Search Results - "Franke, Karl R"

Genomic surveillance of SARS-CoV-2 in the state of Delaware reveals tremendous genomic diversity by Franke, Karl R, Isett, Robert, Robbins, Alan, Paquette-Straub, Carrie, Shapiro, Craig A, Lee, Mary M, Crowgey, Erin L

“…The use of next generation sequencing is critical for the surveillance of severe acute respiratory syndrome coronavirus 2, SARS-CoV-2, transmission, as single…”
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Accelerating next generation sequencing data analysis: an evaluation of optimized best practices for Genome Analysis Toolkit algorithms by Franke, Karl R, Crowgey, Erin L

“…Advancements in next generation sequencing (NGS) technologies have significantly increased the translational use of genomics data in the medical field as well…”
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Impact of Early Feeding: Metagenomics Analysis of the Infant Gut Microbiome by Di Guglielmo, Matthew D, Franke, Karl R, Robbins, Alan, Crowgey, Erin L

“…Different feeding regimens in infancy alter the gastrointestinal (gut) microbial environment. The fecal microbiota in turn influences gastrointestinal…”
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Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops by Franke, Karl R, Schmidt, Skye A, Park, Sunhee, Jeong, Dong-Hoon, Accerbi, Monica, Green, Pamela J

“…Since the proposal of Brachypodium distachyon as a model for the grasses, over 500 Bdi-miRNAs have been annotated in miRBase making Brachypodium second in…”
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Accelerating next generation sequencing data analysis: an evaluation of optimized best practices for Genome Analysis Toolkit algorithms by Franke, Karl R, Crowgey, Erin L

“…Advancements in next generation sequencing (NGS) technologies have significantly increased the translational use of genomics data in the medical field as well…”
Get full text

Machine learning classifier approaches for predicting response to RTK-type-III inhibitors demonstrate high accuracy using transcriptomic signatures and ex vivo data by Ferrato, Mauricio H, Marsh, Adam G, Franke, Karl R, Huang, Benjamin J, Kolb, E Anders, DeRyckere, Deborah, Grahm, Douglas K, Chandrasekaran, Sunita, Crowgey, Erin L

“…Abstract Motivation The application of machine learning (ML) techniques in the medical field has demonstrated both successes and challenges in the precision…”
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Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops by Franke, Karl R., Schmidt, Skye A., Park, Sunhee, Jeong, Dong -Hoon, Accerbi, Monica, Green, Pamela J.

“…Since the proposal of Brachypodium distachyon as a model for the grasses, over 500 Bdi-miRNAs have been annotated in miRBase making Brachypodium second in…”
Get full text

Genomic surveillance of SARS-CoV-2 in the state of Delaware reveals tremendous genomic diversity by Karl R Franke, Robert Isett, Alan Robbins, Carrie Paquette-Straub, Craig A Shapiro, Mary M Lee, Erin L Crowgey

“…The use of next generation sequencing is critical for the surveillance of severe acute respiratory syndrome coronavirus 2, SARS-CoV-2, transmission, as single…”
Get full text