Search Results - "GARG, Rohini"
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Enhancers as potential targets for engineering salinity stress tolerance in crop plants
Published in Physiologia plantarum (01-12-2021)“…Enhancers represent noncoding regulatory regions of the genome located distantly from their target genes. They regulate gene expression programs in a…”
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Unravelling Differential DNA Methylation Patterns in Genotype Dependent Manner under Salinity Stress Response in Chickpea
Published in International journal of molecular sciences (18-01-2023)“…DNA methylation is one of the epigenetic mechanisms that govern gene regulation in response to abiotic stress in plants. Here, we analyzed the role of…”
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PLncPRO for prediction of long non-coding RNAs (lncRNAs) in plants and its application for discovery of abiotic stress-responsive lncRNAs in rice and chickpea
Published in Nucleic acids research (15-12-2017)“…Long non-coding RNAs (lncRNAs) make up a significant portion of non-coding RNAs and are involved in a variety of biological processes. Accurate…”
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Genome-wide analysis of homeobox gene family in legumes: identification, gene duplication and expression profiling
Published in PloS one (06-03-2015)“…Homeobox genes encode transcription factors that are known to play a major role in different aspects of plant growth and development. In the present study, we…”
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5
RNA-Seq for transcriptome analysis in non-model plants
Published in Methods in molecular biology (Clifton, N.J.) (01-01-2013)“…Sequencing of mRNA using next-generation sequencing (NGS) technologies (RNA-seq) has the potential to reveal unprecedented complexity of the transcriptomes…”
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A global view of transcriptome dynamics during flower development in chickpea by deep sequencing
Published in Plant biotechnology journal (01-08-2013)“…Measurement of gene expression can provide important clues about gene function and molecular basis of developmental processes. Here, we have analysed the…”
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Unravelling the molecular mechanism underlying drought stress response in chickpea via integrated multi-omics analysis
Published in Frontiers in plant science (23-05-2023)“…Drought stress affects growth and productivity significantly in chickpea. An integrated multi-omics analysis can provide a better molecular-level understanding…”
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A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.)
Published in The Plant journal : for cell and molecular biology (01-06-2013)“…Summary Cicer arietinum L. (chickpea) is the third most important food legume crop. We have generated the draft sequence of a desi‐type chickpea genome using…”
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9
Genomic survey, gene expression analysis and structural modeling suggest diverse roles of DNA methyltransferases in legumes
Published in PloS one (25-02-2014)“…DNA methylation plays a crucial role in development through inheritable gene silencing. Plants possess three types of DNA methyltransferases (MTases), namely…”
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10
DNA methylation reprogramming during seed development and its functional relevance in seed size/weight determination in chickpea
Published in Communications biology (03-07-2020)“…Seed development is orchestrated via complex gene regulatory networks and pathways. Epigenetic factors may also govern seed development and seed size/weight…”
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Genome-wide analysis of glutathione S-transferase gene family in chickpea suggests its role during seed development and abiotic stress
Published in Molecular biology reports (01-04-2020)“…Glutathione S-transferases (GSTs) are multifunctional proteins that help in oxidative stress metabolism and detoxification of xenobiotic compounds. Studies…”
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12
CTDB: An Integrated Chickpea Transcriptome Database for Functional and Applied Genomics
Published in PloS one (31-08-2015)“…Chickpea is an important grain legume used as a rich source of protein in human diet. The narrow genetic diversity and limited availability of genomic…”
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13
DNA: More Than Just a Genetic Material
Published in Resonance (01-09-2021)“…The article describes the non-genetic roles of DNA molecule and its applications in diagnostic and therapeutic fields such as in biosensors, barcodes,…”
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Deep transcriptome sequencing of wild halophyte rice, Porteresia coarctata, provides novel insights into the salinity and submergence tolerance factors
Published in DNA research (01-02-2014)“…Porteresia coarctata is a wild relative of rice with capability of high salinity and submergence tolerance. The transcriptome analyses of Porteresia can lead…”
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Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers
Published in PloS one (27-12-2012)“…Chickpea (Cicer arietinum L.) is an important crop legume plant with high nutritional value. The transcriptomes of desi and wild chickpea have already been…”
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Editorial: Abiotic stress: Molecular genetics and genomics, volume II
Published in Frontiers in plant science (18-01-2023)Get full text
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An integrated transcriptome mapping the regulatory network of coding and long non-coding RNAs provides a genomics resource in chickpea
Published in Communications biology (19-10-2022)“…Large-scale transcriptome analysis can provide a systems-level understanding of biological processes. To accelerate functional genomic studies in chickpea, we…”
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Genome‐wide profiling of miRNAs during seed development reveals their functional relevance in seed size/weight determination in chickpea
Published in Plant direct (01-03-2021)“…MicroRNAs (miRNAs) are non‐coding small RNAs that regulate gene expression at transcriptional and post‐transcriptional levels. The role of miRNAs in seed…”
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Microarray analysis reveals overlapping and specific transcriptional responses to different plant hormones in rice
Published in Plant signaling & behavior (01-08-2012)“…Hormones exert pleiotropic effects on plant growth and development throughout the life cycle. Many of these effects are mediated at molecular level via…”
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A Sustainable method for synthesis of silver nanoparticles by using Glycyrrhiza glabra extract
Published in Nanotechnology for environmental engineering (01-12-2021)“…The fabrication of nanoparticles by means of environmentally friendly methods is an expanding arena of nanotechnology. In last few years, the plant-mediated…”
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