Search Results - "Faino, Luigi"

Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen by Faino, Luigi, Seidl, Michael F, Shi-Kunne, Xiaoqian, Pauper, Marc, van den Berg, Grardy C M, Wittenberg, Alexander H J, Thomma, Bart P H J

“…Genomic plasticity enables adaptation to changing environments, which is especially relevant for pathogens that engage in "arms races" with their hosts. In…”
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A gapless genome sequence of the fungus Botrytis cinerea by Van Kan, Jan A. L., Stassen, Joost H. M., Mosbach, Andreas, Van Der Lee, Theo A. J., Faino, Luigi, Farmer, Andrew D., Papasotiriou, Dimitrios G., Zhou, Shiguo, Seidl, Michael F., Cottam, Eleanor, Edel, Dominique, Hahn, Matthias, Schwartz, David C., Dietrich, Robert A., Widdison, Stephanie, Scalliet, Gabriel

“…Summary Following earlier incomplete and fragmented versions of a genome sequence for the grey mould Botrytis cinerea, a gapless, near‐finished genome sequence…”
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The Neolithic site "La Marmotta": DNA metabarcoding to identify the microbial deterioration of waterlogged archeological wood by Beccaccioli, Marzia, Moricca, Claudia, Faino, Luigi, Reale, Rita, Mineo, Mario, Reverberi, Massimo

“…The evaluation of biological degradation of waterlogged archeological wood is crucial to choose the conservative and protective treatments to be applied to the…”
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The Zymoseptoria tritici Avirulence Factor AvrStb6 Accumulates in Hyphae Close to Stomata and Triggers a Wheat Defense Response Hindering Fungal Penetration by Alassimone, Julien, Praz, Coraline, Lorrain, Cécile, De Francesco, Agustina, Carrasco-López, Cristian, Faino, Luigi, Shen, Ziqi, Meile, Lukas, Sánchez-Vallet, Andrea

“…, the causal agent of Septoria tritici blotch, is one of Europe's most damaging wheat pathogens, causing significant economic losses. Genetic resistance is a…”
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Evidence for Functional Diversification Within a Fungal NEP1-Like Protein Family by SANTHANAM, Parthasarathy, PETER VAN ESSE, H, ALBERT, Isabell, FAINO, Luigi, NÜRNBERGER, Thorsten, THOMMA, Bart P. H. J

“…In this study, we functionally analyzed the gene family encoding necrosis- and ethylene-inducing-like proteins (NLP) of the vascular wilt pathogen Verticillium…”
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Evolution within the fungal genus Verticillium is characterized by chromosomal rearrangement and gene loss by Shi‐Kunne, Xiaoqian, Faino, Luigi, van den Berg, Grardy C. M., Thomma, Bart P. H. J., Seidl, Michael F.

“…Summary The fungal genus Verticillium contains ten species, some of which are notorious plant pathogens causing vascular wilt diseases in host plants, while…”
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Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome by Faino, Luigi, Seidl, Michael F, Datema, Erwin, van den Berg, Grardy C M, Janssen, Antoine, Wittenberg, Alexander H J, Thomma, Bart P H J

“…Next-generation sequencing (NGS) technologies have increased the scalability, speed, and resolution of genomic sequencing and, thus, have revolutionized…”
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Analysis of Italian isolates of Pantoea stewartii subsp. stewartii and development of a real-time PCR-based diagnostic method by Scala, Valeria, Faino, Luigi, Costantini, Francesca, Crosara, Valeria, Albanese, Alessio, Pucci, Nicoletta, Reverberi, Massimo, Loreti, Stefania

“…subsp. (Pss) causes Stewart's vascular wilt of maize, and it is responsible for serious crop losses. Pss is indigenous to North America and spreads with maize…”
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Arabidopsis thaliana ambient temperature responsive lncRNAs by Severing, Edouard, Faino, Luigi, Jamge, Suraj, Busscher, Marco, Kuijer-Zhang, Yang, Bellinazzo, Francesca, Busscher-Lange, Jacqueline, Fernández, Virginia, Angenent, Gerco C, Immink, Richard G H, Pajoro, Alice

“…Long non-coding RNAs (lncRNAs) have emerged as new class of regulatory molecules in animals where they regulate gene expression at transcriptional and…”
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Draft Genome Sequence of a New Fusarium Isolate Belonging to Fusarium tricinctum Species Complex Collected From Hazelnut in Central Italy by Turco, Silvia, Grottoli, Alessandro, Drais, Mounira Inas, De Spirito, Carlo, Faino, Luigi, Reverberi, Massimo, Cristofori, Valerio, Mazzaglia, Angelo

“…In summer 2019, during a survey on the health status of a hazelnut orchard located in the Tuscia area (the province of Viterbo, Latium, Italy), nuts showing…”
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PRGdb: a bioinformatics platform for plant resistance gene analysis by Sanseverino, Walter, Roma, Guglielmo, De Simone, Marco, Faino, Luigi, Melito, Sara, Stupka, Elia, Frusciante, Luigi, Ercolano, Maria Raffaella

“…PRGdb is a web accessible open-source (http://www.prgdb.org) database that represents the first bioinformatic resource providing a comprehensive overview of…”
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Dynamic virulence‐related regions of the plant pathogenic fungus Verticillium dahliae display enhanced sequence conservation by Depotter, Jasper R. L., Shi‐Kunne, Xiaoqian, Missonnier, Hélène, Liu, Tingli, Faino, Luigi, Berg, Grardy C. M., Wood, Thomas A., Zhang, Baolong, Jacques, Alban, Seidl, Michael F., Thomma, Bart P. H. J.

