Search Results - "Farasat, Alireza"
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Calprotectin (S100A8/S100A9): a key protein between inflammation and cancer
Published in Inflammation research (01-10-2018)“…Background Calprotectin (S100A8/S100A9), a heterodimeric EF-hand Ca 2+ binding protein, are abundant in cytosol of neutrophils and are involved in…”
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In silico assessment of human Calprotectin subunits (S100A8/A9) in presence of sodium and calcium ions using Molecular Dynamics simulation approach
Published in PloS one (17-10-2019)“…Calprotectin is a heterodimeric protein complex which consists of two subunits including S100A8 and S100A9. This protein has a major role in different…”
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Effects of unsaturated fatty acids (Arachidonic/Oleic Acids) on stability and structural properties of Calprotectin using molecular docking and molecular dynamics simulation approach
Published in PloS one (26-03-2020)“…Calprotectin is a heterodimeric protein complex with two subunits called S100A8/A9. The protein has an essential role in inflammation process and various human…”
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The effects of the esterified Quercetin with omega3 and omega6 fatty acids on viability, nanomechanical properties, and BAX/BCL-2 gene expression in MCF-7 cells
Published in Molecular biology reports (01-06-2021)“…Quercetin is one of the major flavonoids and it appears to have cytotoxic effects on various cancer cells through regulating the apoptosis pathway genes such…”
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Activation of apoptosis and G0/G1 cell cycle arrest along with inhibition of melanogenesis by humic acid and fulvic acid: BAX/BCL -2 and Tyr genes expression and evaluation of nanomechanical properties in A375 human melanoma cell line
Published in Iranian journal of basic medical sciences (01-04-2022)“…Humic acid (HA) and Fulvic acid (FA) are major members of humic substances, which are extracted from organic sources including soil and peat. The pro-apoptotic…”
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Identification of Anti-HIV/Migraine Drugs as Potential Inhibitors of SARS-Cov2 Main Protease Using in Silico Assessments
Published in Majallah-i dānishgāh-i ʻulūm-i pizishkī-i Qazvīn (01-10-2022)“…Background: The acute respiratory syndrome named “COVID-19” is caused by a novel coronavirus called Severe Acute Respiratory Syndrome Coronavirus 2…”
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Finding epitopes of Klebsiella pneumoniae outer membrane protein-K17 (OMPK17) and introducing a 25-mer peptide of it as a vaccine candidate
Published in Biológia (14-03-2023)“…No approved vaccine exists for Klebsiella pneumoniae yet. Outer membrane protein-K17 (OMPK17) is involved in K. pneumoniae pathogenesis. No information has…”
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ACE2-Inhibitory Effects of Bromelain and Ficin in Colon Cancer Cells
Published in Medicina (Kaunas, Lithuania) (01-02-2023)“…: Bromelain and ficin are aqueous extracts from fruits of and plants, used widely for medical applications. Angiotensin-converting enzyme 2 (ACE2) is a homolog…”
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In silico assessment of the inhibitory effect of four flavonoids (Chrysin, Naringin, Quercetin, Kaempferol) on tyrosinase activity using the MD simulation approach
Published in Biotechnologia (Poznan) (2020)“…Tyrosinase is a tetrameric enzyme that plays an important role in pigment production. Overproduction of melanin, which may lead to several skin disorders, is a…”
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A Comprehensive Study of Human Serum Albumin Interaction With Trimethoprim Using Molecular Docking and Molecular Dynamics Methods: An Appropriate Tool for Drug Delivery Systems
Published in Majallah-i dānishgāh-i ʻulūm-i pizishkī-i Qazvīn (01-09-2021)“…Background: Human Serum Albumin (HSA) is one of the most prominent proteins in human blood. Trimethoprim (TMP) is an efficient antibiotic drug for treating…”
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Thermodynamic, kinetic and docking studies of some unsaturated fatty acids-quercetin derivatives as inhibitors of mushroom tyrosinase
Published in AIMS biophysics (01-10-2020)“…Inhibition of activity and stability structure of mushroom tyrosinase (MT) is highly important, since it is a key enzyme of melanogenesis playing various roles…”
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Study of jack bean urease interaction with luteolin by the extended solvation model and docking simulation
Published in AIMS biophysics (01-01-2020)“…In this study, the interaction between Luteolin and urease was made at 300 K in aqueous buffer solutions using isothermal titration calorimetry. The extended…”
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Affinity enhancement of CR3022 binding to RBD; in silico site directed mutagenesis using molecular dynamics simulation approaches
Published in Journal of biomolecular structure & dynamics (02-01-2023)“…Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a disease which caused by a novel beta coronavirus. Structural and non-structural proteins are…”
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Enfuvirtide, an HIV-1 fusion inhibitor peptide, can act as a potent SARS-CoV-2 fusion inhibitor: an in silico drug repurposing study
Published in Journal of biomolecular structure & dynamics (14-07-2022)“…Regarding the urgency of therapeutic measures for coronavirus disease 2019 (COVID-19) pandemic, the use of available drugs with FDA approval is preferred…”
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A comprehensive review on methotrexate containing nanoparticles; an appropriate tool for cancer treatment
Published in Molecular biology reports (01-11-2022)“…For more than seven decades, methotrexate has been used all over the world for treatment of different diseases such as: cancer, autoimmune diseases, and…”
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A nano-liposomal carrier containing p-coumaric acid for induction of targeted apoptosis on melanoma cells and kinetic modeling
Published in Biochemical and biophysical research communications (01-01-2024)“…There has been a growth in the use of plant compounds as biological products for the prevention and treatment of various diseases, including cancer. As a…”
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Identification of HLA-I restricted epitopes in six vaccine candidates of Leishmania tropica using immunoinformatics and molecular dynamics simulation approaches
Published in Infection, genetics and evolution (01-11-2019)“…In spite of numerous studies on vaccination for various species of Leishmania, research on the development of an effective vaccine for L. tropica is very…”
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Social structure optimization in team formation
Published in Computers & operations research (01-10-2016)“…This paper presents a mathematical framework for treating the Team Formation Problem explicitly incorporating Social Structure (TFP-SS), the formulation of…”
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Immunoinformatics and molecular dynamics studies to predict T-cell-specific epitopes of four Klebsiella pneumoniae fimbriae antigens
Published in Journal of biomolecular structure & dynamics (2022)“…Klebsiella pneumoniae (K. pneumoniae) is a causative agent of severe infections in humans. There is no publically available vaccine for K. pneumoniae…”
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Anticancer Properties of Probiotic Saccharomyces boulardii Supernatant on Human Breast Cancer Cells
Published in Probiotics and antimicrobial proteins (01-12-2022)“…Saccharomyces boulardii , a variety of S. cerevisiae , is used as a probiotic yeast in food and drug industries. However, S. boulardii is an opportunistic…”
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