Search Results - "Fan, Xiaoying"
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Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos
Published in Genome Biology (23-07-2015)“…Circular RNAs (circRNAs) are a new class of non-polyadenylated non-coding RNAs that may play important roles in many biological processes. Here we develop a…”
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A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex
Published in Nature (London) (22-03-2018)“…WebAnalysis of gene expression at single-cell resolution in the developing prefrontal cortex of the human embryo reveals a diversity of cell types, elucidates…”
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3
Single-cell RNA-seq analysis reveals the progression of human osteoarthritis
Published in Annals of the rheumatic diseases (01-01-2019)“…Understanding the molecular mechanisms underlying human cartilage degeneration and regeneration is helpful for improving therapeutic strategies for treating…”
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4
Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart
Published in Cell reports (Cambridge) (12-02-2019)“…The heart is the central organ of the circulatory system, and its proper development is vital for maintaining human life. Here, we used single-cell RNA…”
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Single-cell RNA-seq reveals the diversity of trophoblast subtypes and patterns of differentiation in the human placenta
Published in Cell research (01-08-2018)“…The placenta is crucial for a successful pregnancy and the health of both the fetus and the pregnant woman. However, how the human trophoblast lineage is…”
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Review of Metabolomics-Based Biomarker Research for Parkinson’s Disease
Published in Molecular neurobiology (01-02-2022)“…Parkinson’s disease (PD), as the second most common neurodegenerative disease, is seriously affecting the life quality of the elderly. However, there is still…”
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SMOOTH-seq: single-cell genome sequencing of human cells on a third-generation sequencing platform
Published in Genome Biology (30-06-2021)“…There is no effective way to detect structure variations (SVs) and extra-chromosomal circular DNAs (ecDNAs) at single-cell whole-genome level. Here, we develop…”
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Decoding the development of the human hippocampus
Published in Nature (London) (23-01-2020)“…The hippocampus is an important part of the limbic system in the human brain that has essential roles in spatial navigation and the consolidation of…”
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DNA methylation and chromatin accessibility profiling of mouse and human fetal germ cells
Published in Cell research (01-02-2017)“…Chromatin remodeling is important for the epigenetic reprogramming of human primordial germ cells. However, the comprehensive chromatin state has not yet been…”
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Spatial transcriptomic survey of human embryonic cerebral cortex by single-cell RNA-seq analysis
Published in Cell research (01-07-2018)“…The cellular complexity of human brain development has been intensively investigated, although a regional characterization of the entire human cerebral cortex…”
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11
Single-Cell RNA-Seq Analysis Maps Development of Human Germline Cells and Gonadal Niche Interactions
Published in Cell stem cell (01-06-2017)“…Human fetal germ cells (FGCs) are precursors to sperm and eggs and are crucial for maintenance of the species. However, the developmental trajectories and…”
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The DNA methylation landscape of human early embryos
Published in Nature (London) (31-07-2014)“…Base-resolution maps of DNA methylation in human gametes and early embryos offer novel insights into human methylation dynamics and the functional relationship…”
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Correction of a genetic disease by CRISPR-Cas9-mediated gene editing in mouse spermatogonial stem cells
Published in Cell research (01-01-2015)“…Spermatogonial stem cells (SSCs) can produce numerous male gametes after transplantation into recipient testes, presenting a valuable approach for gene therapy…”
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14
Single-cell multi-omics sequencing and its applications in studying the nervous system
Published in Biophysics reports (30-06-2022)“…Single-cell sequencing has become one of the most powerful and popular techniques in dissecting molecular heterogeneity and modeling the cellular architecture…”
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Embryonic endothelial evolution towards first hematopoietic stem cells revealed by single-cell transcriptomic and functional analyses
Published in Cell research (01-05-2020)“…Hematopoietic stem cells (HSCs) in adults are believed to be born from hemogenic endothelial cells (HECs) in mid-gestational embryos. Due to the rare and…”
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Categorizing Extrachromosomal Circular DNA as Biomarkers in Serum of Cancer
Published in Biomolecules (Basel, Switzerland) (01-04-2024)“…Extrachromosomal circular DNA (eccDNA), a double-stranded circular DNA molecule found in multiple organisms, has garnered an increasing amount of attention in…”
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Single-cell RNA-seq analysis of mouse preimplantation embryos by third-generation sequencing
Published in PLoS biology (30-12-2020)“…The development of next generation sequencing (NGS) platform-based single-cell RNA sequencing (scRNA-seq) techniques has tremendously changed biological…”
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Nuclear peripheral chromatin-lamin B1 interaction is required for global integrity of chromatin architecture and dynamics in human cells
Published in Protein & cell (01-04-2022)“…The eukaryotic genome is folded into higher-order conformation accompanied with constrained dynamics for coordinated genome functions. However, the molecular…”
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Effect of breathing phase number on the 4D robust optimization for pancreatic cancer intensity modulated proton therapy
Published in BMC cancer (30-10-2024)“…Respiratory movement, as one of the main challenges in proton therapy for pancreatic cancer patients, could not only lead to harm to normal tissues but also…”
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Tracing the expression of circular RNAs in human pre-implantation embryos
Published in Genome Biology (17-06-2016)“…PolyA- RNAs have not been widely analyzed in human pre-implantation embryos due to the scarcity of materials. In particular, circular RNA (circRNA), a novel…”
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