“…Plant pathogens continuously evolve to evade host immune responses. During host colonization, many fungal pathogens secrete effectors to perturb such…”
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Gapless Genome Assembly of the Potato and Tomato Early Blight Pathogen Alternaria solani by Wolters, Pieter J, Faino, Luigi, van den Bosch, Trudy B M, Evenhuis, Bert, Visser, Richard G F, Seidl, Michael F, Vleeshouwers, Vivianne G A A

“…The Alternaria genus consists of saprophytic fungi as well as plant-pathogenic species that have significant economic impact. To date, the genomes of multiple…”
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The Genome of the Saprophytic Fungus Verticillium tricorpus Reveals a Complex Effector Repertoire Resembling That of Its Pathogenic Relatives by Seidl, Michael F, Faino, Luigi, Shi-Kunne, Xiaoqian, van den Berg, Grardy C M, Bolton, Melvin D, Thomma, Bart P H J

“…Vascular wilts caused by Verticillium spp. are destructive plant diseases affecting hundreds of hosts. Only a few Verticillium spp. are causal agents of…”
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The transcriptome of Verticillium dahliae-infected Nicotiana benthamiana determined by deep RNA sequencing by Faino, Luigi, de Jonge, Ronnie, Thomma, Bart P H J

“…Verticillium wilt disease is caused by fungi of the Verticillium genus that occur on a wide range of host plants, including Solanaceous species such as tomato…”
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Genetics and molecular mechanisms of resistance to powdery mildews in tomato (Solanum lycopersicum) and its wild relatives by Seifi, Alireza, Gao, Dongli, Zheng, Zheng, Pavan, Stefano, Faino, Luigi, Visser, Richard G. F, Wolters, Anne-Marie A, Bai, Yuling

“…Powdery mildews (PMs) cause disease in a wide range of plant species including important crops. Taking tomato as an example, here we review findings on the…”
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Characterization of polygenic resistance to powdery mildew in tomato at cytological, biochemical and gene expression level by LI, CHENGWEI, FAINO, LUIGI, DONG, LIN, FAN, JUNMEI, KISS, LEVENTE, DE GIOVANNI, CLAUDIO, LEBEDA, ALES, SCOTT, JOHN, MATSUDA, YOSHINORI, TOYODA, HIDEYOSHI, LINDHOUT, PIM, VISSER, RICHARD G. F., BONNEMA, GUUSJE, BAI, YULING

“…SUMMARY Extensive research in the area of plant innate immunity has increased considerably our understanding of the molecular mechanisms associated with…”
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Evolutionary Trajectories toward Ceftazidime-Avibactam Resistance in Klebsiella pneumoniae Clinical Isolates by Carattoli, Alessandra, Arcari, Gabriele, Bibbolino, Giulia, Sacco, Federica, Tomolillo, Dario, Di Lella, Federica Maria, Trancassini, Maria, Faino, Luigi, Venditti, Mario, Antonelli, Guido, Raponi, Giammarco

“…From January 2019 to April 2020, 32 KPC-producing, ceftazidime-avibactam (CZA)-resistant Klebsiella pneumoniae strains were isolated in a university hospital…”
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A Multispecies Cluster of VIM-1 Carbapenemase-Producing Enterobacterales Linked by a Novel, Highly Conjugative, and Broad-Host-Range IncA Plasmid Forebodes the Reemergence of VIM-1 by Arcari, Gabriele, Di Lella, Federica Maria, Bibbolino, Giulia, Mengoni, Fabio, Beccaccioli, Marzia, Antonelli, Guido, Faino, Luigi, Carattoli, Alessandra

“…In this study, we investigated VIM-1-producing , , , , and strains, isolated in 2019 during a period of active surveillance of carbapenem-resistant in a large…”
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Nanopore sequencing for the detection and identification of Xylella fastidiosa subspecies and sequence types from naturally infected plant material by Faino, Luigi, Scala, Valeria, Albanese, Alessio, Modesti, Vanessa, Grottoli, Alessandro, Pucci, Nicoletta, Doddi, Andrea, L’Aurora, Alessia, Tatulli, Giuseppe, Reverberi, Massimo, Loreti, Stefania

“…Xylella fastidiosa (Xf) is a gram‐negative bacterial plant pathogen that can infect over 500 plant species. While it is endemic in America, X. fastidiosa…”
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