Search Results - "Felsenfeld, Gary"
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CTCF: making the right connections
Published in Genes & development (15-04-2016)“…The role of the zinc finger protein CTCF in organizing the genome within the nucleus is now well established. Widely separated sites on DNA, occupied by both…”
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Nucleosome stability mediated by histone variants H3.3 and H2A.Z
Published in Genes & development (15-06-2007)“…Nucleosomes containing the histone variant H3.3 tend to be clustered in vivo in the neighborhood of transcriptionally active genes and over regulatory…”
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Insulators: exploiting transcriptional and epigenetic mechanisms
Published in Nature reviews. Genetics (01-09-2006)“…Insulators are DNA sequence elements that prevent inappropriate interactions between adjacent chromatin domains. One type of insulator establishes domains that…”
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Large parental differences in chromatin organization in pancreatic beta cell line explaining diabetes susceptibility effects
Published in Nature communications (15-07-2021)“…Previous GWAS studies identified non-coding loci with parent-of-origin-specific effects on Type 2 diabetes susceptibility. Here we report the molecular basis…”
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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
Published in Nature genetics (01-08-2009)“…To understand how chromatin structure is organized by different histone variants, we have measured the genome-wide distribution of nucleosome core particles…”
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Specific Sites in the C Terminus of CTCF Interact with the SA2 Subunit of the Cohesin Complex and Are Required for Cohesin-Dependent Insulation Activity
Published in Molecular and Cellular Biology (01-06-2011)“…Article Usage Stats Services MCB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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We gather together: insulators and genome organization
Published in Current opinion in genetics & development (01-10-2007)“…When placed between an enhancer and promoter, certain DNA sequence elements inhibit enhancer-stimulated gene expression. The best characterized of these…”
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Association of the Long Non-coding RNA Steroid Receptor RNA Activator (SRA) with TrxG and PRC2 Complexes
Published in PLoS genetics (01-10-2015)“…Long non-coding RNAs (lncRNAs) have been recognized as key players in transcriptional regulation. We show that the lncRNA steroid receptor RNA activator (SRA)…”
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Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA
Published in Genes & development (15-11-2010)“…CCCTC-binding factor (CTCF) is a DNA-binding protein that plays important roles in chromatin organization, although the mechanism by which CTCF carries out…”
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Interactome mapping defines BRG1, a component of the SWI/SNF chromatin remodeling complex, as a new partner of the transcriptional regulator CTCF
Published in The Journal of biological chemistry (18-01-2019)“…The highly conserved zinc finger CCCTC-binding factor (CTCF) regulates genomic imprinting and gene expression by acting as a transcriptional activator or…”
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human insulin gene is part of a large open chromatin domain specific for human islets
Published in Proceedings of the National Academy of Sciences - PNAS (13-10-2009)“…Knowledge of how insulin (INS) gene expression is regulated will lead to better understanding of normal and abnormal pancreatic β cell function. We have mapped…”
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Silencing of transgene transcription precedes methylation of promoter DNA and histone H3 lysine 9
Published in The EMBO journal (14-01-2004)“…Transgenes stably integrated into cells or animals in many cases are silenced rapidly, probably under the influence of surrounding endogenous condensed…”
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Chromatin domains, insulators, and the regulation of gene expression
Published in Biochimica et biophysica acta (01-07-2012)“…The DNA sequence elements called insulators have two basic kinds of properties. Barrier elements block the propagation of heterochromatic structures into…”
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Chromatin as an essential part of the transcriptional mechanim
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Methylation of histone H4 by arginine methyltransferase PRMT1 is essential in vivo for many subsequent histone modifications
Published in Genes & development (15-08-2005)“…PRMT1 is a histone methyltransferase that methylates Arg3 on histone H4. When we used siRNA to knock down PRMT1 in an erythroid cell line, it resulted in…”
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CTCF Recruits Centromeric Protein CENP-E to the Pericentromeric/Centromeric Regions of Chromosomes through Unusual CTCF-Binding Sites
Published in Cell reports (Cambridge) (08-09-2015)“…The role of CTCF in stabilizing long-range interactions between chromatin sites essential for maintaining nuclear architecture is well established. Most of…”
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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene
Published in Nature (London) (25-05-2000)“…The expression of the insulin-like growth factor 2 (Igf2) and H19 genes is imprinted. Although these neighbouring genes share an enhancer, H19 is expressed…”
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Chromatin structure outside and inside the nucleus
Published in Biopolymers (01-04-2013)“…The structure of the 30‐nm chromatin fiber has provided, over the years, an important reference in chromatin studies. Originally derived from electron…”
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Mapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription
Published in Nature structural & molecular biology (01-03-2011)“…Insulin secretion from pancreatic b cells is tightly regulated. Using chromosome conformation capture techniques, it is now found that the insulin promoter…”
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Insulators: many functions, many mechanisms
Published in Genes & development (01-02-2002)“…"Insulator" is the name given to a class of DNA sequence elements that possess a common ability to protect genes from inappropriate signals emanating from…”
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