Chemical and genetic characterization of lipopeptides from Bacillus velezensis and Paenibacillus ottowii with activity against Fusarium verticillioides

The fungus significantly threatens maize crops in tropical soils. In light of this, biological control has emerged as a promising strategy to reduce fungicide costs and environmental risks. In this study, we aimed to test the antifungal activity of cell-free supernatant (CFS) from three (CT02, IM14,...

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Published in:Frontiers in microbiology Vol. 15; p. 1443327
Main Authors: Diniz, Gisele de Fátima Dias, Figueiredo, José Edson Fontes, Canuto, Kirley Marques, Cota, Luciano Viana, Souza, Ana Sheila de Queiroz, Simeone, Maria Lúcia Ferreira, Tinoco, Sylvia Morais de Sousa, Ribeiro, Paulo Riceli Vasconcelos, Ferreira, Lourenço Vitor Silva, Marins, Mikaely Sousa, de Oliveira-Paiva, Christiane Abreu, Dos Santos, Vera Lúcia
Format: Journal Article
Language:English
Published: Switzerland Frontiers Media S.A 26-08-2024
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Summary:The fungus significantly threatens maize crops in tropical soils. In light of this, biological control has emerged as a promising strategy to reduce fungicide costs and environmental risks. In this study, we aimed to test the antifungal activity of cell-free supernatant (CFS) from three (CT02, IM14, and LIS05) and one (LIS04) against , thereby contributing to the development of effective biocontrol measures. The research employed a comprehensive approach. The antifungal activity of the bacterial strains was tested using cell-free supernatant (CFS) from three (CT02, IM14, and LIS05) and one (LIS04). The UPLC-MS evaluated the CFS to identify the main bioactive molecules involved in the inhibitory effect on . . Scanning electron microscopy (SEM) was used to assess the impact of CFS on spores and hyphae, and genome sequencing was conducted to identify the genes involved in biological control. These robust methodologies ensure the reliability and validate our findings. The CFS of the four strains demonstrated significant inhibition of fungal growth. The UPLC-MS analysis revealed the presence of lipopeptides with antifungal activity, including surfactin and fengycins A and B expressed by the three strains of and iturin A expressed by strains LIS05 and IM14. For , fusaricidins, ABCDE, and five previously unreported lipopeptides were detected. Scanning electron microscopy (SEM) showed that treatments with CFS led to significant distortion and breakage of the . hyphae, in addition to the formation of cavities in the membrane. Genome mining confirmed the presence of genes coding for the lipopeptides identified by UPLC-MS, including the gene for iturin in CTO2. Genomic sequencing revealed that CT02, IM14, and LIS05 belong to different strains of , and LIS04 belongs to , a species recently described. The four bacterial strains, including three novel strains identified as and one as the recently described species , demonstrate significant potential as biocontrol agents for managing fungal disease. This finding underscores the novelty and potential impact of our research.
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Vera Lúcia dos Santos orcid.org/0000-0001-5815-5652
José Edson Fontes Figueiredo orcid.org/0000-0002-9542-2315
Kirley Marques Canuto orcid.org/0000-0003-3194-6125
ORCID: Gisele de Fátima Dias Diniz orcid.org/0000-0001-7018-6574
Christiane Abreu de Oliveira-Paiva orcid.org/0000-0002-1874-2489
Ana Sheila de Queiroz Souza orcid.org/0000-0002-1536-6588
Maria Lúcia Ferreira Simeone orcid.org/0000-0002-2003-0341
Sylvia Morais de Sousa Tinoco orcid.org/0000-0002-8030-1385
Reviewed by: Ravindra Soni, Indira Gandhi Krishi Vishva Vidyalaya, India
Mehi Lal, ICAR-Central Potato Research Institute, India
Mikaely Sousa Marins orcid.org/0000-0002-3508-8204
Luciano Viana Cota orcid.org/0000-0003-4216-7610
Paulo Riceli Vasconcelos Ribeiro orcid.org/0000-0002-5258-4015
Edited by: Vinay Kumar, ICAR-National Institute of Biotic Stress Management, India
Lourenço Vitor Silva Ferreira orcid.org/0009-0003-8797-5213
ISSN:1664-302X
1664-302X
DOI:10.3389/fmicb.2024.1443327