Search Results - "Forster, Dominik"

Supervised machine learning outperforms taxonomy‐based environmental DNA metabarcoding applied to biomonitoring by Cordier, Tristan, Forster, Dominik, Dufresne, Yoann, Martins, Catarina I. M., Stoeck, Thorsten, Pawlowski, Jan

“…Biodiversity monitoring is the standard for environmental impact assessment of anthropogenic activities. Several recent studies showed that high‐throughput…”
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Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing by Massana, Ramon, Gobet, Angélique, Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Chambouvet, Aurélie, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Dolan, John R., Dunthorn, Micah, Edvardsen, Bente, Forn, Irene, Forster, Dominik, Guillou, Laure, Jaillon, Olivier, Kooistra, Wiebe H. C. F., Logares, Ramiro, Mahé, Frédéric, Not, Fabrice, Ogata, Hiroyuki, Pawlowski, Jan, Pernice, Massimo C., Probert, Ian, Romac, Sarah, Richards, Thomas, Santini, Sébastien, Shalchian-Tabrizi, Kamran, Siano, Raffaele, Simon, Nathalie, Stoeck, Thorsten, Vaulot, Daniel, Zingone, Adriana, de Vargas, Colomban

“…Summary Although protists are critical components of marine ecosystems, they are still poorly characterized. Here we analysed the taxonomic diversity of…”
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Environmental DNA metabarcoding of benthic bacterial communities indicates the benthic footprint of salmon aquaculture by Stoeck, Thorsten, Frühe, Larissa, Forster, Dominik, Cordier, Tristan, Martins, Catarina I.M., Pawlowski, Jan

“…We evaluated benthic bacterial communities as bioindicators in environmental impact assessments of salmon aquaculture, a rapidly growing sector of seafood…”
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Seasonality of Planktonic Freshwater Ciliates: Are Analyses Based on V9 Regions of the 18S rRNA Gene Correlated With Morphospecies Counts? by Pitsch, Gianna, Bruni, Estelle Patricia, Forster, Dominik, Qu, Zhishuai, Sonntag, Bettina, Stoeck, Thorsten, Posch, Thomas

“…Ciliates represent central nodes in freshwater planktonic food webs, and many species show pronounced seasonality, with short-lived maxima of a few dominant…”
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An integrative approach sheds new light onto the systematics and ecology of the widespread ciliate genus Coleps (Ciliophora, Prostomatea) by Pröschold, Thomas, Rieser, Daniel, Darienko, Tatyana, Nachbaur, Laura, Kammerlander, Barbara, Qian, Kuimei, Pitsch, Gianna, Bruni, Estelle Patricia, Qu, Zhishuai, Forster, Dominik, Rad-Menendez, Cecilia, Posch, Thomas, Stoeck, Thorsten, Sonntag, Bettina

“…Species of the genus Coleps are one of the most common planktonic ciliates in lake ecosystems. The study aimed to identify the phenotypic plasticity and…”
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A Comparison of Different Ciliate Metabarcode Genes as Bioindicators for Environmental Impact Assessments of Salmon Aquaculture by Forster, Dominik, Filker, Sabine, Kochems, Rebecca, Breiner, Hans‐Werner, Cordier, Tristan, Pawlowski, Jan, Stoeck, Thorsten

“…Ciliates are powerful indicators for monitoring the impact of aquaculture and other industrial activities in the marine environment. Here, we tested the…”
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Diatom diversity through HTS-metabarcoding in coastal European seas by Piredda, Roberta, Claverie, Jean-Michel, Decelle, Johan, de Vargas, Colomban, Dunthorn, Micah, Edvardsen, Bente, Eikrem, Wenche, Forster, Dominik, Kooistra, Wiebe H. C. F., Logares, Ramiro, Massana, Ramon, Montresor, Marina, Not, Fabrice, Ogata, Hiroyuki, Pawlowski, Jan, Romac, Sarah, Sarno, Diana, Stoeck, Thorsten, Zingone, Adriana

“…Diatoms constitute a diverse lineage of unicellular organisms abundant and ecologically important in aquatic ecosystems. Compared to other protists, their…”
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Benthic protists: the under-charted majority by Forster, Dominik, Dunthorn, Micah, Mahé, Fréderic, Dolan, John R., Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Edvardsen, Bente, Egge, Elianne, Eikrem, Wenche, Gobet, Angélique, Kooistra, Wiebe H.C.F., Logares, Ramiro, Massana, Ramon, Montresor, Marina, Not, Fabrice, Ogata, Hiroyuki, Pawlowski, Jan, Pernice, Massimo C., Romac, Sarah, Shalchian-Tabrizi, Kamran, Simon, Nathalie, Richards, Thomas A., Santini, Sébastien, Sarno, Diana, Siano, Raffaele, Vaulot, Daniel, Wincker, Patrick, Zingone, Adriana, de Vargas, Colomban, Stoeck, Thorsten

