes. The recent genome-skimming…”
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Reconstructing ancient genomes and epigenomes by Orlando, Ludovic, Gilbert, M. Thomas P., Willerslev, Eske

“…Key Points High-throughput sequencing technologies have revolutionized ancient DNA (aDNA) research by enabling the reconstruction of whole-genome sequences…”
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Multiproxy evidence highlights a complex evolutionary legacy of maize in South America by Kistler, Logan, Maezumi, S Yoshi, Gregorio de Souza, Jonas, Przelomska, Natalia A S, Malaquias Costa, Flaviane, Smith, Oliver, Loiselle, Hope, Ramos-Madrigal, Jazmín, Wales, Nathan, Ribeiro, Eduardo Rivail, Morrison, Ryan R, Grimaldo, Claudia, Prous, Andre P, Arriaza, Bernardo, Gilbert, M Thomas P, de Oliveira Freitas, Fabio, Allaby, Robin G

“…Domesticated maize evolved from wild teosinte under human influences in Mexico beginning around 9000 years before the present (yr B.P.), traversed Central…”
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Monitoring endangered freshwater biodiversity using environmental DNA by THOMSEN, PHILIP FRANCIS, KIELGAST, JOS, IVERSEN, LARS L., WIUF, CARSTEN, RASMUSSEN, MORTEN, GILBERT, M. THOMAS P, ORLANDO, LUDOVIC, WILLERSLEV, ESKE

“…Freshwater ecosystems are among the most endangered habitats on Earth, with thousands of animal species known to be threatened or already extinct. Reliable…”
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Using paleo-archives to safeguard biodiversity under climate change by Fordham, Damien A, Jackson, Stephen T, Brown, Stuart C, Huntley, Brian, Brook, Barry W, Dahl-Jensen, Dorthe, Gilbert, M Thomas P, Otto-Bliesner, Bette L, Svensson, Anders, Theodoridis, Spyros, Wilmshurst, Janet M, Buettel, Jessie C, Canteri, Elisabetta, McDowell, Matthew, Orlando, Ludovic, Pilowsky, July A, Rahbek, Carsten, Nogues-Bravo, David

“…Strategies for 21st-century environmental management and conservation under global change require a strong understanding of the biological mechanisms that…”
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Investigating the potential use of environmental DNA (eDNA) for genetic monitoring of marine mammals by Foote, Andrew D, Thomsen, Philip Francis, Sveegaard, Signe, Wahlberg, Magnus, Kielgast, Jos, Kyhn, Line A, Salling, Andreas B, Galatius, Anders, Orlando, Ludovic, Gilbert, M Thomas P

“…The exploitation of non-invasive samples has been widely used in genetic monitoring of terrestrial species. In aquatic ecosystems, non-invasive samples such as…”
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mapDamage: testing for damage patterns in ancient DNA sequences by Ginolhac, Aurelien, Rasmussen, Morten, Gilbert, M. Thomas P., Willerslev, Eske, Orlando, Ludovic

“…Ancient DNA extracts consist of a mixture of contaminant DNA molecules, most often originating from environmental microbes, and endogenous fragments exhibiting…”
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Ancient and modern environmental DNA by Pedersen, Mikkel Winther, Overballe-Petersen, Søren, Ermini, Luca, Sarkissian, Clio Der, Haile, James, Hellstrom, Micaela, Spens, Johan, Thomsen, Philip Francis, Bohmann, Kristine, Cappellini, Enrico, Schnell, Ida Bærholm, Wales, Nathan A., Carøe, Christian, Campos, Paula F., Schmidt, Astrid M. Z., Gilbert, M. Thomas P., Hansen, Anders J., Orlando, Ludovic, Willerslev, Eske

“…DNA obtained from environmental samples such as sediments, ice or water (environmental DNA, eDNA), represents an important source of information on past and…”
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The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing by Binladen, Jonas, Gilbert, M Thomas P, Bollback, Jonathan P, Panitz, Frank, Bendixen, Christian, Nielsen, Rasmus, Willerslev, Eske

“…The invention of the Genome Sequence 20 DNA Sequencing System (454 parallel sequencing platform) has enabled the rapid and high-volume production of sequence…”
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Arctic-adapted dogs emerged at the Pleistocene-Holocene transition by Sinding, Mikkel-Holger S, Gopalakrishnan, Shyam, Ramos-Madrigal, Jazmín, de Manuel, Marc, Pitulko, Vladimir V, Kuderna, Lukas, Feuerborn, Tatiana R, Frantz, Laurent A F, Vieira, Filipe G, Niemann, Jonas, Samaniego Castruita, Jose A, Carøe, Christian, Andersen-Ranberg, Emilie U, Jordan, Peter D, Pavlova, Elena Y, Nikolskiy, Pavel A, Kasparov, Aleksei K, Ivanova, Varvara V, Willerslev, Eske, Skoglund, Pontus, Fredholm, Merete, Wennerberg, Sanne Eline, Heide-Jørgensen, Mads Peter, Dietz, Rune, Sonne, Christian, Meldgaard, Morten, Dalén, Love, Larson, Greger, Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, Lutz, Wiig, Øystein, Marques-Bonet, Tomas, Hansen, Anders J, Gilbert, M Thomas P