“…Marine protist diversity inventories have largely focused on planktonic environments, while benthic protists have received relatively little attention. We…”
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Assessing Biotic and Abiotic Interactions of Microorganisms in Amazonia through Co-Occurrence Networks and DNA Metabarcoding by Ritter, Camila Duarte, Forster, Dominik, Azevedo, Josue A. R., Antonelli, Alexandre, Nilsson, R. Henrik, Trujillo, Martha E., Dunthorn, Micah

“…Species may co-occur due to responses to similar environmental conditions, biological associations, or simply because of coincident geographical distributions…”
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Global Trends of Benthic Bacterial Diversity and Community Composition Along Organic Enrichment Gradients of Salmon Farms by Frühe, Larissa, Dully, Verena, Forster, Dominik, Keeley, Nigel B, Laroche, Olivier, Pochon, Xavier, Robinson, Shawn, Wilding, Thomas A, Stoeck, Thorsten

“…The analysis of benthic bacterial community structure has emerged as a powerful alternative to traditional microscopy-based taxonomic approaches to monitor…”
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Spatial and Annual Variation in Microbial Abundance, Community Composition, and Diversity Associated With Alpine Surface Snow by Fillinger, Lucas, Hürkamp, Kerstin, Stumpp, Christine, Weber, Nina, Forster, Dominik, Hausmann, Bela, Schultz, Lotta, Griebler, Christian

“…Understanding microbial community dynamics in the alpine cryosphere is an important step toward assessing climate change impacts on these fragile ecosystems…”
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Obstetric Ultrasonography to Detect Fetal Abnormalities in a Mouse Model for Zika Virus Infection by Forster, Dominik, Schwarz, Jan Hendrik, Brosinski, Katrin, Kalinke, Ulrich, Sutter, Gerd, Volz, Asisa

“…In 2015 Zika virus (ZIKV) emerged for the first time in South America. The following ZIKV epidemic resulted in the appearance of a clinical phenotype with…”
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Comparison of three clustering approaches for detecting novel environmental microbial diversity by Forster, Dominik, Dunthorn, Micah, Stoeck, Thorsten, Mahé, Frédéric

“…Discovery of novel diversity in high-throughput sequencing studies is an important aspect in environmental microbial ecology. To evaluate the effects that…”
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Genetic Diversity in Marine Planktonic Ciliates (Alveolata, Ciliophora) Suggests Distinct Geographical Patterns – Data From Chinese and European Coastal Waters by Ganser, Maximilian H., Forster, Dominik, Liu, Weiwei, Lin, Xiaofeng, Stoeck, Thorsten, Agatha, Sabine

“…Unraveling geographic distribution patterns of planktonic protists is a central goal in marine microbial ecology. Using a novel combination of recently…”
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Lake Ecosystem Robustness and Resilience Inferred from a Climate-Stressed Protistan Plankton Network by Forster, Dominik, Qu, Zhishuai, Pitsch, Gianna, Bruni, Estelle P, Kammerlander, Barbara, Pröschold, Thomas, Sonntag, Bettina, Posch, Thomas, Stoeck, Thorsten

“…Network analyses of biological communities allow for identifying potential consequences of climate change on the resilience of ecosystems and their robustness…”
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Asymmetric Synthesis of β-Nitro Ketones via Michael Addition of Lithiated α-Amino Nitriles to Nitroalkenes by Enders, Dieter, Förster, Dominik, Raabe, Gerhard, Bats, Jan W

“…α-Amino nitriles, easily prepared from aldehydes, KCN, and an enantiopure secondary amine auxiliary, are metalated and used as nucleophiles in asymmetric…”
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Metabarcoding of benthic ciliate communities shows high potential for environmental monitoring in salmon aquaculture by Stoeck, Thorsten, Kochems, Rebecca, Forster, Dominik, Lejzerowicz, Franck, Pawlowski, Jan

“…The backbone of benthic marine monitoring programs is the biological component, traditionally the macrofauna inventory. Such macrofauna-based environmental…”
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Factors shaping community patterns of protists and bacteria on a European scale by Bock, Christina, Jensen, Manfred, Forster, Dominik, Marks, Sabina, Nuy, Julia, Psenner, Roland, Beisser, Daniela, Boenigk, Jens

“…Summary Factors shaping community patterns of microorganisms are controversially discussed. Physical and chemical factors certainly limit the survival of…”
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Improving eDNA‐based protist diversity assessments using networks of amplicon sequence variants by Forster, Dominik, Lentendu, Guillaume, Filker, Sabine, Dubois, Elyssa, Wilding, Thomas A., Stoeck, Thorsten

“…Summary Effective and precise grouping of highly similar sequences remains a major bottleneck in the evaluation of high‐throughput sequencing datasets…”
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Environmental status assessment using biological traits analyses and functional diversity indices of benthic ciliate communities by Xu, Yuan, Stoeck, Thorsten, Forster, Dominik, Ma, Zuhang, Zhang, Liquan, Fan, Xinpeng

“…In this study, we tested the hypothesis that the functional diversity of benthic ciliates has high potential to monitor marine ecological status. Therefore, we…”
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