“…Although sled dogs are one of the most specialized groups of dogs, their origin and evolution has received much less attention than many other dog groups. We…”
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A Common Genetic Origin for Early Farmers from Mediterranean Cardial and Central European LBK Cultures by Olalde, Iñigo, Schroeder, Hannes, Sandoval-Velasco, Marcela, Vinner, Lasse, Lobón, Irene, Ramirez, Oscar, Civit, Sergi, García Borja, Pablo, Salazar-García, Domingo C, Talamo, Sahra, María Fullola, Josep, Xavier Oms, Francesc, Pedro, Mireia, Martínez, Pablo, Sanz, Montserrat, Daura, Joan, Zilhão, João, Marquès-Bonet, Tomàs, Gilbert, M Thomas P, Lalueza-Fox, Carles

“…The spread of farming out of the Balkans and into the rest of Europe followed two distinct routes: An initial expansion represented by the Impressa and Cardial…”
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Meta-barcoding of 'dirt' DNA from soil reflects vertebrate biodiversity by ANDERSEN, KENNETH, BIRD, KAREN LISE, RASMUSSEN, MORTEN, HAILE, JAMES, BREUNING-MADSEN, HENRIK, KJÆR, KURT H., ORLANDO, LUDOVIC, GILBERT, M. THOMAS P., WILLERSLEV, ESKE

“…DNA molecules originating from animals and plants can be retrieved directly from sediments and have been used for reconstructing both contemporary and past…”
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DNA extraction from dry museum beetles without conferring external morphological damage by Gilbert, M Thomas P, Moore, Wendy, Melchior, Linea, Worobey, Michael

“…A large number of dry-preserved insect specimens exist in collections around the world that might be useful for genetic analyses. However, until now, the…”
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DNA metabarcoding and spatial modelling link diet diversification with distribution homogeneity in European bats by Alberdi, Antton, Razgour, Orly, Aizpurua, Ostaizka, Novella-Fernandez, Roberto, Aihartza, Joxerra, Budinski, Ivana, Garin, Inazio, Ibáñez, Carlos, Izagirre, Eñaut, Rebelo, Hugo, Russo, Danilo, Vlaschenko, Anton, Zhelyazkova, Violeta, Zrnčić, Vida, Gilbert, M. Thomas P.

“…Inferences of the interactions between species’ ecological niches and spatial distribution have been historically based on simple metrics such as…”
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Plasmodium falciparum erythrocyte membrane protein 1 domain cassettes 8 and 13 are associated with severe malaria in children by Lavstsen, Thomas, Turner, Louise, Saguti, Fredy, Magistrado, Pamela, Rask, Thomas S, Jespersen, Jakob S, Wang, Christian W, Berger, Sanne S, Baraka, Vito, Marquard, Andrea M, Seguin-Orlando, Andaine, Willerslev, Eske, Gilbert, M. Thomas P, Lusingu, John, Theander, Thor G

“…The clinical outcome of Plasmodium falciparum infections ranges from asymptomatic parasitemia to severe malaria syndromes associated with high mortality. The…”
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Bone biodeterioration-The effect of marine and terrestrial depositional environments on early diagenesis and bone bacterial community by Eriksen, Anne Marie Høier, Nielsen, Tue Kjærgaard, Matthiesen, Henning, Carøe, Christian, Hansen, Lars Hestbjerg, Gregory, David John, Turner-Walker, Gordon, Collins, Matthew James, Gilbert, M Thomas P

“…Bacteria play an important role in the degradation of bone material. However, much remains to be learnt about the structure of their communities in degrading…”
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Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for All Living Bat Species by Teeling, Emma C, Vernes, Sonja C, Dávalos, Liliana M, Ray, David A, Gilbert, M. Thomas P, Myers, Eugene

“…Bats are unique among mammals, possessing some of the rarest mammalian adaptations, including true self-powered flight, laryngeal echolocation, exceptional…”
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Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution by Tanner, Alastair R., Fuchs, Dirk, Winkelmann, Inger E., Gilbert, M. Thomas P., Pankey, M. Sabrina, Ribeiro, Ângela M., Kocot, Kevin M., Halanych, Kenneth M., Oakley, Todd H., da Fonseca, Rute R., Pisani, Davide, Vinther, Jakob

“…Coleoid cephalopod molluscs comprise squid, cuttlefish and octopuses, and represent nearly the entire diversity of modern cephalopods. Sophisticated…”
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Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960 by Kabongo, Jean-Marie M, Kunstman, Kevin, Teuwen, Dirk E, Gilbert, M. Thomas P, Wolinsky, Steven M, Worobey, Michael, Gemmel, Marlea, Bunce, Michael, Kalengayi, Raphaël M, Muyembe, Jean-Jacques, Haselkorn, Tamara, Van Marck, Eric

“…Human immunodeficiency virus type 1 (HIV-1) sequences that pre-date the recognition of AIDS are critical to defining the time of origin and the timescale of…”
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The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when? by Gilbert, M Thomas P, Haselkorn, Tamara, Bunce, Michael, Sanchez, Juan J, Lucas, Sebastian B, Jewell, Laurence D, Van Marck, Eric, Worobey, Michael

“…Museums and pathology collections around the world represent an archive of genetic material to study populations and diseases. For preservation purposes, a…”
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